RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 RBM46Q8TBY0 533 aaKnown RBP29.19■■■□□ 2.26
SRM-205ENST00000487300 CHPF2Q9P2E5 772 aa29.19■■■□□ 2.26
SRM-205ENST00000487300 ALDH1B1P30837 517 aa29.18■■■□□ 2.26
SRM-205ENST00000487300 HDGFL1Q5TGJ6 251 aa29.18■■■□□ 2.26
SRM-205ENST00000487300 PPP1R42Q7Z4L9 355 aa29.18■■■□□ 2.26
SRM-205ENST00000487300 RRAGCQ9HB90 399 aa29.17■■■□□ 2.26
SRM-205ENST00000487300 SCN4AP35499 1836 aa29.17■■■□□ 2.26
SRM-205ENST00000487300 CALD1Q05682 793 aaKnown RBP29.16■■■□□ 2.26
SRM-205ENST00000487300 HSP90AB3PQ58FF7 597 aa29.16■■■□□ 2.26
SRM-205ENST00000487300 GNAI1P63096 354 aa29.15■■■□□ 2.26
SRM-205ENST00000487300 SLC10A5Q5PT55 438 aa29.15■■■□□ 2.26
SRM-205ENST00000487300 DUSP27Q5VZP5 1158 aa29.15■■■□□ 2.26
SRM-205ENST00000487300 DBF4Q9UBU7 674 aaPredicted RBP29.15■■■□□ 2.26
SRM-205ENST00000487300 FKBP4Q02790 459 aaKnown RBP eCLIP29.14■■■□□ 2.26
SRM-205ENST00000487300 OLFM4Q6UX06 510 aa29.14■■■□□ 2.26
SRM-205ENST00000487300 C3orf67Q6ZVT6 689 aa29.14■■■□□ 2.26
SRM-205ENST00000487300 NLRP10Q86W26 655 aa29.14■■■□□ 2.26
SRM-205ENST00000487300 TAF1P21675 1872 aa29.13■■■□□ 2.25
SRM-205ENST00000487300 AIMP1Q12904 312 aaKnown RBP29.13■■■□□ 2.25
SRM-205ENST00000487300 TCIRG1Q13488 830 aa29.13■■■□□ 2.25
SRM-205ENST00000487300 LRRC37AA6NMS7 1700 aa29.13■■■□□ 2.25
SRM-205ENST00000487300 POTECB2RU33 542 aa29.12■■■□□ 2.25
SRM-205ENST00000487300 RTKN2Q8IZC4 609 aa29.12■■■□□ 2.25
SRM-205ENST00000487300 CRAMP1Q96RY5 1269 aa29.12■■■□□ 2.25
SRM-205ENST00000487300 UTP14AQ9BVJ6 771 aaKnown RBP29.12■■■□□ 2.25
SRM-205ENST00000487300 VEGFAP15692 232 aaPredicted RBP29.11■■■□□ 2.25
SRM-205ENST00000487300 FSTL1Q12841 308 aa29.11■■■□□ 2.25
SRM-205ENST00000487300 CCDC27Q2M243 656 aa29.11■■■□□ 2.25
SRM-205ENST00000487300 C16orf71Q8IYS4 520 aaPredicted RBP29.11■■■□□ 2.25
SRM-205ENST00000487300 PLBD2Q8NHP8 589 aa29.11■■■□□ 2.25
SRM-205ENST00000487300 RPGRQ92834 1020 aaKnown RBP29.11■■■□□ 2.25
SRM-205ENST00000487300 COL4A5P29400 1685 aa29.1■■■□□ 2.25
SRM-205ENST00000487300 DPY19L2Q6NUT2 758 aa29.09■■■□□ 2.25
SRM-205ENST00000487300 PSMD1Q99460 953 aa29.09■■■□□ 2.25
SRM-205ENST00000487300 HYPKQ9NX55 129 aa29.09■■■□□ 2.25
SRM-205ENST00000487300 NCBP3Q53F19 620 aaKnown RBP29.08■■■□□ 2.25
SRM-205ENST00000487300 CC2D2BQ6DHV5 1058 aa29.08■■■□□ 2.25
SRM-205ENST00000487300 APLP1P51693 650 aa29.07■■■□□ 2.24
SRM-205ENST00000487300 NLRP3Q96P20 1036 aa29.07■■■□□ 2.24
SRM-205ENST00000487300 CACNA1FO60840 1977 aa29.06■■■□□ 2.24
SRM-205ENST00000487300 ANKRD13DQ6ZTN6 518 aa29.06■■■□□ 2.24
SRM-205ENST00000487300 RBM17Q96I25 401 aaKnown RBP29.06■■■□□ 2.24
SRM-205ENST00000487300 ISCA1Q9BUE6 129 aa29.06■■■□□ 2.24
SRM-205ENST00000487300 ZNF277Q9NRM2 450 aaPredicted RBP29.06■■■□□ 2.24
SRM-205ENST00000487300 C8orf58Q8NAV2 365 aa29.05■■■□□ 2.24
SRM-205ENST00000487300 ADAMTSL1Q8N6G6 1762 aa29.05■■■□□ 2.24
SRM-205ENST00000487300 SH3TC1Q8TE82 1336 aa29.04■■■□□ 2.24
SRM-205ENST00000487300 ANP32CO43423 234 aa29.04■■■□□ 2.24
SRM-205ENST00000487300 GRIPAP1Q4V328 841 aa29.04■■■□□ 2.24
SRM-205ENST00000487300 MRS2Q9HD23 443 aa29.04■■■□□ 2.24
SRM-205ENST00000487300 PPEF1O14829 653 aaPredicted RBP29.03■■■□□ 2.24
SRM-205ENST00000487300 IARSP41252 1262 aaKnown RBP29.03■■■□□ 2.24
SRM-205ENST00000487300 SLC51AQ86UW1 340 aa29.03■■■□□ 2.24
SRM-205ENST00000487300 WWC1Q8IX03 1113 aa29.03■■■□□ 2.24
SRM-205ENST00000487300 SYNE4Q8N205 404 aa29.03■■■□□ 2.24
SRM-205ENST00000487300 SMC1BQ8NDV3 1235 aa29.03■■■□□ 2.24
SRM-205ENST00000487300 ABCC4O15439 1325 aa29.02■■■□□ 2.24
SRM-205ENST00000487300 DDNO94850 711 aaPredicted RBP29.02■■■□□ 2.24
SRM-205ENST00000487300 TRIM28Q13263 835 aaKnown RBP29.02■■■□□ 2.24
SRM-205ENST00000487300 L3MBTL3Q96JM7 780 aaPredicted RBP29.02■■■□□ 2.24
SRM-205ENST00000487300 TRMT112Q9UI30 125 aaKnown RBP29.02■■■□□ 2.24
SRM-205ENST00000487300 LTBP1Q14766 1721 aa29.01■■■□□ 2.23
SRM-205ENST00000487300 COL4A1P02462 1669 aa29.01■■■□□ 2.23
SRM-205ENST00000487300 DUOX1Q9NRD9 1551 aa29.01■■■□□ 2.23
SRM-205ENST00000487300 ZNF541Q9H0D2 1346 aa29■■■□□ 2.23
SRM-205ENST00000487300 FZD9O00144 591 aa29■■■□□ 2.23
SRM-205ENST00000487300 HCLS1P14317 486 aaPredicted RBP29■■■□□ 2.23
SRM-205ENST00000487300 IL16Q14005 1332 aa28.99■■■□□ 2.23
SRM-205ENST00000487300 ELL2O00472 640 aaPredicted RBP28.99■■■□□ 2.23
SRM-205ENST00000487300 PHAXQ9H814 394 aaKnown RBP28.99■■■□□ 2.23
SRM-205ENST00000487300 ATP6V0A2Q9Y487 856 aa28.99■■■□□ 2.23
SRM-205ENST00000487300 DNAJC5GQ8N7S2 189 aa28.98■■■□□ 2.23
SRM-205ENST00000487300 TSPYL6Q8N831 410 aa28.98■■■□□ 2.23
SRM-205ENST00000487300 MYH3P11055 1940 aa28.97■■■□□ 2.23
SRM-205ENST00000487300 TSR2Q969E8 191 aaKnown RBP28.97■■■□□ 2.23
SRM-205ENST00000487300 ATP5J2-PTCD1G3V325 749 aa28.96■■■□□ 2.23
SRM-205ENST00000487300 CHMP4AQ9BY43 222 aa28.96■■■□□ 2.23
SRM-205ENST00000487300 PCNTO95613 3336 aa28.96■■■□□ 2.23
SRM-205ENST00000487300 GOLGA2Q08379 1002 aa28.95■■■□□ 2.22
SRM-205ENST00000487300 CCDC30Q5VVM6 783 aa28.95■■■□□ 2.22
SRM-205ENST00000487300 BBOX1O75936 387 aa28.94■■■□□ 2.22
SRM-205ENST00000487300 IQCA1LA6NCM1 817 aa28.93■■■□□ 2.22
SRM-205ENST00000487300 GRAPQ13588 217 aa28.93■■■□□ 2.22
SRM-205ENST00000487300 GRAPLQ8TC17 118 aaPredicted RBP28.93■■■□□ 2.22
SRM-205ENST00000487300 FAM89AQ96GI7 184 aa28.93■■■□□ 2.22
SRM-205ENST00000487300 RTFDC1Q9BY42 306 aaPredicted RBP28.93■■■□□ 2.22
SRM-205ENST00000487300 SF3B3Q15393 1217 aaKnown RBP28.92■■■□□ 2.22
SRM-205ENST00000487300 RIC3Q7Z5B4 369 aa28.92■■■□□ 2.22
SRM-205ENST00000487300 DDX46Q7L014 1031 aaKnown RBP28.91■■■□□ 2.22
SRM-205ENST00000487300 SP8Q8IXZ3 490 aa28.91■■■□□ 2.22
SRM-205ENST00000487300 GPC2Q8N158 579 aa28.91■■■□□ 2.22
SRM-205ENST00000487300 VPS33BQ9H267 617 aa28.91■■■□□ 2.22
SRM-205ENST00000487300 TCERG1O14776 1098 aaKnown RBP28.9■■■□□ 2.22
SRM-205ENST00000487300 JDP2Q8WYK2 163 aa28.9■■■□□ 2.22
SRM-205ENST00000487300 ZNF428Q96B54 188 aa28.9■■■□□ 2.22
SRM-205ENST00000487300 TAF1DQ9H5J8 278 aaPredicted RBP28.9■■■□□ 2.22
SRM-205ENST00000487300 POTEIP0CG38 1075 aa28.89■■■□□ 2.22
SRM-205ENST00000487300 POTEJP0CG39 1038 aa28.89■■■□□ 2.22
SRM-205ENST00000487300 TMC4Q7Z404 712 aa28.89■■■□□ 2.22
SRM-205ENST00000487300 TWISTNBQ3B726 338 aaPredicted RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms