RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 CEMIPQ8WUJ3 1361 aa12.12□□□□□ -0.47
SMC4-213ENST00000472282 SBF1O95248 1867 aa12.12□□□□□ -0.47
SMC4-213ENST00000472282 ATP10DQ9P241 1426 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 CACNA1SQ13698 1873 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 CCDC88AQ3V6T2 1871 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 ADCY9O60503 1353 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 COL15A1P39059 1388 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 KCNQ3O43525 872 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 DPEP1P16444 411 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 USPL1Q5W0Q7 1092 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 ZNF496Q96IT1 587 aaPredicted RBP12.11□□□□□ -0.47
SMC4-213ENST00000472282 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
SMC4-213ENST00000472282 GOLGB1Q14789 3259 aaKnown RBP12.11□□□□□ -0.47
SMC4-213ENST00000472282 KDM3BQ7LBC6 1761 aa12.1□□□□□ -0.47
SMC4-213ENST00000472282 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
SMC4-213ENST00000472282 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
SMC4-213ENST00000472282 PARP3Q9Y6F1 533 aa12.1□□□□□ -0.47
SMC4-213ENST00000472282 LAMB4A4D0S4 1761 aa12.1□□□□□ -0.47
SMC4-213ENST00000472282 COL11A2P13942 1736 aaPredicted RBP12.09□□□□□ -0.47
SMC4-213ENST00000472282 POLRMTO00411 1230 aaKnown RBP12.09□□□□□ -0.47
SMC4-213ENST00000472282 KCNA3P22001 575 aa12.09□□□□□ -0.47
SMC4-213ENST00000472282 CANXP27824 592 aaKnown RBP12.09□□□□□ -0.47
SMC4-213ENST00000472282 TM4SF1P30408 202 aa12.09□□□□□ -0.47
SMC4-213ENST00000472282 TGFB2P61812 414 aa12.09□□□□□ -0.47
SMC4-213ENST00000472282 TEFQ10587 303 aa12.09□□□□□ -0.47
SMC4-213ENST00000472282 WDR43Q15061 677 aaKnown RBP eCLIP12.09□□□□□ -0.475e-20■■■■■ 85.2
SMC4-213ENST00000472282 ZNF790Q6PG37 636 aa12.09□□□□□ -0.47
SMC4-213ENST00000472282 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
SMC4-213ENST00000472282 MRS2Q9HD23 443 aa12.09□□□□□ -0.47
SMC4-213ENST00000472282 FCHSD2O94868 740 aa12.08□□□□□ -0.48
SMC4-213ENST00000472282 DCTN1Q14203 1278 aa12.08□□□□□ -0.48
SMC4-213ENST00000472282 TTC5Q8N0Z6 440 aa12.08□□□□□ -0.48
SMC4-213ENST00000472282 NARFQ9UHQ1 456 aa12.08□□□□□ -0.48
SMC4-213ENST00000472282 BCS1LQ9Y276 419 aa12.08□□□□□ -0.48
SMC4-213ENST00000472282 PRAMEF22A3QJZ6 481 aa12.07□□□□□ -0.48
SMC4-213ENST00000472282 ZPR1O75312 459 aa12.07□□□□□ -0.48
SMC4-213ENST00000472282 CHRNA5P30532 468 aa12.07□□□□□ -0.48
SMC4-213ENST00000472282 PSEN2P49810 448 aa12.07□□□□□ -0.48
SMC4-213ENST00000472282 C1QTNF8P60827 252 aa12.07□□□□□ -0.48
SMC4-213ENST00000472282 NFIXQ14938 502 aa12.07□□□□□ -0.48
SMC4-213ENST00000472282 MCM10Q7L590 875 aa12.07□□□□□ -0.48
SMC4-213ENST00000472282 CARMIL3Q8ND23 1372 aa12.06□□□□□ -0.48
SMC4-213ENST00000472282 EIF5P55010 431 aaKnown RBP12.06□□□□□ -0.48
SMC4-213ENST00000472282 ZNF526Q8TF50 670 aaPredicted RBP12.06□□□□□ -0.48
SMC4-213ENST00000472282 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
SMC4-213ENST00000472282 GIGYF1O75420 1035 aaPredicted RBP12.05□□□□□ -0.48
SMC4-213ENST00000472282 A1BGP04217 495 aa12.05□□□□□ -0.48
SMC4-213ENST00000472282 NEFMP07197 916 aa12.05□□□□□ -0.48
SMC4-213ENST00000472282 PIP4K2AP48426 406 aaPredicted RBP12.05□□□□□ -0.48
SMC4-213ENST00000472282 DMRTA1Q5VZB9 504 aa12.05□□□□□ -0.48
SMC4-213ENST00000472282 CCDC146Q8IYE0 955 aa12.05□□□□□ -0.48
SMC4-213ENST00000472282 PLEKHF1Q96S99 279 aa12.05□□□□□ -0.48
SMC4-213ENST00000472282 ADAMTS8Q9UP79 889 aa12.05□□□□□ -0.48
SMC4-213ENST00000472282 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
SMC4-213ENST00000472282 FMNL2Q96PY5 1086 aa12.04□□□□□ -0.48
SMC4-213ENST00000472282 KCNK17Q96T54 332 aa12.04□□□□□ -0.48
SMC4-213ENST00000472282 TBC1D2BQ9UPU7 963 aa12.04□□□□□ -0.48
SMC4-213ENST00000472282 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
SMC4-213ENST00000472282 USP16Q9Y5T5 823 aa12.04□□□□□ -0.48
SMC4-213ENST00000472282 ARFGEF2Q9Y6D5 1785 aa12.03□□□□□ -0.48
SMC4-213ENST00000472282 NUP98P52948 1817 aa12.03□□□□□ -0.48
SMC4-213ENST00000472282 HRO43593 1189 aa12.03□□□□□ -0.48
SMC4-213ENST00000472282 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
SMC4-213ENST00000472282 STARD3NLO95772 234 aa12.03□□□□□ -0.48
SMC4-213ENST00000472282 SERPINB2P05120 415 aa12.03□□□□□ -0.48
SMC4-213ENST00000472282 TBC1D9BQ66K14 1250 aa12.03□□□□□ -0.48
SMC4-213ENST00000472282 BICDL1Q6ZP65 573 aa12.03□□□□□ -0.48
SMC4-213ENST00000472282 ARHGAP27Q6ZUM4 889 aa12.03□□□□□ -0.48
SMC4-213ENST00000472282 ZNF454Q8N9F8 522 aa12.03□□□□□ -0.48
SMC4-213ENST00000472282 PNNQ9H307 717 aaKnown RBP12.03□□□□□ -0.48
SMC4-213ENST00000472282 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
SMC4-213ENST00000472282 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
SMC4-213ENST00000472282 PNISRQ8TF01 805 aaKnown RBP12.02□□□□□ -0.49
SMC4-213ENST00000472282 RTF1Q92541 710 aaKnown RBP12.02□□□□□ -0.49
SMC4-213ENST00000472282 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
SMC4-213ENST00000472282 GPBP1L1Q9HC44 474 aaPredicted RBP12.02□□□□□ -0.49
SMC4-213ENST00000472282 MIS18AQ9NYP9 233 aa12.02□□□□□ -0.49
SMC4-213ENST00000472282 PIM2Q9P1W9 311 aa12.02□□□□□ -0.49
SMC4-213ENST00000472282 FER1L6Q2WGJ9 1857 aa12.02□□□□□ -0.49
SMC4-213ENST00000472282 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
SMC4-213ENST00000472282 IL6STP40189 918 aaPredicted RBP12.01□□□□□ -0.49
SMC4-213ENST00000472282 NFE2L2Q16236 605 aa12.01□□□□□ -0.49
SMC4-213ENST00000472282 CCDC24Q8N4L8 307 aa12.01□□□□□ -0.49
SMC4-213ENST00000472282 DDX27Q96GQ7 796 aaKnown RBP12.01□□□□□ -0.49
SMC4-213ENST00000472282 THUMPD2Q9BTF0 503 aaKnown RBP12.01□□□□□ -0.49
SMC4-213ENST00000472282 TEX13AQ9BXU3 409 aaPredicted RBP12.01□□□□□ -0.49
SMC4-213ENST00000472282 SLX4Q8IY92 1834 aa12.01□□□□□ -0.49
SMC4-213ENST00000472282 DICER1Q9UPY3 1922 aaKnown RBP12.01□□□□□ -0.49
SMC4-213ENST00000472282 A0A087WZG4 1122 aa12□□□□□ -0.49
SMC4-213ENST00000472282 CAMTA2O94983 1202 aa12□□□□□ -0.49
SMC4-213ENST00000472282 DALRD3Q5D0E6 543 aaKnown RBP12□□□□□ -0.49
SMC4-213ENST00000472282 FAM9BQ8IZU0 186 aa12□□□□□ -0.49
SMC4-213ENST00000472282 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
SMC4-213ENST00000472282 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
SMC4-213ENST00000472282 HTATSF1O43719 755 aaKnown RBP11.99□□□□□ -0.49
SMC4-213ENST00000472282 NBPF10Q6P3W6 841 aaKnown RBP11.99□□□□□ -0.49
SMC4-213ENST00000472282 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
SMC4-213ENST00000472282 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms