RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 BHMTQ93088 406 aa6.44□□□□□ -1.38
NF1-209ENST00000479536 CEP63Q96MT8 703 aa6.44□□□□□ -1.38
NF1-209ENST00000479536 IGFLR1Q9H665 355 aa6.44□□□□□ -1.38
NF1-209ENST00000479536 JPH1Q9HDC5 661 aaPredicted RBP6.44□□□□□ -1.38
NF1-209ENST00000479536 BRD7Q9NPI1 651 aa6.44□□□□□ -1.38
NF1-209ENST00000479536 PSME1Q06323 249 aa6.43□□□□□ -1.38
NF1-209ENST00000479536 SLC9A9Q8IVB4 645 aa6.43□□□□□ -1.38
NF1-209ENST00000479536 NUDT8Q8WV74 236 aa6.43□□□□□ -1.38
NF1-209ENST00000479536 SSBP4Q9BWG4 385 aaPredicted RBP6.43□□□□□ -1.38
NF1-209ENST00000479536 ZNF358Q9NW07 568 aa6.43□□□□□ -1.38
NF1-209ENST00000479536 GPC6Q9Y625 555 aaPredicted RBP6.43□□□□□ -1.38
NF1-209ENST00000479536 ACIN1Q9UKV3 1341 aaKnown RBP6.43□□□□□ -1.38
NF1-209ENST00000479536 SERTM1A2A2V5 107 aa6.42□□□□□ -1.38
NF1-209ENST00000479536 SEMA3FQ13275 785 aa6.42□□□□□ -1.38
NF1-209ENST00000479536 SH3PXD2AQ5TCZ1 1133 aa6.42□□□□□ -1.38
NF1-209ENST00000479536 C7orf43Q8WVR3 580 aa6.42□□□□□ -1.38
NF1-209ENST00000479536 HSH2DQ96JZ2 352 aa6.42□□□□□ -1.38
NF1-209ENST00000479536 UBE2OQ9C0C9 1292 aaKnown RBP6.42□□□□□ -1.38
NF1-209ENST00000479536 RNF112Q9ULX5 631 aa6.42□□□□□ -1.38
NF1-209ENST00000479536 KCNH4Q9UQ05 1017 aa6.42□□□□□ -1.38
NF1-209ENST00000479536 CCDC9Q9Y3X0 531 aaKnown RBP6.42□□□□□ -1.38
NF1-209ENST00000479536 SFI1A8K8P3 1242 aa6.41□□□□□ -1.38
NF1-209ENST00000479536 AEBP1Q8IUX7 1158 aa6.41□□□□□ -1.38
NF1-209ENST00000479536 DMRTC2Q8IXT2 367 aaPredicted RBP6.41□□□□□ -1.38
NF1-209ENST00000479536 TNS4Q8IZW8 715 aa6.41□□□□□ -1.38
NF1-209ENST00000479536 SLC6A14Q9UN76 642 aa6.41□□□□□ -1.38
NF1-209ENST00000479536 PIK3CDO00329 1044 aa6.4□□□□□ -1.38
NF1-209ENST00000479536 GTF2IP78347 998 aa6.4□□□□□ -1.38
NF1-209ENST00000479536 EML3Q32P44 896 aa6.4□□□□□ -1.38
NF1-209ENST00000479536 FMR1NBQ8N0W7 255 aaPredicted RBP6.4□□□□□ -1.38
NF1-209ENST00000479536 PBXIP1Q96AQ6 731 aa6.4□□□□□ -1.38
NF1-209ENST00000479536 ALG2Q9H553 416 aa6.4□□□□□ -1.38
NF1-209ENST00000479536 PCMTD2Q9NV79 361 aa6.4□□□□□ -1.38
NF1-209ENST00000479536 NOD1Q9Y239 953 aa6.4□□□□□ -1.38
NF1-209ENST00000479536 PAX4O43316 350 aa6.39□□□□□ -1.39
NF1-209ENST00000479536 RFX1P22670 979 aa6.39□□□□□ -1.39
NF1-209ENST00000479536 AFF1P51825 1210 aaKnown RBP6.39□□□□□ -1.39
NF1-209ENST00000479536 EPHA4P54764 986 aa6.39□□□□□ -1.39
NF1-209ENST00000479536 KCNQ4P56696 695 aa6.39□□□□□ -1.39
NF1-209ENST00000479536 CFAP70Q5T0N1 1121 aa6.39□□□□□ -1.39
NF1-209ENST00000479536 PSAPL1Q6NUJ1 521 aa6.39□□□□□ -1.39
NF1-209ENST00000479536 PPP1R12CQ9BZL4 782 aa6.39□□□□□ -1.39
NF1-209ENST00000479536 ANKIB1Q9P2G1 1089 aa6.39□□□□□ -1.39
NF1-209ENST00000479536 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.38□□□□□ -1.39
NF1-209ENST00000479536 COBLO75128 1261 aa6.38□□□□□ -1.39
NF1-209ENST00000479536 SOX11P35716 441 aa6.38□□□□□ -1.39
NF1-209ENST00000479536 TYRO3Q06418 890 aa6.38□□□□□ -1.39
NF1-209ENST00000479536 PDE4CQ08493 712 aa6.38□□□□□ -1.39
NF1-209ENST00000479536 ZNF280CQ8ND82 737 aa6.38□□□□□ -1.39
NF1-209ENST00000479536 WFDC12Q8WWY7 111 aa6.38□□□□□ -1.39
NF1-209ENST00000479536 HCN4Q9Y3Q4 1203 aa6.38□□□□□ -1.39
NF1-209ENST00000479536 RGS9O75916 674 aaPredicted RBP6.37□□□□□ -1.39
NF1-209ENST00000479536 SKIP12755 728 aa6.37□□□□□ -1.39
NF1-209ENST00000479536 TXKP42681 527 aa6.37□□□□□ -1.39
NF1-209ENST00000479536 RANGAP1P46060 587 aaPredicted RBP6.37□□□□□ -1.39
NF1-209ENST00000479536 IREB2P48200 963 aaKnown RBP6.37□□□□□ -1.39
NF1-209ENST00000479536 SRPK2P78362 688 aaKnown RBP6.37□□□□□ -1.39
NF1-209ENST00000479536 COL17A1Q9UMD9 1497 aaPredicted RBP6.36□□□□□ -1.39
NF1-209ENST00000479536 PALM3A6NDB9 673 aaPredicted RBP6.36□□□□□ -1.39
NF1-209ENST00000479536 C1orf53Q5VUE5 145 aa6.36□□□□□ -1.39
NF1-209ENST00000479536 NPM2Q86SE8 214 aaKnown RBP6.36□□□□□ -1.39
NF1-209ENST00000479536 SUSD3Q96L08 255 aa6.36□□□□□ -1.39
NF1-209ENST00000479536 PHACTR1Q9C0D0 580 aa6.36□□□□□ -1.39
NF1-209ENST00000479536 DNAJB12Q9NXW2 375 aaKnown RBP6.36□□□□□ -1.39
NF1-209ENST00000479536 CHMP3Q9Y3E7 222 aa6.36□□□□□ -1.39
NF1-209ENST00000479536 NOS3P29474 1203 aa6.35□□□□□ -1.39
NF1-209ENST00000479536 LMOD1P29536 600 aaPredicted RBP6.35□□□□□ -1.39
NF1-209ENST00000479536 SSTR4P31391 388 aa6.35□□□□□ -1.39
NF1-209ENST00000479536 PSMA6P60900 246 aaKnown RBP6.35□□□□□ -1.39
NF1-209ENST00000479536 UCN2Q96RP3 112 aa6.35□□□□□ -1.39
NF1-209ENST00000479536 TFIP11Q9UBB9 837 aaKnown RBP6.35□□□□□ -1.39
NF1-209ENST00000479536 NAGPAQ9UK23 515 aa6.35□□□□□ -1.39
NF1-209ENST00000479536 NCOA4Q13772 614 aa6.34□□□□□ -1.39
NF1-209ENST00000479536 MSL1Q68DK7 614 aa6.34□□□□□ -1.39
NF1-209ENST00000479536 PRR23CQ6ZRP0 262 aa6.34□□□□□ -1.39
NF1-209ENST00000479536 MEGF10Q96KG7 1140 aa6.34□□□□□ -1.39
NF1-209ENST00000479536 PNMA5Q96PV4 448 aa6.34□□□□□ -1.39
NF1-209ENST00000479536 TSPAN10Q9H1Z9 355 aaPredicted RBP6.34□□□□□ -1.39
NF1-209ENST00000479536 USTQ9Y2C2 406 aa6.34□□□□□ -1.39
NF1-209ENST00000479536 LZTS3O60299 673 aaPredicted RBP6.33□□□□□ -1.4
NF1-209ENST00000479536 YBX3P16989 372 aaKnown RBP eCLIP6.33□□□□□ -1.4
NF1-209ENST00000479536 ILDR2Q71H61 639 aa6.33□□□□□ -1.4
NF1-209ENST00000479536 FBXO11Q86XK2 927 aa6.33□□□□□ -1.4
NF1-209ENST00000479536 DTWD1Q8N5C7 304 aa6.33□□□□□ -1.4
NF1-209ENST00000479536 CPB1P15086 417 aa6.32□□□□□ -1.4
NF1-209ENST00000479536 NFKB1P19838 968 aa6.32□□□□□ -1.4
NF1-209ENST00000479536 IRAK1P51617 712 aa6.32□□□□□ -1.4
NF1-209ENST00000479536 HIRAP54198 1017 aaPredicted RBP6.32□□□□□ -1.4
NF1-209ENST00000479536 BTLAQ7Z6A9 289 aa6.32□□□□□ -1.4
NF1-209ENST00000479536 FAM35AQ86V20 835 aa6.32□□□□□ -1.4
NF1-209ENST00000479536 DEPDC4Q8N2C3 294 aa6.32□□□□□ -1.4
NF1-209ENST00000479536 TPCN2Q8NHX9 752 aa6.32□□□□□ -1.4
NF1-209ENST00000479536 GZF1Q9H116 711 aaPredicted RBP6.32□□□□□ -1.4
NF1-209ENST00000479536 MAFBQ9Y5Q3 323 aaPredicted RBP6.32□□□□□ -1.4
NF1-209ENST00000479536 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.32□□□□□ -1.4
NF1-209ENST00000479536 FSTP19883 344 aa6.31□□□□□ -1.4
NF1-209ENST00000479536 FMNL2Q96PY5 1086 aa6.31□□□□□ -1.4
NF1-209ENST00000479536 GSX2Q9BZM3 304 aa6.31□□□□□ -1.4
NF1-209ENST00000479536 EFCC1Q9HA90 598 aa6.31□□□□□ -1.4
NF1-209ENST00000479536 PATL2C9JE40 543 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms