RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 GPTP24298 496 aa22.51■■□□□ 1.19
COL16A1-215ENST00000488897 TBC1D9Q6ZT07 1266 aa22.51■■□□□ 1.19
COL16A1-215ENST00000488897 HYPKQ9NX55 129 aa22.51■■□□□ 1.19
COL16A1-215ENST00000488897 COL15A1P39059 1388 aa22.5■■□□□ 1.19
COL16A1-215ENST00000488897 TRAPPC3LQ5T215 181 aa22.5■■□□□ 1.19
COL16A1-215ENST00000488897 PNPLA7Q6ZV29 1317 aa22.5■■□□□ 1.19
COL16A1-215ENST00000488897 IL6STP40189 918 aaPredicted RBP22.5■■□□□ 1.19
COL16A1-215ENST00000488897 CCDC24Q8N4L8 307 aa22.5■■□□□ 1.19
COL16A1-215ENST00000488897 KIF2CQ99661 725 aa22.5■■□□□ 1.19
COL16A1-215ENST00000488897 ANKRD13DQ6ZTN6 518 aa22.49■■□□□ 1.19
COL16A1-215ENST00000488897 RIC3Q7Z5B4 369 aa22.49■■□□□ 1.19
COL16A1-215ENST00000488897 CWF19L2Q2TBE0 894 aaKnown RBP22.49■■□□□ 1.19
COL16A1-215ENST00000488897 CDC45O75419 566 aa22.48■■□□□ 1.19
COL16A1-215ENST00000488897 RFC4P35249 363 aa22.48■■□□□ 1.19
COL16A1-215ENST00000488897 RC3H1Q5TC82 1133 aaKnown RBP22.48■■□□□ 1.19
COL16A1-215ENST00000488897 ADCY9O60503 1353 aa22.48■■□□□ 1.19
COL16A1-215ENST00000488897 NUP188Q5SRE5 1749 aa22.48■■□□□ 1.19
COL16A1-215ENST00000488897 XRCC6P12956 609 aaKnown RBP eCLIP22.48■■□□□ 1.19
COL16A1-215ENST00000488897 GZF1Q9H116 711 aaPredicted RBP22.48■■□□□ 1.19
COL16A1-215ENST00000488897 BCL2L12Q9HB09 334 aa22.48■■□□□ 1.19
COL16A1-215ENST00000488897 STK32BQ9NY57 414 aa22.48■■□□□ 1.19
COL16A1-215ENST00000488897 INTS3Q68E01 1043 aaKnown RBP22.47■■□□□ 1.19
COL16A1-215ENST00000488897 MYD88Q99836 296 aa22.47■■□□□ 1.19
COL16A1-215ENST00000488897 DCTPP1Q9H773 170 aa22.47■■□□□ 1.19
COL16A1-215ENST00000488897 TUBGCP6Q96RT7 1819 aa22.46■■□□□ 1.19
COL16A1-215ENST00000488897 CAMTA2O94983 1202 aa22.46■■□□□ 1.19
COL16A1-215ENST00000488897 GBP4Q96PP9 640 aa22.46■■□□□ 1.19
COL16A1-215ENST00000488897 ISY1Q9ULR0 285 aaKnown RBP22.46■■□□□ 1.19
COL16A1-215ENST00000488897 UBR3Q6ZT12 1888 aa22.46■■□□□ 1.19
COL16A1-215ENST00000488897 PTMSP20962 102 aa22.46■■□□□ 1.19
COL16A1-215ENST00000488897 SYNE4Q8N205 404 aa22.46■■□□□ 1.19
COL16A1-215ENST00000488897 K7ELQ4 463 aaPredicted RBP22.45■■□□□ 1.18
COL16A1-215ENST00000488897 RAB3GAP1Q15042 981 aa22.45■■□□□ 1.18
COL16A1-215ENST00000488897 TNPO1Q92973 898 aaKnown RBP22.45■■□□□ 1.18
COL16A1-215ENST00000488897 RREB1Q92766 1687 aa22.44■■□□□ 1.18
COL16A1-215ENST00000488897 ZBTB7AO95365 584 aa22.44■■□□□ 1.18
COL16A1-215ENST00000488897 HSP90AA1P07900 732 aaKnown RBP22.44■■□□□ 1.18
COL16A1-215ENST00000488897 MRE11P49959 708 aa22.43■■□□□ 1.18
COL16A1-215ENST00000488897 TBC1D9BQ66K14 1250 aa22.43■■□□□ 1.18
COL16A1-215ENST00000488897 PLEKHM2Q8IWE5 1019 aa22.43■■□□□ 1.18
COL16A1-215ENST00000488897 ZPR1O75312 459 aa22.43■■□□□ 1.18
COL16A1-215ENST00000488897 KSR2Q6VAB6 950 aa22.43■■□□□ 1.18
COL16A1-215ENST00000488897 KIF6Q6ZMV9 814 aa22.43■■□□□ 1.18
COL16A1-215ENST00000488897 RPAP2Q8IXW5 612 aaPredicted RBP22.42■■□□□ 1.18
COL16A1-215ENST00000488897 MAP3K15Q6ZN16 1313 aa22.42■■□□□ 1.18
COL16A1-215ENST00000488897 ZNF831Q5JPB2 1677 aa22.42■■□□□ 1.18
COL16A1-215ENST00000488897 IGKV5-2P06315 115 aa22.42■■□□□ 1.18
COL16A1-215ENST00000488897 ANKRD44Q8N8A2 993 aa22.42■■□□□ 1.18
COL16A1-215ENST00000488897 DNAAF4Q8WXU2 420 aa22.42■■□□□ 1.18
COL16A1-215ENST00000488897 ATF5Q9Y2D1 282 aaPredicted RBP22.42■■□□□ 1.18
COL16A1-215ENST00000488897 GYS1P13807 737 aa22.41■■□□□ 1.18
COL16A1-215ENST00000488897 SKOR2Q2VWA4 1001 aaPredicted RBP22.41■■□□□ 1.18
COL16A1-215ENST00000488897 PLBD2Q8NHP8 589 aa22.41■■□□□ 1.18
COL16A1-215ENST00000488897 ERBB4Q15303 1308 aa22.41■■□□□ 1.18
COL16A1-215ENST00000488897 SSFA2P28290 1259 aa22.4■■□□□ 1.18
COL16A1-215ENST00000488897 GSPT1P15170 499 aaKnown RBP22.4■■□□□ 1.18
COL16A1-215ENST00000488897 NARFQ9UHQ1 456 aa22.4■■□□□ 1.18
COL16A1-215ENST00000488897 USP42Q9H9J4 1324 aaKnown RBP22.4■■□□□ 1.18
COL16A1-215ENST00000488897 TTC22Q5TAA0 569 aa22.39■■□□□ 1.18
COL16A1-215ENST00000488897 PTPRCP08575 1304 aa22.39■■□□□ 1.18
COL16A1-215ENST00000488897 RGPD3A6NKT7 1758 aaPredicted RBP22.39■■□□□ 1.17
COL16A1-215ENST00000488897 RGPD4Q7Z3J3 1758 aa22.39■■□□□ 1.17
COL16A1-215ENST00000488897 C4AP0C0L4 1744 aa22.39■■□□□ 1.17
COL16A1-215ENST00000488897 UBN2Q6ZU65 1347 aa22.39■■□□□ 1.17
COL16A1-215ENST00000488897 SOCS7O14512 581 aa22.39■■□□□ 1.17
COL16A1-215ENST00000488897 CICQ96RK0 1608 aaPredicted RBP22.38■■□□□ 1.17
COL16A1-215ENST00000488897 CD2BP2O95400 341 aaKnown RBP22.38■■□□□ 1.17
COL16A1-215ENST00000488897 NIP7Q9Y221 180 aaKnown RBP eCLIP22.38■■□□□ 1.17
COL16A1-215ENST00000488897 GIGYF2Q6Y7W6 1299 aaKnown RBP22.38■■□□□ 1.17
COL16A1-215ENST00000488897 NUTM1Q86Y26 1132 aa22.38■■□□□ 1.17
COL16A1-215ENST00000488897 DDX58O95786 925 aaKnown RBP22.37■■□□□ 1.17
COL16A1-215ENST00000488897 BEND3Q5T5X7 828 aa22.37■■□□□ 1.17
COL16A1-215ENST00000488897 METTL22Q9BUU2 404 aaPredicted RBP22.37■■□□□ 1.17
COL16A1-215ENST00000488897 RABEP1Q15276 862 aa22.37■■□□□ 1.17
COL16A1-215ENST00000488897 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.37■■□□□ 1.17
COL16A1-215ENST00000488897 ATP10DQ9P241 1426 aa22.36■■□□□ 1.17
COL16A1-215ENST00000488897 NFIXQ14938 502 aa22.36■■□□□ 1.17
COL16A1-215ENST00000488897 CEP85Q6P2H3 762 aa22.36■■□□□ 1.17
COL16A1-215ENST00000488897 FAM89AQ96GI7 184 aa22.36■■□□□ 1.17
COL16A1-215ENST00000488897 TCIRG1Q13488 830 aa22.35■■□□□ 1.17
COL16A1-215ENST00000488897 SUSD4Q5VX71 490 aa22.35■■□□□ 1.17
COL16A1-215ENST00000488897 GRPEL1Q9HAV7 217 aa22.35■■□□□ 1.17
COL16A1-215ENST00000488897 RRAGDQ9NQL2 400 aaPredicted RBP22.35■■□□□ 1.17
COL16A1-215ENST00000488897 NUP98P52948 1817 aa22.34■■□□□ 1.17
COL16A1-215ENST00000488897 ARFGEF2Q9Y6D5 1785 aa22.34■■□□□ 1.17
COL16A1-215ENST00000488897 NBPF7P0C2Y1 421 aaPredicted RBP22.34■■□□□ 1.17
COL16A1-215ENST00000488897 PANK2Q9BZ23 570 aa22.34■■□□□ 1.17
COL16A1-215ENST00000488897 NEURL1BA8MQ27 555 aa22.33■■□□□ 1.17
COL16A1-215ENST00000488897 CCDC85AQ96PX6 553 aaPredicted RBP22.33■■□□□ 1.17
COL16A1-215ENST00000488897 MEIS3Q99687 375 aa22.33■■□□□ 1.17
COL16A1-215ENST00000488897 DDR1Q08345 913 aa22.33■■□□□ 1.17
COL16A1-215ENST00000488897 CASC1Q6TDU7 716 aa22.33■■□□□ 1.17
COL16A1-215ENST00000488897 CLEC17AQ6ZS10 378 aa22.32■■□□□ 1.16
COL16A1-215ENST00000488897 CHMP4AQ9BY43 222 aa22.32■■□□□ 1.16
COL16A1-215ENST00000488897 FOXD4L1Q9NU39 408 aa22.32■■□□□ 1.16
COL16A1-215ENST00000488897 CACNA1FO60840 1977 aa22.32■■□□□ 1.16
COL16A1-215ENST00000488897 A0A087WZG4 1122 aa22.32■■□□□ 1.16
COL16A1-215ENST00000488897 GOLGA6L22H0YM25 854 aa22.32■■□□□ 1.16
COL16A1-215ENST00000488897 C16orf71Q8IYS4 520 aaPredicted RBP22.32■■□□□ 1.16
COL16A1-215ENST00000488897 USP26Q9BXU7 913 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms