RNA–Protein interactions for RNA: ENST00000467728.5

NR1H3-217, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-217ENST00000467728 CYP46A1Q9Y6A2 500 aa15.24■□□□□ 0.03
NR1H3-217ENST00000467728 FAM193AP78312 1265 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 IRX3P78415 501 aaPredicted RBP15.23■□□□□ 0.03
NR1H3-217ENST00000467728 FBXW7Q969H0 707 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 NPHP3Q7Z494 1330 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 KRBA2Q6ZNG9 492 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 ZSCAN31Q96LW9 406 aaPredicted RBP15.23■□□□□ 0.03
NR1H3-217ENST00000467728 SCAND2PQ9GZW5 306 aaPredicted RBP15.23■□□□□ 0.03
NR1H3-217ENST00000467728 TMX1Q9H3N1 280 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 SH2B1Q9NRF2 756 aaPredicted RBP15.23■□□□□ 0.03
NR1H3-217ENST00000467728 RSPH14Q9UHP6 348 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 HTATSF1O43719 755 aaKnown RBP15.23■□□□□ 0.03
NR1H3-217ENST00000467728 NEMFO60524 1076 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 SURF6O75683 361 aaKnown RBP15.23■□□□□ 0.03
NR1H3-217ENST00000467728 SNW1Q13573 536 aaKnown RBP15.23■□□□□ 0.03
NR1H3-217ENST00000467728 IDI1Q13907 227 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 LARP1Q6PKG0 1096 aaKnown RBP15.23■□□□□ 0.03
NR1H3-217ENST00000467728 CREBRFQ8IUR6 639 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 MRFAP1L1Q96HT8 127 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 TSPYL1Q9H0U9 437 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
NR1H3-217ENST00000467728 TRIM66O15016 1216 aa15.22■□□□□ 0.03
NR1H3-217ENST00000467728 GNAI3P08754 354 aa15.22■□□□□ 0.03
NR1H3-217ENST00000467728 SEC31AO94979 1220 aaKnown RBP15.22■□□□□ 0.03
NR1H3-217ENST00000467728 CEBPZQ03701 1054 aaKnown RBP15.22■□□□□ 0.03
NR1H3-217ENST00000467728 SMARCE1Q969G3 411 aa15.22■□□□□ 0.03
NR1H3-217ENST00000467728 ZSWIM6Q9HCJ5 1215 aa15.22■□□□□ 0.03
NR1H3-217ENST00000467728 LCMT1Q9UIC8 334 aa15.22■□□□□ 0.03
NR1H3-217ENST00000467728 CDK12Q9NYV4 1490 aaPredicted RBP15.22■□□□□ 0.03
NR1H3-217ENST00000467728 BECN2A8MW95 431 aa15.21■□□□□ 0.03
NR1H3-217ENST00000467728 CNTROBQ8N137 903 aa15.21■□□□□ 0.03
NR1H3-217ENST00000467728 ERCC4Q92889 916 aaPredicted RBP15.21■□□□□ 0.03
NR1H3-217ENST00000467728 L2HGDHQ9H9P8 463 aa15.21■□□□□ 0.03
NR1H3-217ENST00000467728 STK3Q13188 491 aa15.21■□□□□ 0.02
NR1H3-217ENST00000467728 E4F1Q66K89 784 aaPredicted RBP15.21■□□□□ 0.02
NR1H3-217ENST00000467728 SARM1Q6SZW1 724 aa15.21■□□□□ 0.02
NR1H3-217ENST00000467728 AEBP2Q6ZN18 517 aaPredicted RBP15.21■□□□□ 0.02
NR1H3-217ENST00000467728 C10orf67Q8IYJ2 551 aa15.21■□□□□ 0.02
NR1H3-217ENST00000467728 DDX11Q96FC9 970 aa15.21■□□□□ 0.02
NR1H3-217ENST00000467728 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
NR1H3-217ENST00000467728 PTPRMP28827 1452 aa15.2■□□□□ 0.02
NR1H3-217ENST00000467728 FOXO3O43524 673 aa15.2■□□□□ 0.02
NR1H3-217ENST00000467728 CCDC93Q567U6 631 aa15.2■□□□□ 0.02
NR1H3-217ENST00000467728 TEX35Q5T0J7 233 aa15.2■□□□□ 0.02
NR1H3-217ENST00000467728 WAPLQ7Z5K2 1190 aa15.2■□□□□ 0.02
NR1H3-217ENST00000467728 EPC1Q9H2F5 836 aa15.2■□□□□ 0.02
NR1H3-217ENST00000467728 TSPYL4Q9UJ04 414 aa15.2■□□□□ 0.02
NR1H3-217ENST00000467728 KIF20BQ96Q89 1820 aa15.2■□□□□ 0.02
NR1H3-217ENST00000467728 AOX1Q06278 1338 aa15.2■□□□□ 0.02
NR1H3-217ENST00000467728 ZRANB2O95218 330 aaKnown RBP eCLIP15.19■□□□□ 0.02
NR1H3-217ENST00000467728 TMCO3Q6UWJ1 677 aa15.19■□□□□ 0.02
NR1H3-217ENST00000467728 RHPN1Q8TCX5 695 aa15.19■□□□□ 0.02
NR1H3-217ENST00000467728 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.02
NR1H3-217ENST00000467728 TTC21BQ7Z4L5 1316 aa15.19■□□□□ 0.02
NR1H3-217ENST00000467728 RAB11FIP3O75154 756 aa15.19■□□□□ 0.02
NR1H3-217ENST00000467728 GYS2P54840 703 aa15.19■□□□□ 0.02
NR1H3-217ENST00000467728 FLIIQ13045 1269 aa15.19■□□□□ 0.02
NR1H3-217ENST00000467728 PPP1R13BQ96KQ4 1090 aa15.19■□□□□ 0.02
NR1H3-217ENST00000467728 SOS1Q07889 1333 aaPredicted RBP15.19■□□□□ 0.02
NR1H3-217ENST00000467728 IFIT2P09913 472 aaKnown RBP15.18■□□□□ 0.02
NR1H3-217ENST00000467728 PPP1R42Q7Z4L9 355 aa15.18■□□□□ 0.02
NR1H3-217ENST00000467728 USP44Q9H0E7 712 aa15.18■□□□□ 0.02
NR1H3-217ENST00000467728 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
NR1H3-217ENST00000467728 SIGLEC1Q9BZZ2 1709 aa15.18■□□□□ 0.02
NR1H3-217ENST00000467728 DHX40Q8IX18 779 aaKnown RBP15.18■□□□□ 0.02
NR1H3-217ENST00000467728 CHMP4CQ96CF2 233 aa15.18■□□□□ 0.02
NR1H3-217ENST00000467728 STK31Q9BXU1 1019 aa15.18■□□□□ 0.02
NR1H3-217ENST00000467728 RASSF4Q9H2L5 321 aa15.18■□□□□ 0.02
NR1H3-217ENST00000467728 AATKQ6ZMQ8 1374 aa15.17■□□□□ 0.02
NR1H3-217ENST00000467728 PDCP20941 246 aa15.17■□□□□ 0.02
NR1H3-217ENST00000467728 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
NR1H3-217ENST00000467728 TXLNBQ8N3L3 684 aa15.17■□□□□ 0.02
NR1H3-217ENST00000467728 UBXN4Q92575 508 aa15.17■□□□□ 0.02
NR1H3-217ENST00000467728 COG3Q96JB2 828 aa15.17■□□□□ 0.02
NR1H3-217ENST00000467728 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
NR1H3-217ENST00000467728 NEXMIFQ5QGS0 1516 aa15.17■□□□□ 0.02
NR1H3-217ENST00000467728 MYO1CO00159 1063 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 SASH3O75995 380 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 UBTFL1P0CB47 393 aaPredicted RBP15.16■□□□□ 0.02
NR1H3-217ENST00000467728 TPM4P67936 248 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 ZSCAN26Q16670 478 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 NBPF11Q86T75 865 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 CCDC34Q96HJ3 373 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 ORC3Q9UBD5 711 aaPredicted RBP15.16■□□□□ 0.02
NR1H3-217ENST00000467728 KIF2AO00139 706 aaPredicted RBP15.16■□□□□ 0.02
NR1H3-217ENST00000467728 HOMER1Q86YM7 354 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 AOPEPQ8N6M6 819 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 NECTIN1Q15223 517 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 STX1AQ16623 288 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 SSH3Q8TE77 659 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 TM6SF1Q9BZW5 370 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 FTOQ9C0B1 505 aaKnown RBP eCLIP15.16■□□□□ 0.02
NR1H3-217ENST00000467728 DNAI1Q9UI46 699 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 TAF6LQ9Y6J9 622 aa15.16■□□□□ 0.02
NR1H3-217ENST00000467728 JAK2O60674 1132 aa15.15■□□□□ 0.02
NR1H3-217ENST00000467728 CAVIN2O95810 425 aa15.15■□□□□ 0.02
NR1H3-217ENST00000467728 ZKSCAN1P17029 563 aaPredicted RBP15.15■□□□□ 0.02
NR1H3-217ENST00000467728 OAS2P29728 719 aaKnown RBP15.15■□□□□ 0.02
NR1H3-217ENST00000467728 MUM1L1Q5H9M0 696 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms