RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
VCP-206ENST00000480327 CCDC93Q567U6 631 aa11.75□□□□□ -0.53
VCP-206ENST00000480327 TSR2Q969E8 191 aaKnown RBP11.75□□□□□ -0.53
VCP-206ENST00000480327 CFAP44Q96MT7 982 aa11.75□□□□□ -0.53
VCP-206ENST00000480327 TAF1DQ9H5J8 278 aaPredicted RBP11.75□□□□□ -0.53
VCP-206ENST00000480327 SPINK5Q9NQ38 1064 aaPredicted RBP11.75□□□□□ -0.53
VCP-206ENST00000480327 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
VCP-206ENST00000480327 MBIPQ9NS73 344 aa11.75□□□□□ -0.53
VCP-206ENST00000480327 IFT57Q9NWB7 429 aa11.75□□□□□ -0.53
VCP-206ENST00000480327 MKRN1Q9UHC7 482 aaKnown RBP11.75□□□□□ -0.53
VCP-206ENST00000480327 NPHP1O15259 732 aa11.74□□□□□ -0.53
VCP-206ENST00000480327 CAPN15O75808 1086 aa11.74□□□□□ -0.53
VCP-206ENST00000480327 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
VCP-206ENST00000480327 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
VCP-206ENST00000480327 EIF4A1P60842 406 aaKnown RBP11.74□□□□□ -0.53
VCP-206ENST00000480327 SOGA3Q5TF21 947 aa11.74□□□□□ -0.53
VCP-206ENST00000480327 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
VCP-206ENST00000480327 TNS4Q8IZW8 715 aa11.74□□□□□ -0.53
VCP-206ENST00000480327 NGEFQ8N5V2 710 aa11.74□□□□□ -0.53
VCP-206ENST00000480327 TRPM7Q96QT4 1865 aa11.74□□□□□ -0.53
VCP-206ENST00000480327 CNTNAP1P78357 1384 aa11.73□□□□□ -0.53
VCP-206ENST00000480327 CRY2Q49AN0 593 aa11.73□□□□□ -0.53
VCP-206ENST00000480327 TPTE2Q6XPS3 522 aa11.73□□□□□ -0.53
VCP-206ENST00000480327 TTLL7Q6ZT98 887 aa11.73□□□□□ -0.53
VCP-206ENST00000480327 UBN2Q6ZU65 1347 aa11.73□□□□□ -0.53
VCP-206ENST00000480327 NPM2Q86SE8 214 aaKnown RBP11.73□□□□□ -0.53
VCP-206ENST00000480327 ZNF521Q96K83 1311 aa11.73□□□□□ -0.53
VCP-206ENST00000480327 YTHDC1Q96MU7 727 aaKnown RBP11.73□□□□□ -0.53
VCP-206ENST00000480327 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
VCP-206ENST00000480327 ZNF652Q9Y2D9 606 aa11.73□□□□□ -0.53
VCP-206ENST00000480327 RIC1Q4ADV7 1423 aa11.72□□□□□ -0.53
VCP-206ENST00000480327 IL16Q14005 1332 aa11.72□□□□□ -0.53
VCP-206ENST00000480327 FZD9O00144 591 aa11.72□□□□□ -0.53
VCP-206ENST00000480327 ELL2O00472 640 aaPredicted RBP11.72□□□□□ -0.53
VCP-206ENST00000480327 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
VCP-206ENST00000480327 LDHDQ86WU2 507 aa11.72□□□□□ -0.53
VCP-206ENST00000480327 NUTM1Q86Y26 1132 aa11.72□□□□□ -0.53
VCP-206ENST00000480327 SYNE4Q8N205 404 aa11.72□□□□□ -0.53
VCP-206ENST00000480327 NECTIN2Q92692 538 aa11.72□□□□□ -0.53
VCP-206ENST00000480327 CDCA7LQ96GN5 454 aa11.72□□□□□ -0.53
VCP-206ENST00000480327 THSD7BQ9C0I4 1608 aa11.71□□□□□ -0.53
VCP-206ENST00000480327 RNF123Q5XPI4 1314 aa11.71□□□□□ -0.53
VCP-206ENST00000480327 FANCIQ9NVI1 1328 aa11.71□□□□□ -0.53
VCP-206ENST00000480327 EIF2S2P20042 333 aaKnown RBP11.71□□□□□ -0.53
VCP-206ENST00000480327 IARSP41252 1262 aaKnown RBP11.71□□□□□ -0.53
VCP-206ENST00000480327 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.53
VCP-206ENST00000480327 LRP10Q7Z4F1 713 aa11.71□□□□□ -0.53
VCP-206ENST00000480327 MAP3K15Q6ZN16 1313 aa11.7□□□□□ -0.54
VCP-206ENST00000480327 IQCA1LA6NCM1 817 aa11.7□□□□□ -0.54
VCP-206ENST00000480327 ERVV-1B6SEH8 477 aa11.7□□□□□ -0.54
VCP-206ENST00000480327 FOXN1O15353 648 aa11.7□□□□□ -0.54
VCP-206ENST00000480327 SUSD4Q5VX71 490 aa11.7□□□□□ -0.54
VCP-206ENST00000480327 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
VCP-206ENST00000480327 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
VCP-206ENST00000480327 MYH16Q9H6N6 1097 aa11.7□□□□□ -0.54
VCP-206ENST00000480327 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
VCP-206ENST00000480327 IBTKQ9P2D0 1353 aaPredicted RBP11.69□□□□□ -0.54
VCP-206ENST00000480327 NTSR2O95665 410 aa11.69□□□□□ -0.54
VCP-206ENST00000480327 GPTP24298 496 aa11.69□□□□□ -0.54
VCP-206ENST00000480327 ALDH1B1P30837 517 aa11.69□□□□□ -0.54
VCP-206ENST00000480327 HOXA10P31260 410 aaPredicted RBP11.69□□□□□ -0.54
VCP-206ENST00000480327 EPHX2P34913 555 aa11.69□□□□□ -0.54
VCP-206ENST00000480327 VEGFBP49765 207 aa11.69□□□□□ -0.54
VCP-206ENST00000480327 EAPPQ56P03 285 aaPredicted RBP11.69□□□□□ -0.54
VCP-206ENST00000480327 DUSP27Q5VZP5 1158 aa11.69□□□□□ -0.54
VCP-206ENST00000480327 ZNF34Q8IZ26 560 aa11.69□□□□□ -0.54
VCP-206ENST00000480327 PSMD1Q99460 953 aa11.69□□□□□ -0.54
VCP-206ENST00000480327 HACL1Q9UJ83 578 aa11.69□□□□□ -0.54
VCP-206ENST00000480327 E9PSI1 815 aa11.68□□□□□ -0.54
VCP-206ENST00000480327 MYL6BP14649 208 aa11.68□□□□□ -0.54
VCP-206ENST00000480327 EXOSC9Q06265 439 aaKnown RBP11.68□□□□□ -0.54
VCP-206ENST00000480327 FMR1Q06787 632 aaKnown RBP eCLIP11.68□□□□□ -0.548e-7■■■■□ 21.4
VCP-206ENST00000480327 SLFN5Q08AF3 891 aa11.68□□□□□ -0.54
VCP-206ENST00000480327 PDIA6Q15084 440 aa11.68□□□□□ -0.54
VCP-206ENST00000480327 MAP1SQ66K74 1059 aaPredicted RBP11.68□□□□□ -0.54
VCP-206ENST00000480327 TSPYL6Q8N831 410 aa11.68□□□□□ -0.54
VCP-206ENST00000480327 ZBTB3Q9H5J0 574 aa11.68□□□□□ -0.54
VCP-206ENST00000480327 COL4A1P02462 1669 aa11.68□□□□□ -0.54
VCP-206ENST00000480327 LRRC37AA6NMS7 1700 aa11.67□□□□□ -0.54
VCP-206ENST00000480327 TMEM88BA6NKF7 163 aa11.67□□□□□ -0.54
VCP-206ENST00000480327 TCERG1O14776 1098 aaKnown RBP11.67□□□□□ -0.54
VCP-206ENST00000480327 PROSER3Q2NL68 480 aa11.67□□□□□ -0.54
VCP-206ENST00000480327 GPC2Q8N158 579 aa11.67□□□□□ -0.54
VCP-206ENST00000480327 NYXQ9GZU5 481 aa11.67□□□□□ -0.54
VCP-206ENST00000480327 DUOX1Q9NRD9 1551 aa11.67□□□□□ -0.54
VCP-206ENST00000480327 ZBED9Q6R2W3 1325 aa11.66□□□□□ -0.54
VCP-206ENST00000480327 ANXA1P04083 346 aa11.66□□□□□ -0.54
VCP-206ENST00000480327 GTF2E1P29083 439 aaPredicted RBP11.66□□□□□ -0.54
VCP-206ENST00000480327 SCNN1DP51172 638 aa11.66□□□□□ -0.54
VCP-206ENST00000480327 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
VCP-206ENST00000480327 HDGFL1Q5TGJ6 251 aa11.66□□□□□ -0.54
VCP-206ENST00000480327 GIGYF2Q6Y7W6 1299 aaKnown RBP11.66□□□□□ -0.54
VCP-206ENST00000480327 CNTROBQ8N137 903 aa11.66□□□□□ -0.54
VCP-206ENST00000480327 POLR2AP24928 1970 aaKnown RBP11.65□□□□□ -0.54
VCP-206ENST00000480327 RASSF10A6NK89 507 aa11.65□□□□□ -0.54
VCP-206ENST00000480327 EPS15P42566 896 aa11.65□□□□□ -0.54
VCP-206ENST00000480327 KIF6Q6ZMV9 814 aa11.65□□□□□ -0.54
VCP-206ENST00000480327 CRAMP1Q96RY5 1269 aa11.65□□□□□ -0.54
VCP-206ENST00000480327 WBP1LQ9NX94 342 aa11.65□□□□□ -0.54
VCP-206ENST00000480327 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms