RNA–Protein interactions for RNA: ENST00000466124.1

PRKCB-204, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-204ENST00000466124 TIE1P35590 1138 aa7.53□□□□□ -1.2
PRKCB-204ENST00000466124 TNNT2P45379 298 aaPredicted RBP7.53□□□□□ -1.2
PRKCB-204ENST00000466124 FKBP4Q02790 459 aaKnown RBP eCLIP7.53□□□□□ -1.2
PRKCB-204ENST00000466124 CCDC93Q567U6 631 aa7.53□□□□□ -1.2
PRKCB-204ENST00000466124 MAP1SQ66K74 1059 aaPredicted RBP7.53□□□□□ -1.2
PRKCB-204ENST00000466124 MASTLQ96GX5 879 aa7.53□□□□□ -1.2
PRKCB-204ENST00000466124 LGR6Q9HBX8 967 aa7.53□□□□□ -1.2
PRKCB-204ENST00000466124 DDX21Q9NR30 783 aaKnown RBP eCLIP7.53□□□□□ -1.2
PRKCB-204ENST00000466124 ABT1Q9ULW3 272 aaKnown RBP7.53□□□□□ -1.2
PRKCB-204ENST00000466124 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
PRKCB-204ENST00000466124 RNF123Q5XPI4 1314 aa7.52□□□□□ -1.2
PRKCB-204ENST00000466124 GABBR2O75899 941 aa7.52□□□□□ -1.21
PRKCB-204ENST00000466124 CANXP27824 592 aaKnown RBP7.52□□□□□ -1.21
PRKCB-204ENST00000466124 ECE1P42892 770 aa7.52□□□□□ -1.21
PRKCB-204ENST00000466124 SULT6B1Q6IMI4 303 aa7.52□□□□□ -1.21
PRKCB-204ENST00000466124 CCDC24Q8N4L8 307 aa7.52□□□□□ -1.21
PRKCB-204ENST00000466124 CNBD1Q8NA66 436 aa7.52□□□□□ -1.21
PRKCB-204ENST00000466124 FBXO22Q8NEZ5 403 aa7.52□□□□□ -1.21
PRKCB-204ENST00000466124 CAPNS2Q96L46 248 aa7.52□□□□□ -1.21
PRKCB-204ENST00000466124 GPR101Q96P66 508 aaPredicted RBP7.52□□□□□ -1.21
PRKCB-204ENST00000466124 BEGAINQ9BUH8 593 aa7.52□□□□□ -1.21
PRKCB-204ENST00000466124 MCOLN1Q9GZU1 580 aa7.52□□□□□ -1.21
PRKCB-204ENST00000466124 FZD9O00144 591 aa7.51□□□□□ -1.21
PRKCB-204ENST00000466124 STARD3NLO95772 234 aa7.51□□□□□ -1.21
PRKCB-204ENST00000466124 IL13P35225 146 aa7.51□□□□□ -1.21
PRKCB-204ENST00000466124 MAP2K2P36507 400 aa7.51□□□□□ -1.21
PRKCB-204ENST00000466124 IL6STP40189 918 aaPredicted RBP7.51□□□□□ -1.21
PRKCB-204ENST00000466124 ST5P78524 1137 aa7.51□□□□□ -1.21
PRKCB-204ENST00000466124 CYP4F22Q6NT55 531 aa7.51□□□□□ -1.21
PRKCB-204ENST00000466124 GPC2Q8N158 579 aa7.51□□□□□ -1.21
PRKCB-204ENST00000466124 ZNF277Q9NRM2 450 aaPredicted RBP7.51□□□□□ -1.21
PRKCB-204ENST00000466124 SNED1Q8TER0 1413 aa7.51□□□□□ -1.21
PRKCB-204ENST00000466124 BCORQ6W2J9 1755 aa7.51□□□□□ -1.21
PRKCB-204ENST00000466124 TRPM7Q96QT4 1865 aa7.5□□□□□ -1.21
PRKCB-204ENST00000466124 KLRG2A4D1S0 409 aaPredicted RBP7.5□□□□□ -1.21
PRKCB-204ENST00000466124 CA12O43570 354 aa7.5□□□□□ -1.21
PRKCB-204ENST00000466124 PPP1R37O75864 691 aa7.5□□□□□ -1.21
PRKCB-204ENST00000466124 CAMTA2O94983 1202 aa7.5□□□□□ -1.21
PRKCB-204ENST00000466124 GOLGA2Q08379 1002 aa7.5□□□□□ -1.21
PRKCB-204ENST00000466124 SETDB2Q96T68 719 aa7.5□□□□□ -1.21
PRKCB-204ENST00000466124 RYDENQ9NUL5 291 aaKnown RBP7.5□□□□□ -1.21
PRKCB-204ENST00000466124 TBC1D2BQ9UPU7 963 aa7.5□□□□□ -1.21
PRKCB-204ENST00000466124 TLL2Q9Y6L7 1015 aa7.5□□□□□ -1.21
PRKCB-204ENST00000466124 HEG1Q9ULI3 1381 aa7.49□□□□□ -1.21
PRKCB-204ENST00000466124 AOC2O75106 756 aa7.49□□□□□ -1.21
PRKCB-204ENST00000466124 NPR1P16066 1061 aa7.49□□□□□ -1.21
PRKCB-204ENST00000466124 IARSP41252 1262 aaKnown RBP7.49□□□□□ -1.21
PRKCB-204ENST00000466124 ATN1P54259 1190 aaPredicted RBP7.49□□□□□ -1.21
PRKCB-204ENST00000466124 FMR1Q06787 632 aaKnown RBP eCLIP7.49□□□□□ -1.212e-6■■□□□ 11.8
PRKCB-204ENST00000466124 CST9Q5W186 159 aa7.49□□□□□ -1.21
PRKCB-204ENST00000466124 RTKN2Q8IZC4 609 aa7.49□□□□□ -1.21
PRKCB-204ENST00000466124 MS4A4AQ96JQ5 239 aa7.49□□□□□ -1.21
PRKCB-204ENST00000466124 TEX13AQ9BXU3 409 aaPredicted RBP7.49□□□□□ -1.21
PRKCB-204ENST00000466124 TSKSQ9UJT2 592 aa7.49□□□□□ -1.21
PRKCB-204ENST00000466124 TRIM35Q9UPQ4 493 aa7.49□□□□□ -1.21
PRKCB-204ENST00000466124 CASP8AP2Q9UKL3 1982 aa7.49□□□□□ -1.21
PRKCB-204ENST00000466124 NPHP1O15259 732 aa7.48□□□□□ -1.21
PRKCB-204ENST00000466124 SCNN1DP51172 638 aa7.48□□□□□ -1.21
PRKCB-204ENST00000466124 CLCN6P51797 869 aa7.48□□□□□ -1.21
PRKCB-204ENST00000466124 BRPF1P55201 1214 aaPredicted RBP7.48□□□□□ -1.21
PRKCB-204ENST00000466124 MKRN3Q13064 507 aaKnown RBP7.48□□□□□ -1.21
PRKCB-204ENST00000466124 OLFM4Q6UX06 510 aa7.48□□□□□ -1.21
PRKCB-204ENST00000466124 TTC5Q8N0Z6 440 aa7.48□□□□□ -1.21
PRKCB-204ENST00000466124 ZNF496Q96IT1 587 aaPredicted RBP7.48□□□□□ -1.21
PRKCB-204ENST00000466124 HHIPL1Q96JK4 782 aa7.48□□□□□ -1.21
PRKCB-204ENST00000466124 PSMD1Q99460 953 aa7.48□□□□□ -1.21
PRKCB-204ENST00000466124 COL4A5P29400 1685 aa7.47□□□□□ -1.21
PRKCB-204ENST00000466124 TRAF5O00463 557 aa7.47□□□□□ -1.21
PRKCB-204ENST00000466124 ATMINO43313 823 aaPredicted RBP7.47□□□□□ -1.21
PRKCB-204ENST00000466124 LMOD1P29536 600 aaPredicted RBP7.47□□□□□ -1.21
PRKCB-204ENST00000466124 GRM1Q13255 1194 aa7.47□□□□□ -1.21
PRKCB-204ENST00000466124 DGKZQ13574 1117 aa7.47□□□□□ -1.21
PRKCB-204ENST00000466124 MTHFSDQ2M296 383 aaKnown RBP7.47□□□□□ -1.21
PRKCB-204ENST00000466124 PRPF38BQ5VTL8 546 aaKnown RBP7.47□□□□□ -1.21
PRKCB-204ENST00000466124 CLEC4GQ6UXB4 293 aa7.47□□□□□ -1.21
PRKCB-204ENST00000466124 USP50Q70EL3 339 aaPredicted RBP7.47□□□□□ -1.21
PRKCB-204ENST00000466124 SAPCD2Q86UD0 394 aa7.47□□□□□ -1.21
PRKCB-204ENST00000466124 NBPF5PQ86XG9 351 aaPredicted RBP7.47□□□□□ -1.21
PRKCB-204ENST00000466124 SYNE4Q8N205 404 aa7.47□□□□□ -1.21
PRKCB-204ENST00000466124 JDP2Q8WYK2 163 aa7.47□□□□□ -1.21
PRKCB-204ENST00000466124 ZNF330Q9Y3S2 320 aaPredicted RBP7.47□□□□□ -1.21
PRKCB-204ENST00000466124 SIPA1L3O60292 1781 aaPredicted RBP7.46□□□□□ -1.21
PRKCB-204ENST00000466124 ALDH1B1P30837 517 aa7.46□□□□□ -1.22
PRKCB-204ENST00000466124 EPS15P42566 896 aa7.46□□□□□ -1.22
PRKCB-204ENST00000466124 EIF6P56537 245 aaKnown RBP7.46□□□□□ -1.22
PRKCB-204ENST00000466124 ZNF790Q6PG37 636 aa7.46□□□□□ -1.22
PRKCB-204ENST00000466124 DZIP3Q86Y13 1208 aaKnown RBP7.46□□□□□ -1.22
PRKCB-204ENST00000466124 A1BGP04217 495 aa7.45□□□□□ -1.22
PRKCB-204ENST00000466124 HMOX1P09601 288 aa7.45□□□□□ -1.22
PRKCB-204ENST00000466124 CC2D2BQ6DHV5 1058 aa7.45□□□□□ -1.22
PRKCB-204ENST00000466124 ASTLQ6HA08 431 aaPredicted RBP7.45□□□□□ -1.22
PRKCB-204ENST00000466124 NPM2Q86SE8 214 aaKnown RBP7.45□□□□□ -1.22
PRKCB-204ENST00000466124 MORC1Q86VD1 984 aa7.45□□□□□ -1.22
PRKCB-204ENST00000466124 PANK3Q9H999 370 aa7.45□□□□□ -1.22
PRKCB-204ENST00000466124 GJA3Q9Y6H8 435 aa7.45□□□□□ -1.22
PRKCB-204ENST00000466124 CELF2O95319 508 aaKnown RBP7.44□□□□□ -1.22
PRKCB-204ENST00000466124 NOGQ13253 232 aa7.44□□□□□ -1.22
PRKCB-204ENST00000466124 CRY2Q49AN0 593 aa7.44□□□□□ -1.22
PRKCB-204ENST00000466124 GRIPAP1Q4V328 841 aa7.44□□□□□ -1.22
PRKCB-204ENST00000466124 CIAPIN1Q6FI81 312 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms