RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 C21orf2O43822 256 aa11.35□□□□□ -0.59
PRKCB-208ENST00000487674 VEGFAP15692 232 aaPredicted RBP11.35□□□□□ -0.59
PRKCB-208ENST00000487674 PIP4K2AP48426 406 aaPredicted RBP11.35□□□□□ -0.59
PRKCB-208ENST00000487674 DCTN1Q14203 1278 aa11.35□□□□□ -0.59
PRKCB-208ENST00000487674 SOGA3Q5TF21 947 aa11.35□□□□□ -0.59
PRKCB-208ENST00000487674 PRPF40BQ6NWY9 871 aaKnown RBP11.35□□□□□ -0.59
PRKCB-208ENST00000487674 CNKSR1Q969H4 720 aa11.35□□□□□ -0.59
PRKCB-208ENST00000487674 TAOK3Q9H2K8 898 aa11.35□□□□□ -0.59
PRKCB-208ENST00000487674 NEFMP07197 916 aa11.34□□□□□ -0.59
PRKCB-208ENST00000487674 SRGNP10124 158 aa11.34□□□□□ -0.59
PRKCB-208ENST00000487674 NBPF5PQ86XG9 351 aaPredicted RBP11.34□□□□□ -0.59
PRKCB-208ENST00000487674 KLRG1Q96E93 195 aa11.34□□□□□ -0.59
PRKCB-208ENST00000487674 MASTLQ96GX5 879 aa11.34□□□□□ -0.59
PRKCB-208ENST00000487674 NBPF26B4DH59 902 aa11.33□□□□□ -0.6
PRKCB-208ENST00000487674 HTRA3P83110 453 aa11.33□□□□□ -0.6
PRKCB-208ENST00000487674 TAF7Q15545 349 aaPredicted RBP11.33□□□□□ -0.6
PRKCB-208ENST00000487674 ERFEQ4G0M1 354 aa11.33□□□□□ -0.6
PRKCB-208ENST00000487674 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
PRKCB-208ENST00000487674 NBPF10Q6P3W6 841 aaKnown RBP11.33□□□□□ -0.6
PRKCB-208ENST00000487674 NBPF15Q8N660 670 aa11.33□□□□□ -0.6
PRKCB-208ENST00000487674 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
PRKCB-208ENST00000487674 SEC24BO95487 1268 aa11.32□□□□□ -0.6
PRKCB-208ENST00000487674 JMYQ8N9B5 988 aa11.32□□□□□ -0.6
PRKCB-208ENST00000487674 PNISRQ8TF01 805 aaKnown RBP11.32□□□□□ -0.6
PRKCB-208ENST00000487674 ZBTB47Q9UFB7 747 aaPredicted RBP11.32□□□□□ -0.6
PRKCB-208ENST00000487674 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
PRKCB-208ENST00000487674 NIP7Q9Y221 180 aaKnown RBP eCLIP11.32□□□□□ -0.6
PRKCB-208ENST00000487674 NUP98P52948 1817 aa11.31□□□□□ -0.6
PRKCB-208ENST00000487674 KLRG2A4D1S0 409 aaPredicted RBP11.31□□□□□ -0.6
PRKCB-208ENST00000487674 NPR1P16066 1061 aa11.31□□□□□ -0.6
PRKCB-208ENST00000487674 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
PRKCB-208ENST00000487674 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
PRKCB-208ENST00000487674 POTECB2RU33 542 aa11.3□□□□□ -0.6
PRKCB-208ENST00000487674 NFE2L2Q16236 605 aa11.3□□□□□ -0.6
PRKCB-208ENST00000487674 CCDC93Q567U6 631 aa11.3□□□□□ -0.6
PRKCB-208ENST00000487674 C7orf43Q8WVR3 580 aa11.3□□□□□ -0.6
PRKCB-208ENST00000487674 PLEKHF1Q96S99 279 aa11.3□□□□□ -0.6
PRKCB-208ENST00000487674 MIS18AQ9NYP9 233 aa11.3□□□□□ -0.6
PRKCB-208ENST00000487674 SCN4AP35499 1836 aa11.3□□□□□ -0.6
PRKCB-208ENST00000487674 IBTKQ9P2D0 1353 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-208ENST00000487674 RIC1Q4ADV7 1423 aa11.29□□□□□ -0.6
PRKCB-208ENST00000487674 HLFQ16534 295 aa11.29□□□□□ -0.6
PRKCB-208ENST00000487674 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
PRKCB-208ENST00000487674 MAPK8IP3Q9UPT6 1336 aa11.29□□□□□ -0.6
PRKCB-208ENST00000487674 ERVV-1B6SEH8 477 aa11.28□□□□□ -0.6
PRKCB-208ENST00000487674 EIF4A1P60842 406 aaKnown RBP11.28□□□□□ -0.6
PRKCB-208ENST00000487674 KIF6Q6ZMV9 814 aa11.28□□□□□ -0.6
PRKCB-208ENST00000487674 NYXQ9GZU5 481 aa11.28□□□□□ -0.6
PRKCB-208ENST00000487674 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
PRKCB-208ENST00000487674 MAP3K15Q6ZN16 1313 aa11.28□□□□□ -0.6
PRKCB-208ENST00000487674 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
PRKCB-208ENST00000487674 IQCA1LA6NCM1 817 aa11.27□□□□□ -0.61
PRKCB-208ENST00000487674 FAM177BA6PVY3 158 aa11.27□□□□□ -0.61
PRKCB-208ENST00000487674 DDNO94850 711 aaPredicted RBP11.27□□□□□ -0.61
PRKCB-208ENST00000487674 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.61
PRKCB-208ENST00000487674 FKBP4Q02790 459 aaKnown RBP eCLIP11.27□□□□□ -0.61
PRKCB-208ENST00000487674 CRY2Q49AN0 593 aa11.27□□□□□ -0.61
PRKCB-208ENST00000487674 RTKN2Q8IZC4 609 aa11.27□□□□□ -0.61
PRKCB-208ENST00000487674 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
PRKCB-208ENST00000487674 THUMPD2Q9BTF0 503 aaKnown RBP11.27□□□□□ -0.61
PRKCB-208ENST00000487674 ERBB4Q15303 1308 aa11.27□□□□□ -0.61
PRKCB-208ENST00000487674 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
PRKCB-208ENST00000487674 ALDH1B1P30837 517 aa11.26□□□□□ -0.61
PRKCB-208ENST00000487674 IER5LQ5T953 404 aa11.26□□□□□ -0.61
PRKCB-208ENST00000487674 FAM212AQ96EL1 285 aa11.26□□□□□ -0.61
PRKCB-208ENST00000487674 TTLL7Q6ZT98 887 aa11.25□□□□□ -0.61
PRKCB-208ENST00000487674 NGEFQ8N5V2 710 aa11.25□□□□□ -0.61
PRKCB-208ENST00000487674 ZNF277Q9NRM2 450 aaPredicted RBP11.25□□□□□ -0.61
PRKCB-208ENST00000487674 RRP7AQ9Y3A4 280 aaKnown RBP11.25□□□□□ -0.61
PRKCB-208ENST00000487674 UBN2Q6ZU65 1347 aa11.25□□□□□ -0.61
PRKCB-208ENST00000487674 ZNF541Q9H0D2 1346 aa11.25□□□□□ -0.61
PRKCB-208ENST00000487674 ANKRD36CQ5JPF3 1778 aa11.25□□□□□ -0.61
PRKCB-208ENST00000487674 ADAMTSL1Q8N6G6 1762 aa11.25□□□□□ -0.61
PRKCB-208ENST00000487674 MYL6BP14649 208 aa11.24□□□□□ -0.61
PRKCB-208ENST00000487674 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
PRKCB-208ENST00000487674 LDHDQ86WU2 507 aa11.24□□□□□ -0.61
PRKCB-208ENST00000487674 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
PRKCB-208ENST00000487674 PSMD1Q99460 953 aa11.24□□□□□ -0.61
PRKCB-208ENST00000487674 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
PRKCB-208ENST00000487674 ZBTB3Q9H5J0 574 aa11.24□□□□□ -0.61
PRKCB-208ENST00000487674 TSPYL4Q9UJ04 414 aa11.24□□□□□ -0.61
PRKCB-208ENST00000487674 GPTP24298 496 aa11.23□□□□□ -0.61
PRKCB-208ENST00000487674 IARSP41252 1262 aaKnown RBP11.23□□□□□ -0.61
PRKCB-208ENST00000487674 LMOD3Q0VAK6 560 aa11.23□□□□□ -0.61
PRKCB-208ENST00000487674 RALBP1Q15311 655 aa11.23□□□□□ -0.61
PRKCB-208ENST00000487674 CC2D2BQ6DHV5 1058 aa11.23□□□□□ -0.61
PRKCB-208ENST00000487674 RPGRQ92834 1020 aaKnown RBP11.23□□□□□ -0.61
PRKCB-208ENST00000487674 TAF1DQ9H5J8 278 aaPredicted RBP11.23□□□□□ -0.61
PRKCB-208ENST00000487674 BABAM1Q9NWV8 329 aa11.23□□□□□ -0.61
PRKCB-208ENST00000487674 FZD9O00144 591 aa11.22□□□□□ -0.61
PRKCB-208ENST00000487674 NTSR2O95665 410 aa11.22□□□□□ -0.61
PRKCB-208ENST00000487674 HOXA10P31260 410 aaPredicted RBP11.22□□□□□ -0.61
PRKCB-208ENST00000487674 GRIPAP1Q4V328 841 aa11.22□□□□□ -0.61
PRKCB-208ENST00000487674 PARP10Q53GL7 1025 aa11.22□□□□□ -0.61
PRKCB-208ENST00000487674 GIGYF2Q6Y7W6 1299 aaKnown RBP11.22□□□□□ -0.61
PRKCB-208ENST00000487674 ZNF34Q8IZ26 560 aa11.22□□□□□ -0.61
PRKCB-208ENST00000487674 HACL1Q9UJ83 578 aa11.22□□□□□ -0.61
PRKCB-208ENST00000487674 COL4A5P29400 1685 aa11.21□□□□□ -0.61
PRKCB-208ENST00000487674 RNF123Q5XPI4 1314 aa11.21□□□□□ -0.61
PRKCB-208ENST00000487674 PASKQ96RG2 1323 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms