RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 RAB34Q9BZG1 259 aa17.59■□□□□ 0.41
LIMS2-213ENST00000469300 CEP57L1Q8IYX8 460 aa17.59■□□□□ 0.41
LIMS2-213ENST00000469300 DDX11Q96FC9 970 aa17.59■□□□□ 0.41
LIMS2-213ENST00000469300 PLXNC1O60486 1568 aa17.59■□□□□ 0.41
LIMS2-213ENST00000469300 CABP5Q9NP86 173 aa17.59■□□□□ 0.41
LIMS2-213ENST00000469300 PTPRTO14522 1441 aa17.59■□□□□ 0.41
LIMS2-213ENST00000469300 TXLNBQ8N3L3 684 aa17.59■□□□□ 0.41
LIMS2-213ENST00000469300 SNRKQ9NRH2 765 aa17.59■□□□□ 0.41
LIMS2-213ENST00000469300 SYCP1Q15431 976 aa17.58■□□□□ 0.41
LIMS2-213ENST00000469300 NUP62CLQ9H1M0 184 aa17.58■□□□□ 0.41
LIMS2-213ENST00000469300 PLEKHG1Q9ULL1 1385 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 MYO1BO43795 1136 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 INSRP06213 1382 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 CBFA2T2O43439 604 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 IGHDP01880 384 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 PARP10Q53GL7 1025 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 NCOA7Q8NI08 942 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 EHMT1Q9H9B1 1298 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 GOLGA8AA7E2F4 631 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 GOLGA8BA8MQT2 603 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 TRAF1Q13077 416 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 TBC1D9Q6ZT07 1266 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 ZHX3Q9H4I2 956 aa17.58■□□□□ 0.4
LIMS2-213ENST00000469300 ZNF790Q6PG37 636 aa17.57■□□□□ 0.4
LIMS2-213ENST00000469300 CCDC96Q2M329 555 aa17.57■□□□□ 0.4
LIMS2-213ENST00000469300 MFSD6Q6ZSS7 791 aa17.57■□□□□ 0.4
LIMS2-213ENST00000469300 MNS1Q8NEH6 495 aa17.57■□□□□ 0.4
LIMS2-213ENST00000469300 TTC41PQ6P2S7 1318 aa17.57■□□□□ 0.4
LIMS2-213ENST00000469300 MCM4P33991 863 aa17.57■□□□□ 0.4
LIMS2-213ENST00000469300 RDXP35241 583 aaKnown RBP17.57■□□□□ 0.4
LIMS2-213ENST00000469300 CUL5Q93034 780 aa17.57■□□□□ 0.4
LIMS2-213ENST00000469300 SERPINC1P01008 464 aa17.56■□□□□ 0.4
LIMS2-213ENST00000469300 GCC2Q8IWJ2 1684 aa17.56■□□□□ 0.4
LIMS2-213ENST00000469300 EFCAB6Q5THR3 1501 aa17.56■□□□□ 0.4
LIMS2-213ENST00000469300 PDE1AP54750 535 aa17.56■□□□□ 0.4
LIMS2-213ENST00000469300 TMTC2Q8N394 836 aa17.56■□□□□ 0.4
LIMS2-213ENST00000469300 HDAC9Q9UKV0 1011 aa17.56■□□□□ 0.4
LIMS2-213ENST00000469300 KDM5DQ9BY66 1539 aa17.56■□□□□ 0.4
LIMS2-213ENST00000469300 SSRP1Q08945 709 aaKnown RBP17.56■□□□□ 0.4
LIMS2-213ENST00000469300 ANKRD2Q9GZV1 360 aa17.56■□□□□ 0.4
LIMS2-213ENST00000469300 NEK1Q96PY6 1258 aa17.56■□□□□ 0.4
LIMS2-213ENST00000469300 SSBP05455 408 aaKnown RBP eCLIP17.55■□□□□ 0.4
LIMS2-213ENST00000469300 ZNF804AQ7Z570 1209 aa17.55■□□□□ 0.4
LIMS2-213ENST00000469300 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
LIMS2-213ENST00000469300 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
LIMS2-213ENST00000469300 TFCP2L1Q9NZI6 479 aa17.55■□□□□ 0.4
LIMS2-213ENST00000469300 TSPY2A6NKD2 308 aa17.55■□□□□ 0.4
LIMS2-213ENST00000469300 SMTNL1A8MU46 457 aa17.55■□□□□ 0.4
LIMS2-213ENST00000469300 PPFIBP1Q86W92 1011 aa17.55■□□□□ 0.4
LIMS2-213ENST00000469300 CNNM2Q9H8M5 875 aa17.55■□□□□ 0.4
LIMS2-213ENST00000469300 PARP3Q9Y6F1 533 aa17.55■□□□□ 0.4
LIMS2-213ENST00000469300 SAMD9LQ8IVG5 1584 aa17.55■□□□□ 0.4
LIMS2-213ENST00000469300 KRT23Q9C075 422 aa17.54■□□□□ 0.4
LIMS2-213ENST00000469300 ARGLU1Q9NWB6 273 aaPredicted RBP17.54■□□□□ 0.4
LIMS2-213ENST00000469300 POLD1P28340 1107 aa17.54■□□□□ 0.4
LIMS2-213ENST00000469300 ANAPC15P60006 121 aa17.54■□□□□ 0.4
LIMS2-213ENST00000469300 TMEM67Q5HYA8 995 aa17.54■□□□□ 0.4
LIMS2-213ENST00000469300 PLBD2Q8NHP8 589 aa17.54■□□□□ 0.4
LIMS2-213ENST00000469300 DCTPP1Q9H773 170 aa17.54■□□□□ 0.4
LIMS2-213ENST00000469300 NLRP1Q9C000 1473 aa17.54■□□□□ 0.4
LIMS2-213ENST00000469300 CCDC194A0A1B0GVG4 234 aa17.54■□□□□ 0.4
LIMS2-213ENST00000469300 CHL1O00533 1208 aa17.54■□□□□ 0.4
LIMS2-213ENST00000469300 MCM5P33992 734 aa17.53■□□□□ 0.4
LIMS2-213ENST00000469300 JARID2Q92833 1246 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-213ENST00000469300 TSPYL6Q8N831 410 aa17.53■□□□□ 0.4
LIMS2-213ENST00000469300 PCDHB15Q9Y5E8 787 aa17.53■□□□□ 0.4
LIMS2-213ENST00000469300 PLCG2P16885 1265 aa17.53■□□□□ 0.4
LIMS2-213ENST00000469300 IARSP41252 1262 aaKnown RBP17.53■□□□□ 0.4
LIMS2-213ENST00000469300 TMEM266Q2M3C6 531 aa17.53■□□□□ 0.4
LIMS2-213ENST00000469300 TRAPPC3LQ5T215 181 aa17.53■□□□□ 0.4
LIMS2-213ENST00000469300 OGFOD1Q8N543 542 aa17.53■□□□□ 0.4
LIMS2-213ENST00000469300 EYA3Q99504 573 aa17.53■□□□□ 0.4
LIMS2-213ENST00000469300 ZC3H12CQ9C0D7 883 aaKnown RBP17.53■□□□□ 0.4
LIMS2-213ENST00000469300 CWC15Q9P013 229 aaKnown RBP17.53■□□□□ 0.4
LIMS2-213ENST00000469300 PIBF1Q8WXW3 757 aa17.53■□□□□ 0.4
LIMS2-213ENST00000469300 KAT14Q9H8E8 782 aa17.53■□□□□ 0.4
LIMS2-213ENST00000469300 ACBD3Q9H3P7 528 aa17.52■□□□□ 0.4
LIMS2-213ENST00000469300 CYP7A1P22680 504 aa17.52■□□□□ 0.4
LIMS2-213ENST00000469300 FEZ1Q99689 392 aa17.52■□□□□ 0.4
LIMS2-213ENST00000469300 GNAT2P19087 354 aa17.52■□□□□ 0.39
LIMS2-213ENST00000469300 BRPF1P55201 1214 aaPredicted RBP17.52■□□□□ 0.39
LIMS2-213ENST00000469300 MAP3K11Q16584 847 aa17.52■□□□□ 0.39
LIMS2-213ENST00000469300 MCMDC2Q4G0Z9 681 aa17.52■□□□□ 0.39
LIMS2-213ENST00000469300 SLC52A2Q9HAB3 445 aa17.52■□□□□ 0.39
LIMS2-213ENST00000469300 TNNQ9UQP3 1299 aa17.52■□□□□ 0.39
LIMS2-213ENST00000469300 NAA16Q6N069 864 aaPredicted RBP17.51■□□□□ 0.39
LIMS2-213ENST00000469300 USP16Q9Y5T5 823 aa17.51■□□□□ 0.39
LIMS2-213ENST00000469300 CDR1P51861 262 aa17.51■□□□□ 0.39
LIMS2-213ENST00000469300 CCDC191Q8NCU4 936 aa17.51■□□□□ 0.39
LIMS2-213ENST00000469300 ESR2Q92731 530 aa17.51■□□□□ 0.39
LIMS2-213ENST00000469300 SDSP20132 328 aa17.51■□□□□ 0.39
LIMS2-213ENST00000469300 NLRP5P59047 1200 aa17.51■□□□□ 0.39
LIMS2-213ENST00000469300 ZFYVE27Q5T4F4 411 aa17.51■□□□□ 0.39
LIMS2-213ENST00000469300 FERMT3Q86UX7 667 aa17.51■□□□□ 0.39
LIMS2-213ENST00000469300 GNAQP50148 359 aa17.51■□□□□ 0.39
LIMS2-213ENST00000469300 CEP85Q6P2H3 762 aa17.51■□□□□ 0.39
LIMS2-213ENST00000469300 PYM1Q9BRP8 204 aaKnown RBP17.5■□□□□ 0.39
LIMS2-213ENST00000469300 PDCL3Q9H2J4 239 aa17.5■□□□□ 0.39
LIMS2-213ENST00000469300 MYO6Q9UM54 1294 aa17.5■□□□□ 0.39
LIMS2-213ENST00000469300 SH3TC1Q8TE82 1336 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms