RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 CRY2Q49AN0 593 aa30.41■■■□□ 2.46
RHBDF1-208ENST00000482904 FAM9BQ8IZU0 186 aa30.41■■■□□ 2.46
RHBDF1-208ENST00000482904 PLBD2Q8NHP8 589 aa30.41■■■□□ 2.46
RHBDF1-208ENST00000482904 TIAM2Q8IVF5 1701 aa30.41■■■□□ 2.46
RHBDF1-208ENST00000482904 RNF123Q5XPI4 1314 aa30.41■■■□□ 2.46
RHBDF1-208ENST00000482904 TCIRG1Q13488 830 aa30.4■■■□□ 2.46
RHBDF1-208ENST00000482904 C8orf58Q8NAV2 365 aa30.4■■■□□ 2.46
RHBDF1-208ENST00000482904 NMRK2Q9NPI5 230 aa30.4■■■□□ 2.46
RHBDF1-208ENST00000482904 KIF3CO14782 793 aa30.39■■■□□ 2.46
RHBDF1-208ENST00000482904 ANKRD13DQ6ZTN6 518 aa30.39■■■□□ 2.46
RHBDF1-208ENST00000482904 NLRP10Q86W26 655 aa30.39■■■□□ 2.46
RHBDF1-208ENST00000482904 CHMP4AQ9BY43 222 aa30.39■■■□□ 2.46
RHBDF1-208ENST00000482904 SALL2Q9Y467 1007 aaPredicted RBP30.39■■■□□ 2.46
RHBDF1-208ENST00000482904 LTBP3Q9NS15 1303 aa30.39■■■□□ 2.46
RHBDF1-208ENST00000482904 GOLGA2Q08379 1002 aa30.38■■■□□ 2.45
RHBDF1-208ENST00000482904 FER1L6Q2WGJ9 1857 aa30.38■■■□□ 2.45
RHBDF1-208ENST00000482904 NCBP3Q53F19 620 aaKnown RBP30.37■■■□□ 2.45
RHBDF1-208ENST00000482904 RBM17Q96I25 401 aaKnown RBP30.37■■■□□ 2.45
RHBDF1-208ENST00000482904 TRMT112Q9UI30 125 aaKnown RBP30.37■■■□□ 2.45
RHBDF1-208ENST00000482904 IL16Q14005 1332 aa30.37■■■□□ 2.45
RHBDF1-208ENST00000482904 CCDC30Q5VVM6 783 aa30.36■■■□□ 2.45
RHBDF1-208ENST00000482904 C7orf43Q8WVR3 580 aa30.36■■■□□ 2.45
RHBDF1-208ENST00000482904 NLRP3Q96P20 1036 aa30.36■■■□□ 2.45
RHBDF1-208ENST00000482904 SH3TC1Q8TE82 1336 aa30.34■■■□□ 2.45
RHBDF1-208ENST00000482904 C3orf67Q6ZVT6 689 aa30.34■■■□□ 2.45
RHBDF1-208ENST00000482904 C16orf71Q8IYS4 520 aaPredicted RBP30.34■■■□□ 2.45
RHBDF1-208ENST00000482904 OLFM4Q6UX06 510 aa30.33■■■□□ 2.45
RHBDF1-208ENST00000482904 RIC3Q7Z5B4 369 aa30.33■■■□□ 2.45
RHBDF1-208ENST00000482904 RTKN2Q8IZC4 609 aa30.33■■■□□ 2.45
RHBDF1-208ENST00000482904 TSPYL6Q8N831 410 aa30.33■■■□□ 2.45
RHBDF1-208ENST00000482904 ZNF428Q96B54 188 aa30.33■■■□□ 2.45
RHBDF1-208ENST00000482904 PHAXQ9H814 394 aaKnown RBP30.33■■■□□ 2.45
RHBDF1-208ENST00000482904 ATP5J2-PTCD1G3V325 749 aa30.32■■■□□ 2.44
RHBDF1-208ENST00000482904 HOXA10P31260 410 aaPredicted RBP30.32■■■□□ 2.44
RHBDF1-208ENST00000482904 FKBP4Q02790 459 aaKnown RBP eCLIP30.31■■■□□ 2.44
RHBDF1-208ENST00000482904 STK31Q9BXU1 1019 aa30.31■■■□□ 2.44
RHBDF1-208ENST00000482904 GLTPD2A6NH11 291 aa30.3■■■□□ 2.44
RHBDF1-208ENST00000482904 PPEF1O14829 653 aaPredicted RBP30.3■■■□□ 2.44
RHBDF1-208ENST00000482904 HCLS1P14317 486 aaPredicted RBP30.3■■■□□ 2.44
RHBDF1-208ENST00000482904 TWISTNBQ3B726 338 aaPredicted RBP30.3■■■□□ 2.44
RHBDF1-208ENST00000482904 SLC10A5Q5PT55 438 aa30.3■■■□□ 2.44
RHBDF1-208ENST00000482904 CRAMP1Q96RY5 1269 aa30.3■■■□□ 2.44
RHBDF1-208ENST00000482904 FANCIQ9NVI1 1328 aa30.29■■■□□ 2.44
RHBDF1-208ENST00000482904 DDX58O95786 925 aaKnown RBP30.29■■■□□ 2.44
RHBDF1-208ENST00000482904 ISCA1Q9BUE6 129 aa30.29■■■□□ 2.44
RHBDF1-208ENST00000482904 RRAGCQ9HB90 399 aa30.29■■■□□ 2.44
RHBDF1-208ENST00000482904 CCDC88AQ3V6T2 1871 aa30.29■■■□□ 2.44
RHBDF1-208ENST00000482904 TOMM70O94826 608 aa30.28■■■□□ 2.44
RHBDF1-208ENST00000482904 DPY19L2Q6NUT2 758 aa30.28■■■□□ 2.44
RHBDF1-208ENST00000482904 WDR63Q8IWG1 891 aa30.28■■■□□ 2.44
RHBDF1-208ENST00000482904 TCERG1O14776 1098 aaKnown RBP30.27■■■□□ 2.44
RHBDF1-208ENST00000482904 CC2D2BQ6DHV5 1058 aa30.27■■■□□ 2.44
RHBDF1-208ENST00000482904 SYNE4Q8N205 404 aa30.27■■■□□ 2.44
RHBDF1-208ENST00000482904 TMX4Q9H1E5 349 aaPredicted RBP30.27■■■□□ 2.44
RHBDF1-208ENST00000482904 ZNF277Q9NRM2 450 aaPredicted RBP30.27■■■□□ 2.44
RHBDF1-208ENST00000482904 MYD88Q99836 296 aa30.25■■■□□ 2.43
RHBDF1-208ENST00000482904 ABCC4O15439 1325 aa30.24■■■□□ 2.43
RHBDF1-208ENST00000482904 FAM89AQ96GI7 184 aa30.24■■■□□ 2.43
RHBDF1-208ENST00000482904 RTL5Q5HYW3 569 aaPredicted RBP30.23■■■□□ 2.43
RHBDF1-208ENST00000482904 DDX46Q7L014 1031 aaKnown RBP30.23■■■□□ 2.43
RHBDF1-208ENST00000482904 DICER1Q9UPY3 1922 aaKnown RBP30.23■■■□□ 2.43
RHBDF1-208ENST00000482904 PSMD1Q99460 953 aa30.22■■■□□ 2.43
RHBDF1-208ENST00000482904 LAMB2P55268 1798 aa30.21■■■□□ 2.43
RHBDF1-208ENST00000482904 IARSP41252 1262 aaKnown RBP30.21■■■□□ 2.43
RHBDF1-208ENST00000482904 TRIM28Q13263 835 aaKnown RBP30.21■■■□□ 2.43
RHBDF1-208ENST00000482904 GRIPAP1Q4V328 841 aa30.21■■■□□ 2.43
RHBDF1-208ENST00000482904 RBM46Q8TBY0 533 aaKnown RBP30.21■■■□□ 2.43
RHBDF1-208ENST00000482904 SNED1Q8TER0 1413 aa30.21■■■□□ 2.43
RHBDF1-208ENST00000482904 VEGFAP15692 232 aaPredicted RBP30.2■■■□□ 2.43
RHBDF1-208ENST00000482904 HSPA6P17066 643 aa30.2■■■□□ 2.43
RHBDF1-208ENST00000482904 MAP3K2Q9Y2U5 619 aa30.2■■■□□ 2.43
RHBDF1-208ENST00000482904 MYH16Q9H6N6 1097 aa30.19■■■□□ 2.42
RHBDF1-208ENST00000482904 SLC51AQ86UW1 340 aa30.18■■■□□ 2.42
RHBDF1-208ENST00000482904 METTL22Q9BUU2 404 aaPredicted RBP30.18■■■□□ 2.42
RHBDF1-208ENST00000482904 ATP6V0A2Q9Y487 856 aa30.18■■■□□ 2.42
RHBDF1-208ENST00000482904 DDX60Q8IY21 1712 aaKnown RBP30.18■■■□□ 2.42
RHBDF1-208ENST00000482904 IRS4O14654 1257 aaPredicted RBP30.17■■■□□ 2.42
RHBDF1-208ENST00000482904 SLC4A2P04920 1241 aa30.17■■■□□ 2.42
RHBDF1-208ENST00000482904 EXOSC9Q06265 439 aaKnown RBP30.17■■■□□ 2.42
RHBDF1-208ENST00000482904 GRAPQ13588 217 aa30.17■■■□□ 2.42
RHBDF1-208ENST00000482904 ZBTB38Q8NAP3 1195 aaPredicted RBP30.17■■■□□ 2.42
RHBDF1-208ENST00000482904 CCDC191Q8NCU4 936 aa30.17■■■□□ 2.42
RHBDF1-208ENST00000482904 GRAPLQ8TC17 118 aaPredicted RBP30.17■■■□□ 2.42
RHBDF1-208ENST00000482904 CWC25Q9NXE8 425 aaPredicted RBP30.17■■■□□ 2.42
RHBDF1-208ENST00000482904 WDR90Q96KV7 1748 aa30.16■■■□□ 2.42
RHBDF1-208ENST00000482904 BBOX1O75936 387 aa30.16■■■□□ 2.42
RHBDF1-208ENST00000482904 KSR2Q6VAB6 950 aa30.16■■■□□ 2.42
RHBDF1-208ENST00000482904 JDP2Q8WYK2 163 aa30.16■■■□□ 2.42
RHBDF1-208ENST00000482904 PI4KAP2A4QPH2 592 aa30.15■■■□□ 2.42
RHBDF1-208ENST00000482904 DDNO94850 711 aaPredicted RBP30.15■■■□□ 2.42
RHBDF1-208ENST00000482904 HSP90B1P14625 803 aaKnown RBP30.15■■■□□ 2.42
RHBDF1-208ENST00000482904 NEXNQ0ZGT2 675 aa30.15■■■□□ 2.42
RHBDF1-208ENST00000482904 PI4KAP1Q8N8J0 262 aa30.15■■■□□ 2.42
RHBDF1-208ENST00000482904 SPINK5Q9NQ38 1064 aaPredicted RBP30.14■■■□□ 2.42
RHBDF1-208ENST00000482904 ZNF541Q9H0D2 1346 aa30.14■■■□□ 2.42
RHBDF1-208ENST00000482904 FSTL1Q12841 308 aa30.13■■■□□ 2.41
RHBDF1-208ENST00000482904 LARGE2Q8N3Y3 721 aa30.13■■■□□ 2.41
RHBDF1-208ENST00000482904 SMC1BQ8NDV3 1235 aa30.13■■■□□ 2.41
RHBDF1-208ENST00000482904 PCCAP05165 728 aaPredicted RBP30.12■■■□□ 2.41
RHBDF1-208ENST00000482904 FLIIQ13045 1269 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms