RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 SIL1Q9H173 461 aa13.95□□□□□ -0.18
NUP188-205ENST00000477069 SNRKQ9NRH2 765 aa13.95□□□□□ -0.18
NUP188-205ENST00000477069 A0A087WZG4 1122 aa13.95□□□□□ -0.18
NUP188-205ENST00000477069 CWC27Q6UX04 472 aaKnown RBP13.95□□□□□ -0.18
NUP188-205ENST00000477069 JARID2Q92833 1246 aaPredicted RBP13.95□□□□□ -0.18
NUP188-205ENST00000477069 NRAPQ86VF7 1730 aa13.95□□□□□ -0.18
NUP188-205ENST00000477069 A1BGP04217 495 aa13.94□□□□□ -0.18
NUP188-205ENST00000477069 FOXO4P98177 505 aa13.94□□□□□ -0.18
NUP188-205ENST00000477069 PKP1Q13835 747 aa13.94□□□□□ -0.18
NUP188-205ENST00000477069 CCDC8Q9H0W5 538 aaPredicted RBP13.94□□□□□ -0.18
NUP188-205ENST00000477069 SNX14Q9Y5W7 946 aa13.94□□□□□ -0.18
NUP188-205ENST00000477069 ANKRD36CQ5JPF3 1778 aa13.94□□□□□ -0.18
NUP188-205ENST00000477069 FSD2A1L4K1 749 aa13.94□□□□□ -0.18
NUP188-205ENST00000477069 BAG4O95429 457 aaKnown RBP13.94□□□□□ -0.18
NUP188-205ENST00000477069 KCNB2Q92953 911 aa13.94□□□□□ -0.18
NUP188-205ENST00000477069 ZDHHC9Q9Y397 364 aa13.94□□□□□ -0.18
NUP188-205ENST00000477069 PTMSP20962 102 aa13.93□□□□□ -0.18
NUP188-205ENST00000477069 BTG4Q9NY30 223 aa13.93□□□□□ -0.18
NUP188-205ENST00000477069 TTC14Q96N46 770 aa13.93□□□□□ -0.18
NUP188-205ENST00000477069 DIAPH3Q9NSV4 1193 aa13.93□□□□□ -0.18
NUP188-205ENST00000477069 JCADQ9P266 1359 aa13.92□□□□□ -0.18
NUP188-205ENST00000477069 RASEFQ8IZ41 740 aa13.92□□□□□ -0.18
NUP188-205ENST00000477069 RUFY2Q8WXA3 655 aa13.92□□□□□ -0.18
NUP188-205ENST00000477069 INTS4Q96HW7 963 aaKnown RBP13.92□□□□□ -0.18
NUP188-205ENST00000477069 DOT1LQ8TEK3 1739 aa13.92□□□□□ -0.18
NUP188-205ENST00000477069 TNNI3KQ59H18 835 aa13.92□□□□□ -0.18
NUP188-205ENST00000477069 CWC25Q9NXE8 425 aaPredicted RBP13.92□□□□□ -0.18
NUP188-205ENST00000477069 TMOD3Q9NYL9 352 aa13.92□□□□□ -0.18
NUP188-205ENST00000477069 FPGT-TNNI3KV9GXZ4 949 aa13.92□□□□□ -0.18
NUP188-205ENST00000477069 PTH1RQ03431 593 aa13.91□□□□□ -0.18
NUP188-205ENST00000477069 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
NUP188-205ENST00000477069 UPF3BQ9BZI7 483 aaKnown RBP13.91□□□□□ -0.18
NUP188-205ENST00000477069 DBNLQ9UJU6 430 aaKnown RBP13.91□□□□□ -0.18
NUP188-205ENST00000477069 LTBP4Q8N2S1 1624 aa13.91□□□□□ -0.18
NUP188-205ENST00000477069 CCDC191Q8NCU4 936 aa13.91□□□□□ -0.18
NUP188-205ENST00000477069 MED23Q9ULK4 1368 aa13.91□□□□□ -0.18
NUP188-205ENST00000477069 TFCP2Q12800 502 aa13.91□□□□□ -0.18
NUP188-205ENST00000477069 PIGBQ92521 554 aa13.91□□□□□ -0.18
NUP188-205ENST00000477069 BCL9O00512 1426 aa13.9□□□□□ -0.18
NUP188-205ENST00000477069 HIP1O00291 1037 aa13.9□□□□□ -0.18
NUP188-205ENST00000477069 SKOR2Q2VWA4 1001 aaPredicted RBP13.9□□□□□ -0.18
NUP188-205ENST00000477069 LMBR1LQ6UX01 489 aa13.9□□□□□ -0.18
NUP188-205ENST00000477069 ISCA1Q9BUE6 129 aa13.9□□□□□ -0.18
NUP188-205ENST00000477069 ATP5JP18859 108 aa13.9□□□□□ -0.18
NUP188-205ENST00000477069 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
NUP188-205ENST00000477069 ATG3Q9NT62 314 aa13.9□□□□□ -0.18
NUP188-205ENST00000477069 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.18
NUP188-205ENST00000477069 RFX7Q2KHR2 1363 aa13.9□□□□□ -0.18
NUP188-205ENST00000477069 NMIQ13287 307 aaPredicted RBP13.89□□□□□ -0.19
NUP188-205ENST00000477069 NECTIN1Q15223 517 aa13.89□□□□□ -0.19
NUP188-205ENST00000477069 ATG9AQ7Z3C6 839 aa13.89□□□□□ -0.19
NUP188-205ENST00000477069 FAM227BQ96M60 508 aa13.89□□□□□ -0.19
NUP188-205ENST00000477069 BOLA2Q9H3K6 86 aa13.89□□□□□ -0.19
NUP188-205ENST00000477069 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
NUP188-205ENST00000477069 ASAP1Q9ULH1 1129 aa13.89□□□□□ -0.19
NUP188-205ENST00000477069 GZF1Q9H116 711 aaPredicted RBP13.89□□□□□ -0.19
NUP188-205ENST00000477069 SPEF2Q9C093 1822 aa13.88□□□□□ -0.19
NUP188-205ENST00000477069 BRPF3Q9ULD4 1205 aa13.88□□□□□ -0.19
NUP188-205ENST00000477069 PHLPP1O60346 1717 aa13.88□□□□□ -0.19
NUP188-205ENST00000477069 A0A0D9SFI3 127 aa13.88□□□□□ -0.19
NUP188-205ENST00000477069 L1TD1Q5T7N2 865 aaKnown RBP13.88□□□□□ -0.19
NUP188-205ENST00000477069 MAP4K1Q92918 833 aa13.88□□□□□ -0.19
NUP188-205ENST00000477069 CICQ96RK0 1608 aaPredicted RBP13.88□□□□□ -0.19
NUP188-205ENST00000477069 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
NUP188-205ENST00000477069 TM6SF1Q9BZW5 370 aa13.87□□□□□ -0.19
NUP188-205ENST00000477069 ZNF609O15014 1411 aa13.87□□□□□ -0.19
NUP188-205ENST00000477069 RPAP1Q9BWH6 1393 aaPredicted RBP13.87□□□□□ -0.19
NUP188-205ENST00000477069 BRD1O95696 1058 aa13.87□□□□□ -0.19
NUP188-205ENST00000477069 DNAJC10Q8IXB1 793 aa13.87□□□□□ -0.19
NUP188-205ENST00000477069 RREB1Q92766 1687 aa13.87□□□□□ -0.19
NUP188-205ENST00000477069 NUP98P52948 1817 aa13.87□□□□□ -0.19
NUP188-205ENST00000477069 MYH3P11055 1940 aa13.87□□□□□ -0.19
NUP188-205ENST00000477069 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
NUP188-205ENST00000477069 TCIRG1Q13488 830 aa13.87□□□□□ -0.19
NUP188-205ENST00000477069 GPR108Q9NPR9 543 aa13.87□□□□□ -0.19
NUP188-205ENST00000477069 GOLGA6L22H0YM25 854 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 AK2P54819 239 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 RUFY3Q7L099 469 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 DBNDD2Q9BQY9 259 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 FSD1Q9BTV5 496 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 ZSWIM6Q9HCJ5 1215 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 LMBRD1Q9NUN5 540 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 GOLGA6L3A6NEY3 463 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 KLHL40Q2TBA0 621 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 ADCK5Q3MIX3 580 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 PRPF40BQ6NWY9 871 aaKnown RBP13.86□□□□□ -0.19
NUP188-205ENST00000477069 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
NUP188-205ENST00000477069 SLC4A9Q96Q91 983 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 HAUS7Q99871 368 aa13.86□□□□□ -0.19
NUP188-205ENST00000477069 EDC3Q96F86 508 aaKnown RBP13.85□□□□□ -0.19
NUP188-205ENST00000477069 RBM8AQ9Y5S9 174 aaKnown RBP13.85□□□□□ -0.19
NUP188-205ENST00000477069 CIAO1O76071 339 aa13.85□□□□□ -0.19
NUP188-205ENST00000477069 MCTP1Q6DN14 999 aa13.85□□□□□ -0.19
NUP188-205ENST00000477069 ISY1Q9ULR0 285 aaKnown RBP13.85□□□□□ -0.19
NUP188-205ENST00000477069 NWD2Q9ULI1 1742 aa13.85□□□□□ -0.19
NUP188-205ENST00000477069 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
NUP188-205ENST00000477069 CREB3L3Q68CJ9 461 aa13.84□□□□□ -0.19
NUP188-205ENST00000477069 PLA2G12BQ9BX93 195 aa13.84□□□□□ -0.19
NUP188-205ENST00000477069 XRCC6P12956 609 aaKnown RBP eCLIP13.84□□□□□ -0.19
NUP188-205ENST00000477069 IL15P40933 162 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms