RNA–Protein interactions for RNA: ENST00000481368.5

SNHG12-209, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-209ENST00000481368 ZNF428Q96B54 188 aa18.75■□□□□ 0.59
SNHG12-209ENST00000481368 DBF4Q9UBU7 674 aaPredicted RBP18.75■□□□□ 0.59
SNHG12-209ENST00000481368 LAMB2P55268 1798 aa18.75■□□□□ 0.59
SNHG12-209ENST00000481368 CALD1Q05682 793 aaKnown RBP18.74■□□□□ 0.59
SNHG12-209ENST00000481368 SYNE4Q8N205 404 aa18.74■□□□□ 0.59
SNHG12-209ENST00000481368 TCIRG1Q13488 830 aa18.73■□□□□ 0.59
SNHG12-209ENST00000481368 NLRP10Q86W26 655 aa18.73■□□□□ 0.59
SNHG12-209ENST00000481368 SNED1Q8TER0 1413 aa18.73■□□□□ 0.59
SNHG12-209ENST00000481368 PARP10Q53GL7 1025 aa18.72■□□□□ 0.59
SNHG12-209ENST00000481368 PHAXQ9H814 394 aaKnown RBP18.72■□□□□ 0.59
SNHG12-209ENST00000481368 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
SNHG12-209ENST00000481368 LTBP3Q9NS15 1303 aa18.71■□□□□ 0.59
SNHG12-209ENST00000481368 ANKRD13DQ6ZTN6 518 aa18.71■□□□□ 0.59
SNHG12-209ENST00000481368 PPP1R42Q7Z4L9 355 aa18.71■□□□□ 0.59
SNHG12-209ENST00000481368 UTP14AQ9BVJ6 771 aaKnown RBP18.71■□□□□ 0.59
SNHG12-209ENST00000481368 TAOK3Q9H2K8 898 aa18.71■□□□□ 0.59
SNHG12-209ENST00000481368 SALL2Q9Y467 1007 aaPredicted RBP18.71■□□□□ 0.59
SNHG12-209ENST00000481368 TAF1P21675 1872 aa18.71■□□□□ 0.58
SNHG12-209ENST00000481368 DDX60Q8IY21 1712 aaKnown RBP18.7■□□□□ 0.58
SNHG12-209ENST00000481368 HOXA10P31260 410 aaPredicted RBP18.7■□□□□ 0.58
SNHG12-209ENST00000481368 SLC10A5Q5PT55 438 aa18.7■□□□□ 0.58
SNHG12-209ENST00000481368 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
SNHG12-209ENST00000481368 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
SNHG12-209ENST00000481368 HSP90AB3PQ58FF7 597 aa18.69■□□□□ 0.58
SNHG12-209ENST00000481368 FAM9BQ8IZU0 186 aa18.69■□□□□ 0.58
SNHG12-209ENST00000481368 ISCA1Q9BUE6 129 aa18.69■□□□□ 0.58
SNHG12-209ENST00000481368 ZC3H4Q9UPT8 1303 aaKnown RBP18.69■□□□□ 0.58
SNHG12-209ENST00000481368 ATP5J2-PTCD1G3V325 749 aa18.68■□□□□ 0.58
SNHG12-209ENST00000481368 HCLS1P14317 486 aaPredicted RBP18.68■□□□□ 0.58
SNHG12-209ENST00000481368 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
SNHG12-209ENST00000481368 ALDH1B1P30837 517 aa18.68■□□□□ 0.58
SNHG12-209ENST00000481368 CCDC93Q567U6 631 aa18.68■□□□□ 0.58
SNHG12-209ENST00000481368 IL16Q14005 1332 aa18.67■□□□□ 0.58
SNHG12-209ENST00000481368 SOGA3Q5TF21 947 aa18.67■□□□□ 0.58
SNHG12-209ENST00000481368 RRAGCQ9HB90 399 aa18.67■□□□□ 0.58
SNHG12-209ENST00000481368 COL4A1P02462 1669 aa18.66■□□□□ 0.58
SNHG12-209ENST00000481368 GLTPD2A6NH11 291 aa18.66■□□□□ 0.58
SNHG12-209ENST00000481368 TCERG1O14776 1098 aaKnown RBP18.66■□□□□ 0.58
SNHG12-209ENST00000481368 RPGRQ92834 1020 aaKnown RBP18.66■□□□□ 0.58
SNHG12-209ENST00000481368 TRMT112Q9UI30 125 aaKnown RBP18.66■□□□□ 0.58
SNHG12-209ENST00000481368 RNF123Q5XPI4 1314 aa18.66■□□□□ 0.58
SNHG12-209ENST00000481368 KDM2BQ8NHM5 1336 aa18.66■□□□□ 0.58
SNHG12-209ENST00000481368 FANCIQ9NVI1 1328 aa18.66■□□□□ 0.58
SNHG12-209ENST00000481368 COL4A5P29400 1685 aa18.65■□□□□ 0.58
SNHG12-209ENST00000481368 NLRP3Q96P20 1036 aa18.65■□□□□ 0.58
SNHG12-209ENST00000481368 CRAMP1Q96RY5 1269 aa18.65■□□□□ 0.58
SNHG12-209ENST00000481368 ZNF277Q9NRM2 450 aaPredicted RBP18.65■□□□□ 0.58
SNHG12-209ENST00000481368 SH3TC1Q8TE82 1336 aa18.65■□□□□ 0.58
SNHG12-209ENST00000481368 POTECB2RU33 542 aa18.64■□□□□ 0.58
SNHG12-209ENST00000481368 FKBP4Q02790 459 aaKnown RBP eCLIP18.64■□□□□ 0.58
SNHG12-209ENST00000481368 ABCC4O15439 1325 aa18.64■□□□□ 0.57
SNHG12-209ENST00000481368 WDR90Q96KV7 1748 aa18.64■□□□□ 0.57
SNHG12-209ENST00000481368 TOMM70O94826 608 aa18.64■□□□□ 0.57
SNHG12-209ENST00000481368 TWISTNBQ3B726 338 aaPredicted RBP18.64■□□□□ 0.57
SNHG12-209ENST00000481368 CCDC30Q5VVM6 783 aa18.64■□□□□ 0.57
SNHG12-209ENST00000481368 FAM89AQ96GI7 184 aa18.64■□□□□ 0.57
SNHG12-209ENST00000481368 RBM17Q96I25 401 aaKnown RBP18.64■□□□□ 0.57
SNHG12-209ENST00000481368 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
SNHG12-209ENST00000481368 G2E3Q7L622 706 aa18.63■□□□□ 0.57
SNHG12-209ENST00000481368 RIC3Q7Z5B4 369 aa18.63■□□□□ 0.57
SNHG12-209ENST00000481368 WDR63Q8IWG1 891 aa18.63■□□□□ 0.57
SNHG12-209ENST00000481368 PPEF1O14829 653 aaPredicted RBP18.62■□□□□ 0.57
SNHG12-209ENST00000481368 GOLGA2Q08379 1002 aa18.62■□□□□ 0.57
SNHG12-209ENST00000481368 RTL5Q5HYW3 569 aaPredicted RBP18.62■□□□□ 0.57
SNHG12-209ENST00000481368 RTKN2Q8IZC4 609 aa18.62■□□□□ 0.57
SNHG12-209ENST00000481368 MYD88Q99836 296 aa18.61■□□□□ 0.57
SNHG12-209ENST00000481368 DDNO94850 711 aaPredicted RBP18.6■□□□□ 0.57
SNHG12-209ENST00000481368 PSMD1Q99460 953 aa18.6■□□□□ 0.57
SNHG12-209ENST00000481368 ZNF521Q96K83 1311 aa18.6■□□□□ 0.57
SNHG12-209ENST00000481368 VAMP4O75379 141 aa18.59■□□□□ 0.57
SNHG12-209ENST00000481368 CACNA1FO60840 1977 aa18.59■□□□□ 0.57
SNHG12-209ENST00000481368 ZNF541Q9H0D2 1346 aa18.59■□□□□ 0.57
SNHG12-209ENST00000481368 HSPA6P17066 643 aa18.59■□□□□ 0.57
SNHG12-209ENST00000481368 IARSP41252 1262 aaKnown RBP18.59■□□□□ 0.57
SNHG12-209ENST00000481368 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
SNHG12-209ENST00000481368 METTL22Q9BUU2 404 aaPredicted RBP18.59■□□□□ 0.57
SNHG12-209ENST00000481368 MAP3K2Q9Y2U5 619 aa18.59■□□□□ 0.57
SNHG12-209ENST00000481368 ATP6V0A2Q9Y487 856 aa18.59■□□□□ 0.57
SNHG12-209ENST00000481368 PCNTO95613 3336 aa18.58■□□□□ 0.57
SNHG12-209ENST00000481368 PI4KAP2A4QPH2 592 aa18.58■□□□□ 0.56
SNHG12-209ENST00000481368 CC2D2BQ6DHV5 1058 aa18.58■□□□□ 0.56
SNHG12-209ENST00000481368 PI4KAP1Q8N8J0 262 aa18.58■□□□□ 0.56
SNHG12-209ENST00000481368 RBM46Q8TBY0 533 aaKnown RBP18.58■□□□□ 0.56
SNHG12-209ENST00000481368 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.56
SNHG12-209ENST00000481368 LRRC37AA6NMS7 1700 aa18.57■□□□□ 0.56
SNHG12-209ENST00000481368 SLC4A2P04920 1241 aa18.57■□□□□ 0.56
SNHG12-209ENST00000481368 IGKV5-2P06315 115 aa18.57■□□□□ 0.56
SNHG12-209ENST00000481368 SF3B3Q15393 1217 aaKnown RBP18.57■□□□□ 0.56
SNHG12-209ENST00000481368 KSR2Q6VAB6 950 aa18.57■□□□□ 0.56
SNHG12-209ENST00000481368 DUOX1Q9NRD9 1551 aa18.57■□□□□ 0.56
SNHG12-209ENST00000481368 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
SNHG12-209ENST00000481368 VEGFAP15692 232 aaPredicted RBP18.56■□□□□ 0.56
SNHG12-209ENST00000481368 GRAPQ13588 217 aa18.56■□□□□ 0.56
SNHG12-209ENST00000481368 DPY19L2Q6NUT2 758 aa18.56■□□□□ 0.56
SNHG12-209ENST00000481368 ZBTB38Q8NAP3 1195 aaPredicted RBP18.56■□□□□ 0.56
SNHG12-209ENST00000481368 GRAPLQ8TC17 118 aaPredicted RBP18.56■□□□□ 0.56
SNHG12-209ENST00000481368 CELF1Q92879 486 aaKnown RBP18.56■□□□□ 0.56
SNHG12-209ENST00000481368 FZD9O00144 591 aa18.55■□□□□ 0.56
SNHG12-209ENST00000481368 CCDC191Q8NCU4 936 aa18.55■□□□□ 0.56
SNHG12-209ENST00000481368 STK31Q9BXU1 1019 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms