RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 RDH13Q8NBN7 331 aa7.71□□□□□ -1.18
KPNA1-208ENST00000485027 PPCSQ9HAB8 311 aa7.71□□□□□ -1.18
KPNA1-208ENST00000485027 PTPRHQ9HD43 1115 aa7.71□□□□□ -1.18
KPNA1-208ENST00000485027 GGT7Q9UJ14 662 aa7.71□□□□□ -1.18
KPNA1-208ENST00000485027 IQGAP2Q13576 1575 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 C3orf80F5H4A9 247 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 PITPNM1O00562 1244 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 TBX3O15119 743 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 FAM13AO94988 1023 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 SCGB1D2O95969 90 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 MYL1P05976 194 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 RAPGEF1Q13905 1077 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 SIM2Q14190 667 aaPredicted RBP7.7□□□□□ -1.18
KPNA1-208ENST00000485027 PPP2R5AQ15172 486 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 HS2ST1Q7LGA3 356 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 PAF1Q8N7H5 531 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 TMEM121BQ9BXQ6 578 aaPredicted RBP7.7□□□□□ -1.18
KPNA1-208ENST00000485027 CFHR5Q9BXR6 569 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 ATP8A1Q9Y2Q0 1164 aa7.7□□□□□ -1.18
KPNA1-208ENST00000485027 KIAA0586Q9BVV6 1533 aa7.69□□□□□ -1.18
KPNA1-208ENST00000485027 COL6A1P12109 1028 aa7.69□□□□□ -1.18
KPNA1-208ENST00000485027 ATP2B2Q01814 1243 aa7.69□□□□□ -1.18
KPNA1-208ENST00000485027 INO80DQ53TQ3 878 aaPredicted RBP7.69□□□□□ -1.18
KPNA1-208ENST00000485027 DALRD3Q5D0E6 543 aaKnown RBP7.69□□□□□ -1.18
KPNA1-208ENST00000485027 CERKQ8TCT0 537 aa7.69□□□□□ -1.18
KPNA1-208ENST00000485027 HNRNPLLQ8WVV9 542 aaKnown RBP7.69□□□□□ -1.18
KPNA1-208ENST00000485027 AS3MTQ9HBK9 375 aa7.69□□□□□ -1.18
KPNA1-208ENST00000485027 CARMIL1Q5VZK9 1371 aa7.69□□□□□ -1.18
KPNA1-208ENST00000485027 PNMA6FA0A0J9YX94 578 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 SHTN1A0MZ66 631 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 C6orf229H3BNL8 230 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 TIMM44O43615 452 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 FZD6O60353 706 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 SSBP05455 408 aaKnown RBP eCLIP7.68□□□□□ -1.18
KPNA1-208ENST00000485027 HSP90AA1P07900 732 aaKnown RBP7.68□□□□□ -1.18
KPNA1-208ENST00000485027 WEE1P30291 646 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 SLC4A3P48751 1232 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 ATP1A2P50993 1020 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 SQSTM1Q13501 440 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 RAB33AQ14088 237 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 C6orf132Q5T0Z8 1188 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 DNAJC7Q99615 494 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 TRIM55Q9BYV6 548 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 TMX1Q9H3N1 280 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 CHIC2Q9UKJ5 165 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 SETD1BQ9UPS6 1966 aaKnown RBP7.68□□□□□ -1.18
KPNA1-208ENST00000485027 NPHP1O15259 732 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 CALRP27797 417 aaKnown RBP7.68□□□□□ -1.18
KPNA1-208ENST00000485027 KCTD2Q14681 263 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 CCDC102BQ68D86 513 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 RUNDC1Q96C34 613 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 DMRTB1Q96MA1 342 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 FAM129BQ96TA1 746 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 HINFPQ9BQA5 517 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 ANAPC4Q9UJX5 808 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 PDZRN3Q9UPQ7 1066 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 CTDP1Q9Y5B0 961 aaPredicted RBP7.68□□□□□ -1.18
KPNA1-208ENST00000485027 V9GY48 417 aaPredicted RBP7.68□□□□□ -1.18
KPNA1-208ENST00000485027 RAPGEF2Q9Y4G8 1499 aa7.68□□□□□ -1.18
KPNA1-208ENST00000485027 ATF3P18847 181 aa7.67□□□□□ -1.18
KPNA1-208ENST00000485027 POLD1P28340 1107 aa7.67□□□□□ -1.18
KPNA1-208ENST00000485027 USP46P62068 366 aa7.67□□□□□ -1.18
KPNA1-208ENST00000485027 TMEM95Q3KNT9 176 aa7.67□□□□□ -1.18
KPNA1-208ENST00000485027 TRIM50Q86XT4 487 aa7.67□□□□□ -1.18
KPNA1-208ENST00000485027 HOMER1Q86YM7 354 aa7.67□□□□□ -1.18
KPNA1-208ENST00000485027 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.67□□□□□ -1.18
KPNA1-208ENST00000485027 PTCD2Q8WV60 388 aaKnown RBP7.67□□□□□ -1.18
KPNA1-208ENST00000485027 CDCA7LQ96GN5 454 aa7.67□□□□□ -1.18
KPNA1-208ENST00000485027 MRPS23Q9Y3D9 190 aaKnown RBP7.67□□□□□ -1.18
KPNA1-208ENST00000485027 PRXQ9BXM0 1461 aa7.67□□□□□ -1.18
KPNA1-208ENST00000485027 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.66□□□□□ -1.18
KPNA1-208ENST00000485027 PPARGC1BQ86YN6 1023 aaKnown RBP7.66□□□□□ -1.18
KPNA1-208ENST00000485027 TTC30BQ8N4P2 665 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 NGDNQ8NEJ9 315 aaKnown RBP7.66□□□□□ -1.18
KPNA1-208ENST00000485027 FEZ1Q99689 392 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 TMEM260Q9NX78 707 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 LEMD3Q9Y2U8 911 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 AK5Q9Y6K8 562 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 PRG4Q92954 1404 aaPredicted RBP7.66□□□□□ -1.18
KPNA1-208ENST00000485027 DYTNA2CJ06 578 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 PTCD1O75127 700 aaKnown RBP7.66□□□□□ -1.18
KPNA1-208ENST00000485027 GCGRP47871 477 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 EPHB1P54762 984 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 CYB5RLQ6IPT4 315 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 KANK3Q6NY19 840 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 CCDC174Q6PII3 467 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 KSR2Q6VAB6 950 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 PDCD7Q8N8D1 485 aaKnown RBP7.66□□□□□ -1.18
KPNA1-208ENST00000485027 NKX2-3Q8TAU0 364 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 RASGRP4Q8TDF6 673 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 EMID1Q96A84 441 aaPredicted RBP7.66□□□□□ -1.18
KPNA1-208ENST00000485027 NIF3L1Q9GZT8 377 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 COPRSQ9NQ92 184 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 TAGLN3Q9UI15 199 aa7.66□□□□□ -1.18
KPNA1-208ENST00000485027 ADCY10Q96PN6 1610 aa7.65□□□□□ -1.18
KPNA1-208ENST00000485027 CLSPNQ9HAW4 1339 aa7.65□□□□□ -1.18
KPNA1-208ENST00000485027 KCNQ2O43526 872 aa7.65□□□□□ -1.18
KPNA1-208ENST00000485027 GTF2IP78347 998 aa7.65□□□□□ -1.18
KPNA1-208ENST00000485027 MCL1Q07820 350 aa7.65□□□□□ -1.18
KPNA1-208ENST00000485027 NFX1Q12986 1120 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms