RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ATP5J2-PTCD1G3V325 749 aa10.69□□□□□ -0.7
HDAC6-221ENST00000477561 NFKBIEO00221 500 aa10.69□□□□□ -0.7
HDAC6-221ENST00000477561 TCIRG1Q13488 830 aa10.69□□□□□ -0.7
HDAC6-221ENST00000477561 PARP10Q53GL7 1025 aa10.69□□□□□ -0.7
HDAC6-221ENST00000477561 HSP90AB3PQ58FF7 597 aa10.69□□□□□ -0.7
HDAC6-221ENST00000477561 OLFM4Q6UX06 510 aa10.69□□□□□ -0.7
HDAC6-221ENST00000477561 C3orf67Q6ZVT6 689 aa10.69□□□□□ -0.7
HDAC6-221ENST00000477561 NLRP10Q86W26 655 aa10.69□□□□□ -0.7
HDAC6-221ENST00000477561 SYNE4Q8N205 404 aa10.69□□□□□ -0.7
HDAC6-221ENST00000477561 UTP14AQ9BVJ6 771 aaKnown RBP10.69□□□□□ -0.7
HDAC6-221ENST00000477561 RIC3Q7Z5B4 369 aa10.68□□□□□ -0.7
HDAC6-221ENST00000477561 PLBD2Q8NHP8 589 aa10.68□□□□□ -0.7
HDAC6-221ENST00000477561 TRMT112Q9UI30 125 aaKnown RBP10.68□□□□□ -0.7
HDAC6-221ENST00000477561 SLX4Q8IY92 1834 aa10.68□□□□□ -0.7
HDAC6-221ENST00000477561 TNRC6CQ9HCJ0 1690 aaKnown RBP10.67□□□□□ -0.7
HDAC6-221ENST00000477561 IL16Q14005 1332 aa10.67□□□□□ -0.7
HDAC6-221ENST00000477561 HCLS1P14317 486 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-221ENST00000477561 LMNB1P20700 586 aa10.67□□□□□ -0.7
HDAC6-221ENST00000477561 ALDH1B1P30837 517 aa10.67□□□□□ -0.7
HDAC6-221ENST00000477561 C1QTNF8P60827 252 aa10.67□□□□□ -0.7
HDAC6-221ENST00000477561 TWISTNBQ3B726 338 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-221ENST00000477561 RTL5Q5HYW3 569 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-221ENST00000477561 CCDC30Q5VVM6 783 aa10.67□□□□□ -0.7
HDAC6-221ENST00000477561 WDR63Q8IWG1 891 aa10.67□□□□□ -0.7
HDAC6-221ENST00000477561 RPGRQ92834 1020 aaKnown RBP10.67□□□□□ -0.7
HDAC6-221ENST00000477561 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-221ENST00000477561 IBTKQ9P2D0 1353 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-221ENST00000477561 CACNA1SQ13698 1873 aa10.66□□□□□ -0.7
HDAC6-221ENST00000477561 FANCIQ9NVI1 1328 aa10.66□□□□□ -0.7
HDAC6-221ENST00000477561 GOLGA2Q08379 1002 aa10.66□□□□□ -0.7
HDAC6-221ENST00000477561 CRY2Q49AN0 593 aa10.66□□□□□ -0.7
HDAC6-221ENST00000477561 SLC10A5Q5PT55 438 aa10.66□□□□□ -0.7
HDAC6-221ENST00000477561 SLC51AQ86UW1 340 aa10.66□□□□□ -0.7
HDAC6-221ENST00000477561 C7orf43Q8WVR3 580 aa10.66□□□□□ -0.7
HDAC6-221ENST00000477561 NLRP3Q96P20 1036 aa10.66□□□□□ -0.7
HDAC6-221ENST00000477561 ISCA1Q9BUE6 129 aa10.66□□□□□ -0.7
HDAC6-221ENST00000477561 NMRK2Q9NPI5 230 aa10.66□□□□□ -0.7
HDAC6-221ENST00000477561 EXOSC9Q06265 439 aaKnown RBP10.65□□□□□ -0.7
HDAC6-221ENST00000477561 CCDC93Q567U6 631 aa10.65□□□□□ -0.7
HDAC6-221ENST00000477561 G2E3Q7L622 706 aa10.65□□□□□ -0.7
HDAC6-221ENST00000477561 FAM89AQ96GI7 184 aa10.65□□□□□ -0.7
HDAC6-221ENST00000477561 RBM17Q96I25 401 aaKnown RBP10.65□□□□□ -0.7
HDAC6-221ENST00000477561 MYD88Q99836 296 aa10.65□□□□□ -0.7
HDAC6-221ENST00000477561 STK31Q9BXU1 1019 aa10.65□□□□□ -0.7
HDAC6-221ENST00000477561 TAOK3Q9H2K8 898 aa10.65□□□□□ -0.7
HDAC6-221ENST00000477561 SH3TC1Q8TE82 1336 aa10.64□□□□□ -0.71
HDAC6-221ENST00000477561 SBF1O95248 1867 aa10.64□□□□□ -0.71
HDAC6-221ENST00000477561 KIF3CO14782 793 aa10.64□□□□□ -0.71
HDAC6-221ENST00000477561 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
HDAC6-221ENST00000477561 HOXA10P31260 410 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-221ENST00000477561 SOGA3Q5TF21 947 aa10.64□□□□□ -0.71
HDAC6-221ENST00000477561 JARID2Q92833 1246 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-221ENST00000477561 CHMP4AQ9BY43 222 aa10.64□□□□□ -0.71
HDAC6-221ENST00000477561 RRAGCQ9HB90 399 aa10.64□□□□□ -0.71
HDAC6-221ENST00000477561 ANKRD36CQ5JPF3 1778 aa10.63□□□□□ -0.71
HDAC6-221ENST00000477561 PPEF1O14829 653 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-221ENST00000477561 VAMP4O75379 141 aa10.63□□□□□ -0.71
HDAC6-221ENST00000477561 DDX58O95786 925 aaKnown RBP10.63□□□□□ -0.71
HDAC6-221ENST00000477561 CRAMP1Q96RY5 1269 aa10.63□□□□□ -0.71
HDAC6-221ENST00000477561 ZNF277Q9NRM2 450 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-221ENST00000477561 MAP3K2Q9Y2U5 619 aa10.63□□□□□ -0.71
HDAC6-221ENST00000477561 RIC1Q4ADV7 1423 aa10.63□□□□□ -0.71
HDAC6-221ENST00000477561 RNF123Q5XPI4 1314 aa10.62□□□□□ -0.71
HDAC6-221ENST00000477561 KDM2BQ8NHM5 1336 aa10.62□□□□□ -0.71
HDAC6-221ENST00000477561 LTBP3Q9NS15 1303 aa10.62□□□□□ -0.71
HDAC6-221ENST00000477561 FER1L6Q2WGJ9 1857 aa10.62□□□□□ -0.71
HDAC6-221ENST00000477561 PI4KAP2A4QPH2 592 aa10.62□□□□□ -0.71
HDAC6-221ENST00000477561 FKBP4Q02790 459 aaKnown RBP eCLIP10.62□□□□□ -0.71
HDAC6-221ENST00000477561 TRIM28Q13263 835 aaKnown RBP10.62□□□□□ -0.71
HDAC6-221ENST00000477561 RTKN2Q8IZC4 609 aa10.62□□□□□ -0.71
HDAC6-221ENST00000477561 PI4KAP1Q8N8J0 262 aa10.62□□□□□ -0.71
HDAC6-221ENST00000477561 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-221ENST00000477561 MYH16Q9H6N6 1097 aa10.62□□□□□ -0.71
HDAC6-221ENST00000477561 ARFGEF2Q9Y6D5 1785 aa10.62□□□□□ -0.71
HDAC6-221ENST00000477561 CCDC88AQ3V6T2 1871 aa10.61□□□□□ -0.71
HDAC6-221ENST00000477561 ABCC4O15439 1325 aa10.61□□□□□ -0.71
HDAC6-221ENST00000477561 IRS4O14654 1257 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-221ENST00000477561 KSR2Q6VAB6 950 aa10.61□□□□□ -0.71
HDAC6-221ENST00000477561 DDX46Q7L014 1031 aaKnown RBP10.61□□□□□ -0.71
HDAC6-221ENST00000477561 YTHDC1Q96MU7 727 aaKnown RBP10.61□□□□□ -0.71
HDAC6-221ENST00000477561 GLTPD2A6NH11 291 aa10.6□□□□□ -0.71
HDAC6-221ENST00000477561 CENPBP07199 599 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-221ENST00000477561 DPY19L2Q6NUT2 758 aa10.6□□□□□ -0.71
HDAC6-221ENST00000477561 C16orf71Q8IYS4 520 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-221ENST00000477561 ZBTB38Q8NAP3 1195 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-221ENST00000477561 CCDC191Q8NCU4 936 aa10.6□□□□□ -0.71
HDAC6-221ENST00000477561 CWC25Q9NXE8 425 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-221ENST00000477561 ZNF521Q96K83 1311 aa10.59□□□□□ -0.71
HDAC6-221ENST00000477561 ZC3H4Q9UPT8 1303 aaKnown RBP10.59□□□□□ -0.71
HDAC6-221ENST00000477561 DDNO94850 711 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-221ENST00000477561 IGKV5-2P06315 115 aa10.59□□□□□ -0.71
HDAC6-221ENST00000477561 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
HDAC6-221ENST00000477561 FLIIQ13045 1269 aa10.59□□□□□ -0.71
HDAC6-221ENST00000477561 FKBP5Q13451 457 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-221ENST00000477561 GRAPQ13588 217 aa10.59□□□□□ -0.71
HDAC6-221ENST00000477561 CWF19L2Q2TBE0 894 aaKnown RBP10.59□□□□□ -0.71
HDAC6-221ENST00000477561 CC2D2BQ6DHV5 1058 aa10.59□□□□□ -0.71
HDAC6-221ENST00000477561 GRAPLQ8TC17 118 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-221ENST00000477561 CCDC85AQ96PX6 553 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-221ENST00000477561 TMX4Q9H1E5 349 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms