RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 ZNF541Q9H0D2 1346 aa9.17□□□□□ -0.94
SF3A3-205ENST00000470585 EIF6P56537 245 aaKnown RBP9.17□□□□□ -0.94
SF3A3-205ENST00000470585 CAPNS2Q96L46 248 aa9.17□□□□□ -0.94
SF3A3-205ENST00000470585 ABT1Q9ULW3 272 aaKnown RBP9.17□□□□□ -0.94
SF3A3-205ENST00000470585 CLEC11AQ9Y240 323 aa9.17□□□□□ -0.94
SF3A3-205ENST00000470585 BRPF1P55201 1214 aaPredicted RBP9.16□□□□□ -0.94
SF3A3-205ENST00000470585 IL17REQ8NFR9 667 aa9.16□□□□□ -0.94
SF3A3-205ENST00000470585 GPR101Q96P66 508 aaPredicted RBP9.16□□□□□ -0.94
SF3A3-205ENST00000470585 NYXQ9GZU5 481 aa9.16□□□□□ -0.94
SF3A3-205ENST00000470585 ZNF277Q9NRM2 450 aaPredicted RBP9.16□□□□□ -0.94
SF3A3-205ENST00000470585 TLL2Q9Y6L7 1015 aa9.16□□□□□ -0.94
SF3A3-205ENST00000470585 RNF123Q5XPI4 1314 aa9.15□□□□□ -0.94
SF3A3-205ENST00000470585 A1BGP04217 495 aa9.15□□□□□ -0.94
SF3A3-205ENST00000470585 HMOX1P09601 288 aa9.15□□□□□ -0.94
SF3A3-205ENST00000470585 SNRPA1P09661 255 aaKnown RBP9.15□□□□□ -0.94
SF3A3-205ENST00000470585 HOXA10P31260 410 aaPredicted RBP9.15□□□□□ -0.94
SF3A3-205ENST00000470585 MAP1SQ66K74 1059 aaPredicted RBP9.15□□□□□ -0.94
SF3A3-205ENST00000470585 SYNE4Q8N205 404 aa9.15□□□□□ -0.94
SF3A3-205ENST00000470585 ZC3H15Q8WU90 426 aaKnown RBP9.15□□□□□ -0.94
SF3A3-205ENST00000470585 ERVV-1B6SEH8 477 aa9.14□□□□□ -0.95
SF3A3-205ENST00000470585 HTATSF1O43719 755 aaKnown RBP9.14□□□□□ -0.95
SF3A3-205ENST00000470585 POLR3GLQ9BT43 218 aa9.14□□□□□ -0.95
SF3A3-205ENST00000470585 PGAP2Q9UHJ9 254 aa9.14□□□□□ -0.95
SF3A3-205ENST00000470585 NIP7Q9Y221 180 aaKnown RBP eCLIP9.14□□□□□ -0.95
SF3A3-205ENST00000470585 ZNF330Q9Y3S2 320 aaPredicted RBP9.14□□□□□ -0.95
SF3A3-205ENST00000470585 COL3A1P02461 1466 aaPredicted RBP9.14□□□□□ -0.95
SF3A3-205ENST00000470585 CCDC85CA6NKD9 419 aa9.13□□□□□ -0.95
SF3A3-205ENST00000470585 BTBD11A6QL63 1104 aa9.13□□□□□ -0.95
SF3A3-205ENST00000470585 HSPA5P11021 654 aaKnown RBP9.13□□□□□ -0.95
SF3A3-205ENST00000470585 SCNN1DP51172 638 aa9.13□□□□□ -0.95
SF3A3-205ENST00000470585 CRAMP1Q96RY5 1269 aa9.13□□□□□ -0.95
SF3A3-205ENST00000470585 ADARB2Q9NS39 739 aaKnown RBP9.13□□□□□ -0.95
SF3A3-205ENST00000470585 LTBP1Q14766 1721 aa9.13□□□□□ -0.95
SF3A3-205ENST00000470585 NOGQ13253 232 aa9.12□□□□□ -0.95
SF3A3-205ENST00000470585 CST9Q5W186 159 aa9.12□□□□□ -0.95
SF3A3-205ENST00000470585 SAPCD2Q86UD0 394 aa9.12□□□□□ -0.95
SF3A3-205ENST00000470585 CCDC24Q8N4L8 307 aa9.12□□□□□ -0.95
SF3A3-205ENST00000470585 SAGE1Q9NXZ1 904 aa9.12□□□□□ -0.95
SF3A3-205ENST00000470585 PER1O15534 1290 aaPredicted RBP9.11□□□□□ -0.95
SF3A3-205ENST00000470585 GTF2E1P29083 439 aaPredicted RBP9.11□□□□□ -0.95
SF3A3-205ENST00000470585 NIM1KQ8IY84 436 aa9.11□□□□□ -0.95
SF3A3-205ENST00000470585 LARGE2Q8N3Y3 721 aa9.11□□□□□ -0.95
SF3A3-205ENST00000470585 SUPT20HQ8NEM7 779 aa9.11□□□□□ -0.95
SF3A3-205ENST00000470585 MCOLN1Q9GZU1 580 aa9.11□□□□□ -0.95
SF3A3-205ENST00000470585 TMX4Q9H1E5 349 aaPredicted RBP9.11□□□□□ -0.95
SF3A3-205ENST00000470585 GPRC5DQ9NZD1 345 aa9.11□□□□□ -0.95
SF3A3-205ENST00000470585 USP16Q9Y5T5 823 aa9.11□□□□□ -0.95
SF3A3-205ENST00000470585 LAMB4A4D0S4 1761 aa9.1□□□□□ -0.95
SF3A3-205ENST00000470585 EPS15P42566 896 aa9.1□□□□□ -0.95
SF3A3-205ENST00000470585 CYP4F22Q6NT55 531 aa9.1□□□□□ -0.95
SF3A3-205ENST00000470585 RTF1Q92541 710 aaKnown RBP9.1□□□□□ -0.95
SF3A3-205ENST00000470585 RPGRQ92834 1020 aaKnown RBP9.1□□□□□ -0.95
SF3A3-205ENST00000470585 RBM17Q96I25 401 aaKnown RBP9.1□□□□□ -0.95
SF3A3-205ENST00000470585 RTFDC1Q9BY42 306 aaPredicted RBP9.1□□□□□ -0.95
SF3A3-205ENST00000470585 ERBB4Q15303 1308 aa9.09□□□□□ -0.95
SF3A3-205ENST00000470585 PAXIP1Q6ZW49 1069 aaPredicted RBP9.09□□□□□ -0.95
SF3A3-205ENST00000470585 CDC37L1Q7L3B6 337 aa9.09□□□□□ -0.95
SF3A3-205ENST00000470585 PNISRQ8TF01 805 aaKnown RBP9.09□□□□□ -0.95
SF3A3-205ENST00000470585 NUDCQ9Y266 331 aa9.09□□□□□ -0.95
SF3A3-205ENST00000470585 GJA3Q9Y6H8 435 aa9.09□□□□□ -0.95
SF3A3-205ENST00000470585 CASP8AP2Q9UKL3 1982 aa9.09□□□□□ -0.95
SF3A3-205ENST00000470585 MAP3K15Q6ZN16 1313 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 NUP98P52948 1817 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 TNRC18O15417 2968 aaPredicted RBP9.08□□□□□ -0.96
SF3A3-205ENST00000470585 COL4A5P29400 1685 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 NBPF26B4DH59 902 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 PRKAR2AP13861 404 aaKnown RBP9.08□□□□□ -0.96
SF3A3-205ENST00000470585 TRIM26Q12899 539 aaPredicted RBP9.08□□□□□ -0.96
SF3A3-205ENST00000470585 TNIP1Q15025 636 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 PARP10Q53GL7 1025 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 NBPF10Q6P3W6 841 aaKnown RBP9.08□□□□□ -0.96
SF3A3-205ENST00000470585 TMC4Q7Z404 712 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 NBPF15Q8N660 670 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 CFAP53Q96M91 514 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 RSPH6AQ9H0K4 717 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 ZNRF3Q9ULT6 936 aa9.08□□□□□ -0.96
SF3A3-205ENST00000470585 SPDYE2BA6NHP3 402 aa9.07□□□□□ -0.96
SF3A3-205ENST00000470585 PPEF1O14829 653 aaPredicted RBP9.07□□□□□ -0.96
SF3A3-205ENST00000470585 U2SURPO15042 1029 aaKnown RBP9.07□□□□□ -0.96
SF3A3-205ENST00000470585 CELF2O95319 508 aaKnown RBP9.07□□□□□ -0.96
SF3A3-205ENST00000470585 SPDYE6P0CI01 402 aa9.07□□□□□ -0.96
SF3A3-205ENST00000470585 SPDYE2Q495Y8 402 aa9.07□□□□□ -0.96
SF3A3-205ENST00000470585 PRPF38BQ5VTL8 546 aaKnown RBP9.07□□□□□ -0.96
SF3A3-205ENST00000470585 OLFM4Q6UX06 510 aa9.07□□□□□ -0.96
SF3A3-205ENST00000470585 PPP1R42Q7Z4L9 355 aa9.07□□□□□ -0.96
SF3A3-205ENST00000470585 ATP6V0A2Q9Y487 856 aa9.07□□□□□ -0.96
SF3A3-205ENST00000470585 ABCC12Q96J65 1359 aa9.07□□□□□ -0.96
SF3A3-205ENST00000470585 TRAF5O00463 557 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 ZBTB22O15209 634 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 PPIP5K2O43314 1243 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 KCNQ3O43525 872 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 BBOX1O75936 387 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 PRKAR2BP31323 418 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 KIAA2012Q0VF49 1180 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 DGKZQ13574 1117 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 TAF7Q15545 349 aaPredicted RBP9.06□□□□□ -0.96
SF3A3-205ENST00000470585 SLC10A5Q5PT55 438 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 KIF6Q6ZMV9 814 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 DPF2Q92785 391 aa9.06□□□□□ -0.96
SF3A3-205ENST00000470585 CCDC102AQ96A19 550 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms