RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TCERG1O14776 1098 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-209ENST00000488627 EXOSC9Q06265 439 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-209ENST00000488627 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
CTDSP1-209ENST00000488627 TRIM28Q13263 835 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-209ENST00000488627 C9orf131Q5VYM1 1079 aa20.56■□□□□ 0.88
CTDSP1-209ENST00000488627 RIC1Q4ADV7 1423 aa20.55■□□□□ 0.88
CTDSP1-209ENST00000488627 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
CTDSP1-209ENST00000488627 NFKBIEO00221 500 aa20.55■□□□□ 0.88
CTDSP1-209ENST00000488627 HOXA10P31260 410 aaPredicted RBP20.55■□□□□ 0.88
CTDSP1-209ENST00000488627 RASSF7Q02833 373 aa20.55■□□□□ 0.88
CTDSP1-209ENST00000488627 DIEXFQ68CQ4 756 aaKnown RBP20.55■□□□□ 0.88
CTDSP1-209ENST00000488627 RNF123Q5XPI4 1314 aa20.54■□□□□ 0.88
CTDSP1-209ENST00000488627 DLEC1Q9Y238 1755 aa20.54■□□□□ 0.88
CTDSP1-209ENST00000488627 COL11A2P13942 1736 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-209ENST00000488627 RIC3Q7Z5B4 369 aa20.54■□□□□ 0.88
CTDSP1-209ENST00000488627 MYH16Q9H6N6 1097 aa20.54■□□□□ 0.88
CTDSP1-209ENST00000488627 ZNF219Q9P2Y4 722 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-209ENST00000488627 ARFGEF1Q9Y6D6 1849 aa20.54■□□□□ 0.88
CTDSP1-209ENST00000488627 G2E3Q7L622 706 aa20.53■□□□□ 0.88
CTDSP1-209ENST00000488627 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
CTDSP1-209ENST00000488627 TRMT112Q9UI30 125 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-209ENST00000488627 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
CTDSP1-209ENST00000488627 ALDH1B1P30837 517 aa20.52■□□□□ 0.88
CTDSP1-209ENST00000488627 MIER1Q8N108 512 aa20.52■□□□□ 0.88
CTDSP1-209ENST00000488627 NLRP3Q96P20 1036 aa20.52■□□□□ 0.88
CTDSP1-209ENST00000488627 STK31Q9BXU1 1019 aa20.52■□□□□ 0.88
CTDSP1-209ENST00000488627 HCLS1P14317 486 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-209ENST00000488627 METTL22Q9BUU2 404 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-209ENST00000488627 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
CTDSP1-209ENST00000488627 SH3TC1Q8TE82 1336 aa20.51■□□□□ 0.87
CTDSP1-209ENST00000488627 LMNB1P20700 586 aa20.5■□□□□ 0.87
CTDSP1-209ENST00000488627 OLFM4Q6UX06 510 aa20.5■□□□□ 0.87
CTDSP1-209ENST00000488627 KSR2Q6VAB6 950 aa20.5■□□□□ 0.87
CTDSP1-209ENST00000488627 CRAMP1Q96RY5 1269 aa20.5■□□□□ 0.87
CTDSP1-209ENST00000488627 TNRC6CQ9HCJ0 1690 aaKnown RBP20.49■□□□□ 0.87
CTDSP1-209ENST00000488627 PI4KAP2A4QPH2 592 aa20.49■□□□□ 0.87
CTDSP1-209ENST00000488627 DDX58O95786 925 aaKnown RBP20.49■□□□□ 0.87
CTDSP1-209ENST00000488627 SOGA3Q5TF21 947 aa20.49■□□□□ 0.87
CTDSP1-209ENST00000488627 PI4KAP1Q8N8J0 262 aa20.49■□□□□ 0.87
CTDSP1-209ENST00000488627 FAM89AQ96GI7 184 aa20.49■□□□□ 0.87
CTDSP1-209ENST00000488627 MYD88Q99836 296 aa20.49■□□□□ 0.87
CTDSP1-209ENST00000488627 MAP3K2Q9Y2U5 619 aa20.49■□□□□ 0.87
CTDSP1-209ENST00000488627 LTBP3Q9NS15 1303 aa20.49■□□□□ 0.87
CTDSP1-209ENST00000488627 SLX4Q8IY92 1834 aa20.48■□□□□ 0.87
CTDSP1-209ENST00000488627 RPGRQ92834 1020 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-209ENST00000488627 SLFN5Q08AF3 891 aa20.47■□□□□ 0.87
CTDSP1-209ENST00000488627 CCDC191Q8NCU4 936 aa20.47■□□□□ 0.87
CTDSP1-209ENST00000488627 ZNF526Q8TF50 670 aaPredicted RBP20.47■□□□□ 0.87
CTDSP1-209ENST00000488627 RBM17Q96I25 401 aaKnown RBP20.47■□□□□ 0.87
CTDSP1-209ENST00000488627 GPBP1L1Q9HC44 474 aaPredicted RBP20.47■□□□□ 0.87
CTDSP1-209ENST00000488627 E9PSI1 815 aa20.46■□□□□ 0.87
CTDSP1-209ENST00000488627 IGKV5-2P06315 115 aa20.46■□□□□ 0.87
CTDSP1-209ENST00000488627 FLIIQ13045 1269 aa20.46■□□□□ 0.87
CTDSP1-209ENST00000488627 CCDC93Q567U6 631 aa20.46■□□□□ 0.87
CTDSP1-209ENST00000488627 SLC51AQ86UW1 340 aa20.46■□□□□ 0.87
CTDSP1-209ENST00000488627 ZBTB38Q8NAP3 1195 aaPredicted RBP20.46■□□□□ 0.87
CTDSP1-209ENST00000488627 TAOK3Q9H2K8 898 aa20.46■□□□□ 0.87
CTDSP1-209ENST00000488627 RTL5Q5HYW3 569 aaPredicted RBP20.45■□□□□ 0.86
CTDSP1-209ENST00000488627 CDCA7LQ96GN5 454 aa20.45■□□□□ 0.86
CTDSP1-209ENST00000488627 SNED1Q8TER0 1413 aa20.44■□□□□ 0.86
CTDSP1-209ENST00000488627 SF3B3Q15393 1217 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-209ENST00000488627 TRMT2AQ8IZ69 625 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-209ENST00000488627 RTKN2Q8IZC4 609 aa20.44■□□□□ 0.86
CTDSP1-209ENST00000488627 IRS4O14654 1257 aaPredicted RBP20.43■□□□□ 0.86
CTDSP1-209ENST00000488627 PCCAP05165 728 aaPredicted RBP20.43■□□□□ 0.86
CTDSP1-209ENST00000488627 CC2D2BQ6DHV5 1058 aa20.43■□□□□ 0.86
CTDSP1-209ENST00000488627 CWC25Q9NXE8 425 aaPredicted RBP20.43■□□□□ 0.86
CTDSP1-209ENST00000488627 ABCC4O15439 1325 aa20.43■□□□□ 0.86
CTDSP1-209ENST00000488627 ZC3H4Q9UPT8 1303 aaKnown RBP20.43■□□□□ 0.86
CTDSP1-209ENST00000488627 ANKRD36CQ5JPF3 1778 aa20.42■□□□□ 0.86
CTDSP1-209ENST00000488627 KIF3CO14782 793 aa20.42■□□□□ 0.86
CTDSP1-209ENST00000488627 FKBP4Q02790 459 aaKnown RBP eCLIP20.42■□□□□ 0.863e-6■■■■□ 20.1
CTDSP1-209ENST00000488627 NEURL1BA8MQ27 555 aa20.41■□□□□ 0.86
CTDSP1-209ENST00000488627 PPEF1O14829 653 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-209ENST00000488627 BBOX1O75936 387 aa20.41■□□□□ 0.86
CTDSP1-209ENST00000488627 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-209ENST00000488627 CWF19L2Q2TBE0 894 aaKnown RBP20.41■□□□□ 0.86
CTDSP1-209ENST00000488627 JARID2Q92833 1246 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-209ENST00000488627 DDX46Q7L014 1031 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-209ENST00000488627 PSMD1Q99460 953 aa20.4■□□□□ 0.86
CTDSP1-209ENST00000488627 NMRK2Q9NPI5 230 aa20.4■□□□□ 0.86
CTDSP1-209ENST00000488627 ZNF277Q9NRM2 450 aaPredicted RBP20.4■□□□□ 0.86
CTDSP1-209ENST00000488627 ATP6V0A2Q9Y487 856 aa20.4■□□□□ 0.86
CTDSP1-209ENST00000488627 ARFGEF2Q9Y6D5 1785 aa20.39■□□□□ 0.86
CTDSP1-209ENST00000488627 NEXNQ0ZGT2 675 aa20.39■□□□□ 0.85
CTDSP1-209ENST00000488627 GRAPQ13588 217 aa20.39■□□□□ 0.85
CTDSP1-209ENST00000488627 GRAPLQ8TC17 118 aaPredicted RBP20.39■□□□□ 0.85
CTDSP1-209ENST00000488627 DNAAF4Q8WXU2 420 aa20.39■□□□□ 0.85
CTDSP1-209ENST00000488627 SBF1O95248 1867 aa20.39■□□□□ 0.85
CTDSP1-209ENST00000488627 FER1L6Q2WGJ9 1857 aa20.39■□□□□ 0.85
CTDSP1-209ENST00000488627 GLTPD2A6NH11 291 aa20.38■□□□□ 0.85
CTDSP1-209ENST00000488627 C1QTNF8P60827 252 aa20.38■□□□□ 0.85
CTDSP1-209ENST00000488627 GRIPAP1Q4V328 841 aa20.38■□□□□ 0.85
CTDSP1-209ENST00000488627 SP8Q8IXZ3 490 aa20.38■□□□□ 0.85
CTDSP1-209ENST00000488627 CDHR2Q9BYE9 1310 aa20.37■□□□□ 0.85
CTDSP1-209ENST00000488627 F6X3S4 739 aa20.37■□□□□ 0.85
CTDSP1-209ENST00000488627 H7C1W4 665 aa20.37■□□□□ 0.85
CTDSP1-209ENST00000488627 CELF1Q92879 486 aaKnown RBP20.37■□□□□ 0.85
CTDSP1-209ENST00000488627 KDM2BQ8NHM5 1336 aa20.36■□□□□ 0.85
CTDSP1-209ENST00000488627 PDE8AO60658 829 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms