RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ZC3H4Q9UPT8 1303 aaKnown RBP22.15■■□□□ 1.14
SSBP1-207ENST00000468267 ELL2O00472 640 aaPredicted RBP22.15■■□□□ 1.14
SSBP1-207ENST00000468267 ALDH1B1P30837 517 aa22.15■■□□□ 1.14
SSBP1-207ENST00000468267 TCIRG1Q13488 830 aa22.15■■□□□ 1.14
SSBP1-207ENST00000468267 UTP14AQ9BVJ6 771 aaKnown RBP22.15■■□□□ 1.14
SSBP1-207ENST00000468267 DICER1Q9UPY3 1922 aaKnown RBP22.15■■□□□ 1.14
SSBP1-207ENST00000468267 KIF3CO14782 793 aa22.14■■□□□ 1.13
SSBP1-207ENST00000468267 ANKRD13DQ6ZTN6 518 aa22.14■■□□□ 1.13
SSBP1-207ENST00000468267 PLBD2Q8NHP8 589 aa22.14■■□□□ 1.13
SSBP1-207ENST00000468267 CEP350Q5VT06 3117 aa22.14■■□□□ 1.13
SSBP1-207ENST00000468267 LTBP3Q9NS15 1303 aa22.13■■□□□ 1.13
SSBP1-207ENST00000468267 SLC10A5Q5PT55 438 aa22.13■■□□□ 1.13
SSBP1-207ENST00000468267 NLRP10Q86W26 655 aa22.13■■□□□ 1.13
SSBP1-207ENST00000468267 IL16Q14005 1332 aa22.12■■□□□ 1.13
SSBP1-207ENST00000468267 HOXA10P31260 410 aaPredicted RBP22.12■■□□□ 1.13
SSBP1-207ENST00000468267 CHMP4AQ9BY43 222 aa22.12■■□□□ 1.13
SSBP1-207ENST00000468267 TAOK3Q9H2K8 898 aa22.12■■□□□ 1.13
SSBP1-207ENST00000468267 NMRK2Q9NPI5 230 aa22.12■■□□□ 1.13
SSBP1-207ENST00000468267 RNF123Q5XPI4 1314 aa22.11■■□□□ 1.13
SSBP1-207ENST00000468267 KDM2BQ8NHM5 1336 aa22.11■■□□□ 1.13
SSBP1-207ENST00000468267 RPGRQ92834 1020 aaKnown RBP22.11■■□□□ 1.13
SSBP1-207ENST00000468267 TSR2Q969E8 191 aaKnown RBP22.11■■□□□ 1.13
SSBP1-207ENST00000468267 CCDC93Q567U6 631 aa22.1■■□□□ 1.13
SSBP1-207ENST00000468267 C3orf67Q6ZVT6 689 aa22.1■■□□□ 1.13
SSBP1-207ENST00000468267 TSPYL6Q8N831 410 aa22.1■■□□□ 1.13
SSBP1-207ENST00000468267 TIAM2Q8IVF5 1701 aa22.09■■□□□ 1.13
SSBP1-207ENST00000468267 FAM9BQ8IZU0 186 aa22.09■■□□□ 1.13
SSBP1-207ENST00000468267 NLRP3Q96P20 1036 aa22.09■■□□□ 1.13
SSBP1-207ENST00000468267 CCDC30Q5VVM6 783 aa22.08■■□□□ 1.13
SSBP1-207ENST00000468267 OLFM4Q6UX06 510 aa22.08■■□□□ 1.13
SSBP1-207ENST00000468267 RTKN2Q8IZC4 609 aa22.08■■□□□ 1.13
SSBP1-207ENST00000468267 RBM17Q96I25 401 aaKnown RBP22.08■■□□□ 1.13
SSBP1-207ENST00000468267 CRAMP1Q96RY5 1269 aa22.08■■□□□ 1.13
SSBP1-207ENST00000468267 ISCA1Q9BUE6 129 aa22.08■■□□□ 1.13
SSBP1-207ENST00000468267 PHAXQ9H814 394 aaKnown RBP22.08■■□□□ 1.13
SSBP1-207ENST00000468267 TRMT112Q9UI30 125 aaKnown RBP22.08■■□□□ 1.13
SSBP1-207ENST00000468267 WDR63Q8IWG1 891 aa22.07■■□□□ 1.12
SSBP1-207ENST00000468267 SYNE4Q8N205 404 aa22.07■■□□□ 1.12
SSBP1-207ENST00000468267 SALL2Q9Y467 1007 aaPredicted RBP22.07■■□□□ 1.12
SSBP1-207ENST00000468267 GLTPD2A6NH11 291 aa22.06■■□□□ 1.12
SSBP1-207ENST00000468267 FKBP4Q02790 459 aaKnown RBP eCLIP22.06■■□□□ 1.12
SSBP1-207ENST00000468267 RRAGCQ9HB90 399 aa22.06■■□□□ 1.12
SSBP1-207ENST00000468267 LAMB2P55268 1798 aa22.06■■□□□ 1.12
SSBP1-207ENST00000468267 SH3TC1Q8TE82 1336 aa22.06■■□□□ 1.12
SSBP1-207ENST00000468267 ATP5J2-PTCD1G3V325 749 aa22.05■■□□□ 1.12
SSBP1-207ENST00000468267 TOMM70O94826 608 aa22.05■■□□□ 1.12
SSBP1-207ENST00000468267 HCLS1P14317 486 aaPredicted RBP22.05■■□□□ 1.12
SSBP1-207ENST00000468267 GOLGA2Q08379 1002 aa22.05■■□□□ 1.12
SSBP1-207ENST00000468267 TRIM28Q13263 835 aaKnown RBP22.05■■□□□ 1.12
SSBP1-207ENST00000468267 RIC3Q7Z5B4 369 aa22.05■■□□□ 1.12
SSBP1-207ENST00000468267 CC2D2BQ6DHV5 1058 aa22.04■■□□□ 1.12
SSBP1-207ENST00000468267 TWISTNBQ3B726 338 aaPredicted RBP22.03■■□□□ 1.12
SSBP1-207ENST00000468267 ZNF428Q96B54 188 aa22.03■■□□□ 1.12
SSBP1-207ENST00000468267 DPY19L2Q6NUT2 758 aa22.02■■□□□ 1.12
SSBP1-207ENST00000468267 ZNF277Q9NRM2 450 aaPredicted RBP22.02■■□□□ 1.12
SSBP1-207ENST00000468267 SNED1Q8TER0 1413 aa22.02■■□□□ 1.12
SSBP1-207ENST00000468267 FANCIQ9NVI1 1328 aa22.02■■□□□ 1.12
SSBP1-207ENST00000468267 PPEF1O14829 653 aaPredicted RBP22.01■■□□□ 1.11
SSBP1-207ENST00000468267 DDX58O95786 925 aaKnown RBP22.01■■□□□ 1.11
SSBP1-207ENST00000468267 GRIPAP1Q4V328 841 aa22.01■■□□□ 1.11
SSBP1-207ENST00000468267 C16orf71Q8IYS4 520 aaPredicted RBP22.01■■□□□ 1.11
SSBP1-207ENST00000468267 FAM89AQ96GI7 184 aa22.01■■□□□ 1.11
SSBP1-207ENST00000468267 PSMD1Q99460 953 aa22.01■■□□□ 1.11
SSBP1-207ENST00000468267 STK31Q9BXU1 1019 aa22.01■■□□□ 1.11
SSBP1-207ENST00000468267 CACNA1FO60840 1977 aa22.01■■□□□ 1.11
SSBP1-207ENST00000468267 DDX60Q8IY21 1712 aaKnown RBP22■■□□□ 1.11
SSBP1-207ENST00000468267 RBM46Q8TBY0 533 aaKnown RBP22■■□□□ 1.11
SSBP1-207ENST00000468267 ABCC4O15439 1325 aa22■■□□□ 1.11
SSBP1-207ENST00000468267 VEGFAP15692 232 aaPredicted RBP21.99■■□□□ 1.11
SSBP1-207ENST00000468267 MYD88Q99836 296 aa21.99■■□□□ 1.11
SSBP1-207ENST00000468267 TAF1P21675 1872 aa21.98■■□□□ 1.11
SSBP1-207ENST00000468267 WDR90Q96KV7 1748 aa21.98■■□□□ 1.11
SSBP1-207ENST00000468267 TCERG1O14776 1098 aaKnown RBP21.98■■□□□ 1.11
SSBP1-207ENST00000468267 BBOX1O75936 387 aa21.98■■□□□ 1.11
SSBP1-207ENST00000468267 HSPA6P17066 643 aa21.98■■□□□ 1.11
SSBP1-207ENST00000468267 IARSP41252 1262 aaKnown RBP21.98■■□□□ 1.11
SSBP1-207ENST00000468267 DDX46Q7L014 1031 aaKnown RBP21.98■■□□□ 1.11
SSBP1-207ENST00000468267 METTL22Q9BUU2 404 aaPredicted RBP21.98■■□□□ 1.11
SSBP1-207ENST00000468267 ATP6V0A2Q9Y487 856 aa21.98■■□□□ 1.11
SSBP1-207ENST00000468267 SLC4A2P04920 1241 aa21.97■■□□□ 1.11
SSBP1-207ENST00000468267 KSR2Q6VAB6 950 aa21.97■■□□□ 1.11
SSBP1-207ENST00000468267 SLC51AQ86UW1 340 aa21.97■■□□□ 1.11
SSBP1-207ENST00000468267 CCDC191Q8NCU4 936 aa21.97■■□□□ 1.11
SSBP1-207ENST00000468267 SPINK5Q9NQ38 1064 aaPredicted RBP21.97■■□□□ 1.11
SSBP1-207ENST00000468267 POTECB2RU33 542 aa21.96■■□□□ 1.11
SSBP1-207ENST00000468267 VAMP4O75379 141 aa21.96■■□□□ 1.11
SSBP1-207ENST00000468267 EXOSC9Q06265 439 aaKnown RBP21.96■■□□□ 1.11
SSBP1-207ENST00000468267 SF3B3Q15393 1217 aaKnown RBP21.96■■□□□ 1.11
SSBP1-207ENST00000468267 RTL5Q5HYW3 569 aaPredicted RBP21.96■■□□□ 1.11
SSBP1-207ENST00000468267 ZBTB38Q8NAP3 1195 aaPredicted RBP21.96■■□□□ 1.11
SSBP1-207ENST00000468267 TMX4Q9H1E5 349 aaPredicted RBP21.96■■□□□ 1.11
SSBP1-207ENST00000468267 MAP3K2Q9Y2U5 619 aa21.96■■□□□ 1.11
SSBP1-207ENST00000468267 PI4KAP2A4QPH2 592 aa21.95■■□□□ 1.1
SSBP1-207ENST00000468267 IRS4O14654 1257 aaPredicted RBP21.95■■□□□ 1.1
SSBP1-207ENST00000468267 DDNO94850 711 aaPredicted RBP21.95■■□□□ 1.1
SSBP1-207ENST00000468267 GRAPQ13588 217 aa21.95■■□□□ 1.1
SSBP1-207ENST00000468267 G2E3Q7L622 706 aa21.95■■□□□ 1.1
SSBP1-207ENST00000468267 PI4KAP1Q8N8J0 262 aa21.95■■□□□ 1.1
SSBP1-207ENST00000468267 GRAPLQ8TC17 118 aaPredicted RBP21.95■■□□□ 1.1
SSBP1-207ENST00000468267 SP8Q8IXZ3 490 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms