RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PPP1R42Q7Z4L9 355 aa15.88■□□□□ 0.13
MSH5-216ENST00000484309 HYPKQ9NX55 129 aa15.88■□□□□ 0.13
MSH5-216ENST00000484309 KLRG2A4D1S0 409 aaPredicted RBP15.87■□□□□ 0.13
MSH5-216ENST00000484309 TCIRG1Q13488 830 aa15.87■□□□□ 0.13
MSH5-216ENST00000484309 HSP90AB3PQ58FF7 597 aa15.87■□□□□ 0.13
MSH5-216ENST00000484309 OLFM4Q6UX06 510 aa15.87■□□□□ 0.13
MSH5-216ENST00000484309 ANKRD13DQ6ZTN6 518 aa15.87■□□□□ 0.13
MSH5-216ENST00000484309 C3orf67Q6ZVT6 689 aa15.87■□□□□ 0.13
MSH5-216ENST00000484309 NLRP10Q86W26 655 aa15.87■□□□□ 0.13
MSH5-216ENST00000484309 PLBD2Q8NHP8 589 aa15.87■□□□□ 0.13
MSH5-216ENST00000484309 UTP14AQ9BVJ6 771 aaKnown RBP15.87■□□□□ 0.13
MSH5-216ENST00000484309 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
MSH5-216ENST00000484309 RIC1Q4ADV7 1423 aa15.86■□□□□ 0.13
MSH5-216ENST00000484309 ATP5J2-PTCD1G3V325 749 aa15.86■□□□□ 0.13
MSH5-216ENST00000484309 SYNE4Q8N205 404 aa15.86■□□□□ 0.13
MSH5-216ENST00000484309 IL16Q14005 1332 aa15.86■□□□□ 0.13
MSH5-216ENST00000484309 TWISTNBQ3B726 338 aaPredicted RBP15.85■□□□□ 0.13
MSH5-216ENST00000484309 CCDC30Q5VVM6 783 aa15.85■□□□□ 0.13
MSH5-216ENST00000484309 RPGRQ92834 1020 aaKnown RBP15.85■□□□□ 0.13
MSH5-216ENST00000484309 TRMT112Q9UI30 125 aaKnown RBP15.85■□□□□ 0.13
MSH5-216ENST00000484309 HCLS1P14317 486 aaPredicted RBP15.84■□□□□ 0.13
MSH5-216ENST00000484309 LMNB1P20700 586 aa15.84■□□□□ 0.13
MSH5-216ENST00000484309 GOLGA2Q08379 1002 aa15.84■□□□□ 0.13
MSH5-216ENST00000484309 CRY2Q49AN0 593 aa15.84■□□□□ 0.13
MSH5-216ENST00000484309 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
MSH5-216ENST00000484309 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
MSH5-216ENST00000484309 SLC51AQ86UW1 340 aa15.84■□□□□ 0.13
MSH5-216ENST00000484309 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
MSH5-216ENST00000484309 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.12
MSH5-216ENST00000484309 WDR63Q8IWG1 891 aa15.83■□□□□ 0.12
MSH5-216ENST00000484309 TAOK3Q9H2K8 898 aa15.83■□□□□ 0.12
MSH5-216ENST00000484309 NMRK2Q9NPI5 230 aa15.83■□□□□ 0.12
MSH5-216ENST00000484309 ALDH1B1P30837 517 aa15.82■□□□□ 0.12
MSH5-216ENST00000484309 C1QTNF8P60827 252 aa15.82■□□□□ 0.12
MSH5-216ENST00000484309 CCDC93Q567U6 631 aa15.82■□□□□ 0.12
MSH5-216ENST00000484309 C7orf43Q8WVR3 580 aa15.82■□□□□ 0.12
MSH5-216ENST00000484309 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
MSH5-216ENST00000484309 MYD88Q99836 296 aa15.82■□□□□ 0.12
MSH5-216ENST00000484309 ISCA1Q9BUE6 129 aa15.82■□□□□ 0.12
MSH5-216ENST00000484309 SH3TC1Q8TE82 1336 aa15.82■□□□□ 0.12
MSH5-216ENST00000484309 MYH3P11055 1940 aa15.82■□□□□ 0.12
MSH5-216ENST00000484309 EXOSC9Q06265 439 aaKnown RBP15.81■□□□□ 0.12
MSH5-216ENST00000484309 SOGA3Q5TF21 947 aa15.81■□□□□ 0.12
MSH5-216ENST00000484309 G2E3Q7L622 706 aa15.81■□□□□ 0.12
MSH5-216ENST00000484309 RBM17Q96I25 401 aaKnown RBP15.81■□□□□ 0.12
MSH5-216ENST00000484309 STK31Q9BXU1 1019 aa15.81■□□□□ 0.12
MSH5-216ENST00000484309 RNF123Q5XPI4 1314 aa15.8■□□□□ 0.12
MSH5-216ENST00000484309 LTBP3Q9NS15 1303 aa15.8■□□□□ 0.12
MSH5-216ENST00000484309 KIF3CO14782 793 aa15.8■□□□□ 0.12
MSH5-216ENST00000484309 HOXA10P31260 410 aaPredicted RBP15.8■□□□□ 0.12
MSH5-216ENST00000484309 SLC10A5Q5PT55 438 aa15.8■□□□□ 0.12
MSH5-216ENST00000484309 FAM89AQ96GI7 184 aa15.8■□□□□ 0.12
MSH5-216ENST00000484309 SPEF2Q9C093 1822 aa15.8■□□□□ 0.12
MSH5-216ENST00000484309 COL4A1P02462 1669 aa15.79■□□□□ 0.12
MSH5-216ENST00000484309 ABCC4O15439 1325 aa15.79■□□□□ 0.12
MSH5-216ENST00000484309 MAP3K2Q9Y2U5 619 aa15.79■□□□□ 0.12
MSH5-216ENST00000484309 KDM2BQ8NHM5 1336 aa15.78■□□□□ 0.12
MSH5-216ENST00000484309 PPEF1O14829 653 aaPredicted RBP15.78■□□□□ 0.12
MSH5-216ENST00000484309 DDX58O95786 925 aaKnown RBP15.78■□□□□ 0.12
MSH5-216ENST00000484309 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
MSH5-216ENST00000484309 JARID2Q92833 1246 aaPredicted RBP15.78■□□□□ 0.12
MSH5-216ENST00000484309 CRAMP1Q96RY5 1269 aa15.78■□□□□ 0.12
MSH5-216ENST00000484309 CHMP4AQ9BY43 222 aa15.78■□□□□ 0.12
MSH5-216ENST00000484309 ZNF277Q9NRM2 450 aaPredicted RBP15.78■□□□□ 0.12
MSH5-216ENST00000484309 SNED1Q8TER0 1413 aa15.77■□□□□ 0.12
MSH5-216ENST00000484309 ZC3H4Q9UPT8 1303 aaKnown RBP15.77■□□□□ 0.12
MSH5-216ENST00000484309 PI4KAP2A4QPH2 592 aa15.77■□□□□ 0.12
MSH5-216ENST00000484309 VAMP4O75379 141 aa15.77■□□□□ 0.12
MSH5-216ENST00000484309 FKBP4Q02790 459 aaKnown RBP eCLIP15.77■□□□□ 0.12
MSH5-216ENST00000484309 PI4KAP1Q8N8J0 262 aa15.77■□□□□ 0.12
MSH5-216ENST00000484309 METTL22Q9BUU2 404 aaPredicted RBP15.77■□□□□ 0.12
MSH5-216ENST00000484309 MYH16Q9H6N6 1097 aa15.77■□□□□ 0.12
MSH5-216ENST00000484309 RRAGCQ9HB90 399 aa15.77■□□□□ 0.12
MSH5-216ENST00000484309 LRRC37AA6NMS7 1700 aa15.77■□□□□ 0.11
MSH5-216ENST00000484309 WDR90Q96KV7 1748 aa15.77■□□□□ 0.11
MSH5-216ENST00000484309 ZNF521Q96K83 1311 aa15.76■□□□□ 0.11
MSH5-216ENST00000484309 KSR2Q6VAB6 950 aa15.76■□□□□ 0.11
MSH5-216ENST00000484309 RTKN2Q8IZC4 609 aa15.76■□□□□ 0.11
MSH5-216ENST00000484309 COL4A5P29400 1685 aa15.76■□□□□ 0.11
MSH5-216ENST00000484309 CCER2I3L3R5 266 aa15.75■□□□□ 0.11
MSH5-216ENST00000484309 IRS4O14654 1257 aaPredicted RBP15.75■□□□□ 0.11
MSH5-216ENST00000484309 TRIM28Q13263 835 aaKnown RBP15.75■□□□□ 0.11
MSH5-216ENST00000484309 DDX46Q7L014 1031 aaKnown RBP15.75■□□□□ 0.11
MSH5-216ENST00000484309 GLTPD2A6NH11 291 aa15.74■□□□□ 0.11
MSH5-216ENST00000484309 FLIIQ13045 1269 aa15.74■□□□□ 0.11
MSH5-216ENST00000484309 CWC25Q9NXE8 425 aaPredicted RBP15.74■□□□□ 0.11
MSH5-216ENST00000484309 IGKV5-2P06315 115 aa15.73■□□□□ 0.11
MSH5-216ENST00000484309 IARSP41252 1262 aaKnown RBP15.73■□□□□ 0.11
MSH5-216ENST00000484309 FKBP5Q13451 457 aaPredicted RBP15.73■□□□□ 0.11
MSH5-216ENST00000484309 CWF19L2Q2TBE0 894 aaKnown RBP15.73■□□□□ 0.11
MSH5-216ENST00000484309 ZBTB38Q8NAP3 1195 aaPredicted RBP15.73■□□□□ 0.11
MSH5-216ENST00000484309 CCDC191Q8NCU4 936 aa15.73■□□□□ 0.11
MSH5-216ENST00000484309 NEXNQ0ZGT2 675 aa15.72■□□□□ 0.11
MSH5-216ENST00000484309 GRAPQ13588 217 aa15.72■□□□□ 0.11
MSH5-216ENST00000484309 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
MSH5-216ENST00000484309 CC2D2BQ6DHV5 1058 aa15.72■□□□□ 0.11
MSH5-216ENST00000484309 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
MSH5-216ENST00000484309 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
MSH5-216ENST00000484309 CCDC85AQ96PX6 553 aaPredicted RBP15.72■□□□□ 0.11
MSH5-216ENST00000484309 PSMD1Q99460 953 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms