RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 SYNE4Q8N205 404 aa21.7■■□□□ 1.06
PHF1-207ENST00000479029 RBM17Q96I25 401 aaKnown RBP21.7■■□□□ 1.06
PHF1-207ENST00000479029 UTP14AQ9BVJ6 771 aaKnown RBP21.7■■□□□ 1.06
PHF1-207ENST00000479029 CACNA1SQ13698 1873 aa21.69■■□□□ 1.06
PHF1-207ENST00000479029 DICER1Q9UPY3 1922 aaKnown RBP21.69■■□□□ 1.06
PHF1-207ENST00000479029 KRT24Q2M2I5 525 aa21.69■■□□□ 1.06
PHF1-207ENST00000479029 HSP90AB3PQ58FF7 597 aa21.69■■□□□ 1.06
PHF1-207ENST00000479029 XAGE3Q8WTP9 111 aa21.69■■□□□ 1.06
PHF1-207ENST00000479029 CRAMP1Q96RY5 1269 aa21.69■■□□□ 1.06
PHF1-207ENST00000479029 DDX21Q9NR30 783 aaKnown RBP eCLIP21.69■■□□□ 1.06
PHF1-207ENST00000479029 RIC1Q4ADV7 1423 aa21.69■■□□□ 1.06
PHF1-207ENST00000479029 GRIPAP1Q4V328 841 aa21.68■■□□□ 1.06
PHF1-207ENST00000479029 NLRP3Q96P20 1036 aa21.68■■□□□ 1.06
PHF1-207ENST00000479029 PSMD1Q99460 953 aa21.68■■□□□ 1.06
PHF1-207ENST00000479029 WDR90Q96KV7 1748 aa21.68■■□□□ 1.06
PHF1-207ENST00000479029 IQCA1LA6NCM1 817 aa21.67■■□□□ 1.06
PHF1-207ENST00000479029 IARSP41252 1262 aaKnown RBP21.67■■□□□ 1.06
PHF1-207ENST00000479029 SLC10A5Q5PT55 438 aa21.67■■□□□ 1.06
PHF1-207ENST00000479029 KLRG1Q96E93 195 aa21.67■■□□□ 1.06
PHF1-207ENST00000479029 CFAP44Q96MT7 982 aa21.67■■□□□ 1.06
PHF1-207ENST00000479029 HOXB7P09629 217 aa21.66■■□□□ 1.06
PHF1-207ENST00000479029 HDGFL1Q5TGJ6 251 aa21.66■■□□□ 1.06
PHF1-207ENST00000479029 L3MBTL3Q96JM7 780 aaPredicted RBP21.66■■□□□ 1.06
PHF1-207ENST00000479029 RNF123Q5XPI4 1314 aa21.65■■□□□ 1.06
PHF1-207ENST00000479029 TCIRG1Q13488 830 aa21.65■■□□□ 1.06
PHF1-207ENST00000479029 C3orf67Q6ZVT6 689 aa21.65■■□□□ 1.06
PHF1-207ENST00000479029 JDP2Q8WYK2 163 aa21.65■■□□□ 1.06
PHF1-207ENST00000479029 TMX4Q9H1E5 349 aaPredicted RBP21.65■■□□□ 1.06
PHF1-207ENST00000479029 CHPF2Q9P2E5 772 aa21.65■■□□□ 1.06
PHF1-207ENST00000479029 APAF1O14727 1248 aa21.64■■□□□ 1.05
PHF1-207ENST00000479029 PPEF1O14829 653 aaPredicted RBP21.64■■□□□ 1.05
PHF1-207ENST00000479029 CHADLQ6NUI6 762 aa21.64■■□□□ 1.05
PHF1-207ENST00000479029 NLRP10Q86W26 655 aa21.64■■□□□ 1.05
PHF1-207ENST00000479029 DBF4Q9UBU7 674 aaPredicted RBP21.64■■□□□ 1.05
PHF1-207ENST00000479029 FZD9O00144 591 aa21.63■■□□□ 1.05
PHF1-207ENST00000479029 TCERG1O14776 1098 aaKnown RBP21.63■■□□□ 1.05
PHF1-207ENST00000479029 CALD1Q05682 793 aaKnown RBP21.63■■□□□ 1.05
PHF1-207ENST00000479029 TRMT112Q9UI30 125 aaKnown RBP21.63■■□□□ 1.05
PHF1-207ENST00000479029 ZNF541Q9H0D2 1346 aa21.62■■□□□ 1.05
PHF1-207ENST00000479029 DUSP27Q5VZP5 1158 aa21.62■■□□□ 1.05
PHF1-207ENST00000479029 MBIPQ9NS73 344 aa21.62■■□□□ 1.05
PHF1-207ENST00000479029 ANKRD13DQ6ZTN6 518 aa21.61■■□□□ 1.05
PHF1-207ENST00000479029 PLBD2Q8NHP8 589 aa21.61■■□□□ 1.05
PHF1-207ENST00000479029 TAF1DQ9H5J8 278 aaPredicted RBP21.61■■□□□ 1.05
PHF1-207ENST00000479029 HYPKQ9NX55 129 aa21.61■■□□□ 1.05
PHF1-207ENST00000479029 SNED1Q8TER0 1413 aa21.61■■□□□ 1.05
PHF1-207ENST00000479029 ZNF853P0CG23 659 aa21.6■■□□□ 1.05
PHF1-207ENST00000479029 POTEIP0CG38 1075 aa21.6■■□□□ 1.05
PHF1-207ENST00000479029 POTEJP0CG39 1038 aa21.6■■□□□ 1.05
PHF1-207ENST00000479029 HCLS1P14317 486 aaPredicted RBP21.6■■□□□ 1.05
PHF1-207ENST00000479029 GPC2Q8N158 579 aa21.6■■□□□ 1.05
PHF1-207ENST00000479029 JMYQ8N9B5 988 aa21.6■■□□□ 1.05
PHF1-207ENST00000479029 IFT57Q9NWB7 429 aa21.6■■□□□ 1.05
PHF1-207ENST00000479029 HACL1Q9UJ83 578 aa21.6■■□□□ 1.05
PHF1-207ENST00000479029 ATP6V0A2Q9Y487 856 aa21.6■■□□□ 1.05
PHF1-207ENST00000479029 SH3TC1Q8TE82 1336 aa21.59■■□□□ 1.05
PHF1-207ENST00000479029 BBOX1O75936 387 aa21.59■■□□□ 1.05
PHF1-207ENST00000479029 EIF6P56537 245 aaKnown RBP21.59■■□□□ 1.05
PHF1-207ENST00000479029 GNAI1P63096 354 aa21.59■■□□□ 1.05
PHF1-207ENST00000479029 LDHDQ86WU2 507 aa21.59■■□□□ 1.05
PHF1-207ENST00000479029 LARGE2Q8N3Y3 721 aa21.59■■□□□ 1.05
PHF1-207ENST00000479029 ABCC4O15439 1325 aa21.57■■□□□ 1.04
PHF1-207ENST00000479029 EAPPQ56P03 285 aaPredicted RBP21.57■■□□□ 1.04
PHF1-207ENST00000479029 IFFO2Q5TF58 517 aa21.57■■□□□ 1.04
PHF1-207ENST00000479029 DDX46Q7L014 1031 aaKnown RBP21.57■■□□□ 1.04
PHF1-207ENST00000479029 PCNTO95613 3336 aa21.56■■□□□ 1.04
PHF1-207ENST00000479029 EPHX2P34913 555 aa21.56■■□□□ 1.04
PHF1-207ENST00000479029 PNMA8AQ86V59 439 aaPredicted RBP21.56■■□□□ 1.04
PHF1-207ENST00000479029 CLEC11AQ9Y240 323 aa21.56■■□□□ 1.04
PHF1-207ENST00000479029 GJA3Q9Y6H8 435 aa21.56■■□□□ 1.04
PHF1-207ENST00000479029 ZEB1P37275 1124 aaPredicted RBP21.55■■□□□ 1.04
PHF1-207ENST00000479029 SLC51AQ86UW1 340 aa21.55■■□□□ 1.04
PHF1-207ENST00000479029 SP8Q8IXZ3 490 aa21.55■■□□□ 1.04
PHF1-207ENST00000479029 ZNF428Q96B54 188 aa21.55■■□□□ 1.04
PHF1-207ENST00000479029 ISCA1Q9BUE6 129 aa21.55■■□□□ 1.04
PHF1-207ENST00000479029 VPS33BQ9H267 617 aa21.55■■□□□ 1.04
PHF1-207ENST00000479029 SCN4AP35499 1836 aa21.55■■□□□ 1.04
PHF1-207ENST00000479029 ATP5J2-PTCD1G3V325 749 aa21.54■■□□□ 1.04
PHF1-207ENST00000479029 ELL2O00472 640 aaPredicted RBP21.54■■□□□ 1.04
PHF1-207ENST00000479029 PPIP5K2O43314 1243 aa21.54■■□□□ 1.04
PHF1-207ENST00000479029 NIM1KQ8IY84 436 aa21.54■■□□□ 1.04
PHF1-207ENST00000479029 SUPT20HQ8NEM7 779 aa21.54■■□□□ 1.04
PHF1-207ENST00000479029 CHMP4AQ9BY43 222 aa21.54■■□□□ 1.04
PHF1-207ENST00000479029 CREBZFQ9NS37 354 aa21.54■■□□□ 1.04
PHF1-207ENST00000479029 DPP8Q6V1X1 898 aaPredicted RBP21.53■■□□□ 1.04
PHF1-207ENST00000479029 LMOD1P29536 600 aaPredicted RBP21.52■■□□□ 1.04
PHF1-207ENST00000479029 GOLGA2Q08379 1002 aa21.52■■□□□ 1.04
PHF1-207ENST00000479029 TRIM28Q13263 835 aaKnown RBP21.52■■□□□ 1.04
PHF1-207ENST00000479029 GRAPQ13588 217 aa21.52■■□□□ 1.04
PHF1-207ENST00000479029 RIC3Q7Z5B4 369 aa21.52■■□□□ 1.04
PHF1-207ENST00000479029 MPNDQ8N594 471 aa21.52■■□□□ 1.04
PHF1-207ENST00000479029 GRAPLQ8TC17 118 aaPredicted RBP21.52■■□□□ 1.04
PHF1-207ENST00000479029 FAM89AQ96GI7 184 aa21.52■■□□□ 1.04
PHF1-207ENST00000479029 RTFDC1Q9BY42 306 aaPredicted RBP21.52■■□□□ 1.04
PHF1-207ENST00000479029 AOC3Q16853 763 aa21.51■■□□□ 1.03
PHF1-207ENST00000479029 TMC4Q7Z404 712 aa21.51■■□□□ 1.03
PHF1-207ENST00000479029 PASKQ96RG2 1323 aa21.51■■□□□ 1.03
PHF1-207ENST00000479029 ITGBL1O95965 494 aaPredicted RBP21.5■■□□□ 1.03
PHF1-207ENST00000479029 C8orf58Q8NAV2 365 aa21.5■■□□□ 1.03
PHF1-207ENST00000479029 ANKRD36CQ5JPF3 1778 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms