RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PPP1R1BQ9UD71 204 aaPredicted RBP24.58■■□□□ 1.53
PCOLCE-208ENST00000487172 C10orf71Q711Q0 1435 aa24.58■■□□□ 1.53
PCOLCE-208ENST00000487172 KIF13BQ9NQT8 1826 aa24.58■■□□□ 1.53
PCOLCE-208ENST00000487172 FAM177BA6PVY3 158 aa24.57■■□□□ 1.52
PCOLCE-208ENST00000487172 ALDH1L1O75891 902 aa24.57■■□□□ 1.52
PCOLCE-208ENST00000487172 TRIM27P14373 513 aa24.57■■□□□ 1.52
PCOLCE-208ENST00000487172 ST5P78524 1137 aa24.57■■□□□ 1.52
PCOLCE-208ENST00000487172 CWF19L2Q2TBE0 894 aaKnown RBP24.57■■□□□ 1.52
PCOLCE-208ENST00000487172 SLC4A10Q6U841 1118 aa24.57■■□□□ 1.52
PCOLCE-208ENST00000487172 SRCIN1Q9C0H9 1055 aa24.57■■□□□ 1.52
PCOLCE-208ENST00000487172 TRMT112Q9UI30 125 aaKnown RBP24.57■■□□□ 1.52
PCOLCE-208ENST00000487172 GTF2E1P29083 439 aaPredicted RBP24.56■■□□□ 1.52
PCOLCE-208ENST00000487172 SLC10A5Q5PT55 438 aa24.56■■□□□ 1.52
PCOLCE-208ENST00000487172 ZBTB38Q8NAP3 1195 aaPredicted RBP24.56■■□□□ 1.52
PCOLCE-208ENST00000487172 NPHP1O15259 732 aa24.55■■□□□ 1.52
PCOLCE-208ENST00000487172 GCKRQ14397 625 aa24.55■■□□□ 1.52
PCOLCE-208ENST00000487172 BRIP1Q9BX63 1249 aa24.55■■□□□ 1.52
PCOLCE-208ENST00000487172 ABCC4O15439 1325 aa24.55■■□□□ 1.52
PCOLCE-208ENST00000487172 SH3TC1Q8TE82 1336 aa24.55■■□□□ 1.52
PCOLCE-208ENST00000487172 RIC1Q4ADV7 1423 aa24.54■■□□□ 1.52
PCOLCE-208ENST00000487172 PCCAP05165 728 aaPredicted RBP24.54■■□□□ 1.52
PCOLCE-208ENST00000487172 CCT4P50991 539 aaKnown RBP24.54■■□□□ 1.52
PCOLCE-208ENST00000487172 ERFEQ4G0M1 354 aa24.54■■□□□ 1.52
PCOLCE-208ENST00000487172 NUTM1Q86Y26 1132 aa24.54■■□□□ 1.52
PCOLCE-208ENST00000487172 N4BP2Q86UW6 1770 aaPredicted RBP24.53■■□□□ 1.52
PCOLCE-208ENST00000487172 TGFB2P61812 414 aa24.53■■□□□ 1.52
PCOLCE-208ENST00000487172 FHDC1Q9C0D6 1143 aaPredicted RBP24.53■■□□□ 1.52
PCOLCE-208ENST00000487172 PDZRN3Q9UPQ7 1066 aa24.53■■□□□ 1.52
PCOLCE-208ENST00000487172 H7C1W4 665 aa24.52■■□□□ 1.52
PCOLCE-208ENST00000487172 INTS3Q68E01 1043 aaKnown RBP24.52■■□□□ 1.52
PCOLCE-208ENST00000487172 ANKRD31Q8N7Z5 1873 aa24.51■■□□□ 1.51
PCOLCE-208ENST00000487172 KLRG2A4D1S0 409 aaPredicted RBP24.51■■□□□ 1.51
PCOLCE-208ENST00000487172 MS4A1P11836 297 aa24.51■■□□□ 1.51
PCOLCE-208ENST00000487172 PDE6BP35913 854 aa24.51■■□□□ 1.51
PCOLCE-208ENST00000487172 CCDC24Q8N4L8 307 aa24.51■■□□□ 1.51
PCOLCE-208ENST00000487172 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.51■■□□□ 1.51
PCOLCE-208ENST00000487172 FAM89AQ96GI7 184 aa24.51■■□□□ 1.51
PCOLCE-208ENST00000487172 SYT17Q9BSW7 474 aa24.51■■□□□ 1.51
PCOLCE-208ENST00000487172 CDHR2Q9BYE9 1310 aa24.51■■□□□ 1.51
PCOLCE-208ENST00000487172 HSP90B1P14625 803 aaKnown RBP24.5■■□□□ 1.51
PCOLCE-208ENST00000487172 TNNQ9UQP3 1299 aa24.5■■□□□ 1.51
PCOLCE-208ENST00000487172 ABCC12Q96J65 1359 aa24.5■■□□□ 1.51
PCOLCE-208ENST00000487172 DZIP1LQ8IYY4 767 aaKnown RBP24.49■■□□□ 1.51
PCOLCE-208ENST00000487172 SYNE4Q8N205 404 aa24.49■■□□□ 1.51
PCOLCE-208ENST00000487172 GRM8O00222 908 aa24.48■■□□□ 1.51
PCOLCE-208ENST00000487172 UTYO14607 1347 aa24.48■■□□□ 1.51
PCOLCE-208ENST00000487172 CASP7P55210 303 aa24.48■■□□□ 1.51
PCOLCE-208ENST00000487172 KLHL34Q8N239 644 aa24.48■■□□□ 1.51
PCOLCE-208ENST00000487172 CLUAP1Q96AJ1 413 aa24.48■■□□□ 1.51
PCOLCE-208ENST00000487172 NLRP3Q96P20 1036 aa24.48■■□□□ 1.51
PCOLCE-208ENST00000487172 KIAA1551Q9HCM1 1747 aa24.47■■□□□ 1.51
PCOLCE-208ENST00000487172 IRS4O14654 1257 aaPredicted RBP24.47■■□□□ 1.51
PCOLCE-208ENST00000487172 C9orf78Q9NZ63 289 aaPredicted RBP24.47■■□□□ 1.51
PCOLCE-208ENST00000487172 DDX60Q8IY21 1712 aaKnown RBP24.47■■□□□ 1.51
PCOLCE-208ENST00000487172 HCLS1P14317 486 aaPredicted RBP24.46■■□□□ 1.51
PCOLCE-208ENST00000487172 RTL5Q5HYW3 569 aaPredicted RBP24.46■■□□□ 1.51
PCOLCE-208ENST00000487172 FTSJ3Q8IY81 847 aaKnown RBP24.46■■□□□ 1.51
PCOLCE-208ENST00000487172 LAMB2P55268 1798 aa24.46■■□□□ 1.51
PCOLCE-208ENST00000487172 H0YIN7 160 aa24.45■■□□□ 1.5
PCOLCE-208ENST00000487172 CRY2Q49AN0 593 aa24.45■■□□□ 1.5
PCOLCE-208ENST00000487172 UBE3BQ7Z3V4 1068 aa24.45■■□□□ 1.5
PCOLCE-208ENST00000487172 TMEM57Q8N5G2 664 aa24.45■■□□□ 1.5
PCOLCE-208ENST00000487172 JARID2Q92833 1246 aaPredicted RBP24.45■■□□□ 1.5
PCOLCE-208ENST00000487172 PLA2G12BQ9BX93 195 aa24.45■■□□□ 1.5
PCOLCE-208ENST00000487172 USP44Q9H0E7 712 aa24.45■■□□□ 1.5
PCOLCE-208ENST00000487172 PLIN1O60240 522 aa24.44■■□□□ 1.5
PCOLCE-208ENST00000487172 PDE8AO60658 829 aa24.44■■□□□ 1.5
PCOLCE-208ENST00000487172 PDE3AQ14432 1141 aa24.44■■□□□ 1.5
PCOLCE-208ENST00000487172 C2CD5Q86YS7 1000 aa24.44■■□□□ 1.5
PCOLCE-208ENST00000487172 NLGN2Q8NFZ4 835 aa24.44■■□□□ 1.5
PCOLCE-208ENST00000487172 TNRC6CQ9HCJ0 1690 aaKnown RBP24.43■■□□□ 1.5
PCOLCE-208ENST00000487172 SRGNP10124 158 aa24.43■■□□□ 1.5
PCOLCE-208ENST00000487172 RLBP1P12271 317 aa24.43■■□□□ 1.5
PCOLCE-208ENST00000487172 DPEP1P16444 411 aa24.43■■□□□ 1.5
PCOLCE-208ENST00000487172 KCNA3P22001 575 aa24.43■■□□□ 1.5
PCOLCE-208ENST00000487172 SF3B3Q15393 1217 aaKnown RBP24.43■■□□□ 1.5
PCOLCE-208ENST00000487172 A0A0G2JLW4 131 aa24.42■■□□□ 1.5
PCOLCE-208ENST00000487172 NBPF7P0C2Y1 421 aaPredicted RBP24.42■■□□□ 1.5
PCOLCE-208ENST00000487172 CHRNA5P30532 468 aa24.42■■□□□ 1.5
PCOLCE-208ENST00000487172 RRP1P56182 461 aaKnown RBP24.42■■□□□ 1.5
PCOLCE-208ENST00000487172 NPR1P16066 1061 aa24.41■■□□□ 1.5
PCOLCE-208ENST00000487172 C3orf67Q6ZVT6 689 aa24.41■■□□□ 1.5
PCOLCE-208ENST00000487172 PANK1Q8TE04 598 aa24.41■■□□□ 1.5
PCOLCE-208ENST00000487172 MASTLQ96GX5 879 aa24.41■■□□□ 1.5
PCOLCE-208ENST00000487172 DLEC1Q9Y238 1755 aa24.41■■□□□ 1.5
PCOLCE-208ENST00000487172 HOXA10P31260 410 aaPredicted RBP24.4■■□□□ 1.5
PCOLCE-208ENST00000487172 STYK1Q6J9G0 422 aa24.4■■□□□ 1.5
PCOLCE-208ENST00000487172 COL11A2P13942 1736 aaPredicted RBP24.39■■□□□ 1.5
PCOLCE-208ENST00000487172 MYH3P11055 1940 aa24.38■■□□□ 1.49
PCOLCE-208ENST00000487172 GNAI3P08754 354 aa24.38■■□□□ 1.49
PCOLCE-208ENST00000487172 PIM2Q9P1W9 311 aa24.38■■□□□ 1.49
PCOLCE-208ENST00000487172 HDAC5Q9UQL6 1122 aa24.38■■□□□ 1.49
PCOLCE-208ENST00000487172 BRCA1P38398 1863 aaKnown RBP24.38■■□□□ 1.49
PCOLCE-208ENST00000487172 CSF1RP07333 972 aa24.37■■□□□ 1.49
PCOLCE-208ENST00000487172 ALDH1B1P30837 517 aa24.37■■□□□ 1.49
PCOLCE-208ENST00000487172 CTSWP56202 376 aa24.37■■□□□ 1.49
PCOLCE-208ENST00000487172 FOXO4P98177 505 aa24.37■■□□□ 1.49
PCOLCE-208ENST00000487172 TTLL11Q8NHH1 800 aa24.37■■□□□ 1.49
PCOLCE-208ENST00000487172 RPGRQ92834 1020 aaKnown RBP24.37■■□□□ 1.49
PCOLCE-208ENST00000487172 CNKSR1Q969H4 720 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms