RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 FOXO3O43524 673 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 PDIA4P13667 645 aaKnown RBP3.92□□□□□ -1.78
CCNL1-214ENST00000471247 CLDN10P78369 228 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 TRIM32Q13049 653 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 WDR44Q5JSH3 913 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 DHX29Q7Z478 1369 aaKnown RBP3.92□□□□□ -1.78
CCNL1-214ENST00000471247 CDK2AP1O14519 115 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 PPP1R18Q6NYC8 613 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 MYO19Q96H55 970 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 ITSN1Q15811 1721 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 SPATA31C2B4DYI2 1134 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 PIK3CDO00329 1044 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 CD2BP2O95400 341 aaKnown RBP3.92□□□□□ -1.78
CCNL1-214ENST00000471247 ADH1CP00326 375 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 SPRYD7Q5W111 196 aa3.92□□□□□ -1.78
CCNL1-214ENST00000471247 C9orf84Q5VXU9 1444 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 ASXL2Q76L83 1435 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 KIF1AQ12756 1690 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 USP4Q13107 963 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 SNIP1Q8TAD8 396 aaKnown RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 TSC1Q92574 1164 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 CDK11AQ9UQ88 783 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 FCF1Q9Y324 198 aaKnown RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 PARP4Q9UKK3 1724 aaKnown RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 PIK3C2GO75747 1445 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 RREB1Q92766 1687 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 COL3A1P02461 1466 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 TULP4Q9NRJ4 1543 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 GIGYF1O75420 1035 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 SCNN1DP51172 638 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 COPS2P61201 443 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 NBPF20Q3BBV1 942 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 CXXC1Q9P0U4 656 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 NOVA2Q9UNW9 492 aaKnown RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 NOD1Q9Y239 953 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 IRX6P78412 446 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 C1orf53Q5VUE5 145 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 CC2D2BQ6DHV5 1058 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 FHDC1Q9C0D6 1143 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 DNAAF2Q9NVR5 837 aaKnown RBP3.91□□□□□ -1.78
CCNL1-214ENST00000471247 NHSL1Q5SYE7 1610 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 COL24A1Q17RW2 1714 aa3.91□□□□□ -1.78
CCNL1-214ENST00000471247 CSB-PGBD3P0DP91 1061 aa3.9□□□□□ -1.78
CCNL1-214ENST00000471247 RNF144AP50876 292 aaPredicted RBP3.9□□□□□ -1.78
CCNL1-214ENST00000471247 SLFNL1Q499Z3 407 aa3.9□□□□□ -1.78
CCNL1-214ENST00000471247 IGSF5Q9NSI5 407 aa3.9□□□□□ -1.78
CCNL1-214ENST00000471247 PLCH1Q4KWH8 1693 aa3.9□□□□□ -1.79
CCNL1-214ENST00000471247 TMEM229AB2RXF0 380 aa3.9□□□□□ -1.79
CCNL1-214ENST00000471247 TEAD4Q15561 434 aa3.9□□□□□ -1.79
CCNL1-214ENST00000471247 INTS6LQ5JSJ4 861 aaKnown RBP3.9□□□□□ -1.79
CCNL1-214ENST00000471247 KDF1Q8NAX2 398 aaPredicted RBP3.9□□□□□ -1.79
CCNL1-214ENST00000471247 OSBPL3Q9H4L5 887 aa3.9□□□□□ -1.79
CCNL1-214ENST00000471247 USP35Q9P2H5 1018 aa3.9□□□□□ -1.79
CCNL1-214ENST00000471247 ABCC6O95255 1503 aa3.9□□□□□ -1.79
CCNL1-214ENST00000471247 ZNF831Q5JPB2 1677 aa3.9□□□□□ -1.79
CCNL1-214ENST00000471247 UBR2Q8IWV8 1755 aa3.9□□□□□ -1.79
CCNL1-214ENST00000471247 LMOD1P29536 600 aaPredicted RBP3.9□□□□□ -1.79
CCNL1-214ENST00000471247 TMEM164Q5U3C3 297 aa3.9□□□□□ -1.79
CCNL1-214ENST00000471247 IQSEC3Q9UPP2 1182 aaPredicted RBP3.9□□□□□ -1.79
CCNL1-214ENST00000471247 DOLKQ9UPQ8 538 aa3.9□□□□□ -1.79
CCNL1-214ENST00000471247 FAM208AQ9UK61 1670 aaKnown RBP3.9□□□□□ -1.79
CCNL1-214ENST00000471247 TECPR2O15040 1411 aa3.89□□□□□ -1.79
CCNL1-214ENST00000471247 PTCD1O75127 700 aaKnown RBP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 IQSEC2Q5JU85 1478 aa3.89□□□□□ -1.79
CCNL1-214ENST00000471247 DNAJC14Q6Y2X3 702 aaPredicted RBP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 SND1Q7KZF4 910 aaKnown RBP eCLIP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 NAP1L5Q96NT1 182 aaPredicted RBP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 KCTD15Q96SI1 283 aaPredicted RBP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 ZNF646O15015 1829 aaPredicted RBP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 CARMIL2Q6F5E8 1435 aa3.89□□□□□ -1.79
CCNL1-214ENST00000471247 RC3H1Q5TC82 1133 aaKnown RBP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 DZIP3Q86Y13 1208 aaKnown RBP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 POLR3GLQ9BT43 218 aa3.89□□□□□ -1.79
CCNL1-214ENST00000471247 MKRN1Q9UHC7 482 aaKnown RBP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 ARID4AP29374 1257 aaPredicted RBP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 CRTC2Q53ET0 693 aaPredicted RBP3.89□□□□□ -1.79
CCNL1-214ENST00000471247 ZBTB33Q86T24 672 aa3.89□□□□□ -1.79
CCNL1-214ENST00000471247 CITED4Q96RK1 184 aa3.89□□□□□ -1.79
CCNL1-214ENST00000471247 A0A1B0GUL6 1792 aa3.88□□□□□ -1.79
CCNL1-214ENST00000471247 SKIP12755 728 aa3.88□□□□□ -1.79
CCNL1-214ENST00000471247 LARP1Q6PKG0 1096 aaKnown RBP3.88□□□□□ -1.79
CCNL1-214ENST00000471247 FAM200AQ8TCP9 573 aa3.88□□□□□ -1.79
CCNL1-214ENST00000471247 GRIP2Q9C0E4 1043 aa3.88□□□□□ -1.79
CCNL1-214ENST00000471247 ANKRD24Q8TF21 1146 aa3.88□□□□□ -1.79
CCNL1-214ENST00000471247 UBE2Q2Q8WVN8 375 aa3.88□□□□□ -1.79
CCNL1-214ENST00000471247 KDM3BQ7LBC6 1761 aa3.88□□□□□ -1.79
CCNL1-214ENST00000471247 SMG6Q86US8 1419 aaKnown RBP3.88□□□□□ -1.79
CCNL1-214ENST00000471247 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.88□□□□□ -1.79
CCNL1-214ENST00000471247 TSGA10IPQ3SY00 556 aa3.88□□□□□ -1.79
CCNL1-214ENST00000471247 CYP2U1Q7Z449 544 aa3.88□□□□□ -1.79
CCNL1-214ENST00000471247 ALKBH8Q96BT7 664 aaKnown RBP3.88□□□□□ -1.79
CCNL1-214ENST00000471247 ZNF358Q9NW07 568 aa3.88□□□□□ -1.79
CCNL1-214ENST00000471247 RBM19Q9Y4C8 960 aaKnown RBP3.88□□□□□ -1.79
CCNL1-214ENST00000471247 PKD1L3Q7Z443 1732 aa3.87□□□□□ -1.79
CCNL1-214ENST00000471247 SOWAHDA6NJG2 315 aa3.87□□□□□ -1.79
CCNL1-214ENST00000471247 INHAP05111 366 aa3.87□□□□□ -1.79
CCNL1-214ENST00000471247 NEFMP07197 916 aa3.87□□□□□ -1.79
CCNL1-214ENST00000471247 PCDHB9Q9Y5E1 797 aa3.87□□□□□ -1.79
CCNL1-214ENST00000471247 CDK12Q9NYV4 1490 aaPredicted RBP3.87□□□□□ -1.79
CCNL1-214ENST00000471247 TSPOAP1O95153 1857 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms