RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 PNMA8AQ86V59 439 aaPredicted RBP15.72■□□□□ 0.11
CNOT4-208ENST00000465721 SYNE4Q8N205 404 aa15.72■□□□□ 0.11
CNOT4-208ENST00000465721 HTATSF1O43719 755 aaKnown RBP15.71■□□□□ 0.11
CNOT4-208ENST00000465721 SLC51AQ86UW1 340 aa15.71■□□□□ 0.11
CNOT4-208ENST00000465721 CNTROBQ8N137 903 aa15.71■□□□□ 0.11
CNOT4-208ENST00000465721 CLEC11AQ9Y240 323 aa15.71■□□□□ 0.11
CNOT4-208ENST00000465721 NUDCQ9Y266 331 aa15.71■□□□□ 0.11
CNOT4-208ENST00000465721 PPP2R1AP30153 589 aa15.7■□□□□ 0.1
CNOT4-208ENST00000465721 LBX1P52954 281 aa15.7■□□□□ 0.1
CNOT4-208ENST00000465721 NUTM1Q86Y26 1132 aa15.7■□□□□ 0.1
CNOT4-208ENST00000465721 UBN2Q6ZU65 1347 aa15.69■□□□□ 0.1
CNOT4-208ENST00000465721 TAF1P21675 1872 aa15.69■□□□□ 0.1
CNOT4-208ENST00000465721 HSPA8P11142 646 aaKnown RBP15.69■□□□□ 0.1
CNOT4-208ENST00000465721 TAF7Q15545 349 aaPredicted RBP15.69■□□□□ 0.1
CNOT4-208ENST00000465721 NYXQ9GZU5 481 aa15.69■□□□□ 0.1
CNOT4-208ENST00000465721 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
CNOT4-208ENST00000465721 ERVV-1B6SEH8 477 aa15.68■□□□□ 0.1
CNOT4-208ENST00000465721 HOXA10P31260 410 aaPredicted RBP15.68■□□□□ 0.1
CNOT4-208ENST00000465721 SCNN1DP51172 638 aa15.68■□□□□ 0.1
CNOT4-208ENST00000465721 DEFB115Q30KQ5 88 aa15.68■□□□□ 0.1
CNOT4-208ENST00000465721 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
CNOT4-208ENST00000465721 MIS18AQ9NYP9 233 aa15.68■□□□□ 0.1
CNOT4-208ENST00000465721 WDR33Q9C0J8 1336 aaKnown RBP15.68■□□□□ 0.1
CNOT4-208ENST00000465721 GTF2E1P29083 439 aaPredicted RBP15.67■□□□□ 0.1
CNOT4-208ENST00000465721 CC2D2BQ6DHV5 1058 aa15.67■□□□□ 0.1
CNOT4-208ENST00000465721 TTLL7Q6ZT98 887 aa15.67■□□□□ 0.1
CNOT4-208ENST00000465721 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
CNOT4-208ENST00000465721 DDX21Q9NR30 783 aaKnown RBP eCLIP15.67■□□□□ 0.1
CNOT4-208ENST00000465721 CASP8AP2Q9UKL3 1982 aa15.67■□□□□ 0.1
CNOT4-208ENST00000465721 LRRC37AA6NMS7 1700 aa15.66■□□□□ 0.1
CNOT4-208ENST00000465721 EIF6P56537 245 aaKnown RBP15.66■□□□□ 0.1
CNOT4-208ENST00000465721 FMR1Q06787 632 aaKnown RBP eCLIP15.66■□□□□ 0.1
CNOT4-208ENST00000465721 ABT1Q9ULW3 272 aaKnown RBP15.66■□□□□ 0.1
CNOT4-208ENST00000465721 GJA3Q9Y6H8 435 aa15.66■□□□□ 0.1
CNOT4-208ENST00000465721 NTSR2O95665 410 aa15.65■□□□□ 0.1
CNOT4-208ENST00000465721 GPTP24298 496 aa15.65■□□□□ 0.1
CNOT4-208ENST00000465721 MAP2K1Q02750 393 aaPredicted RBP15.65■□□□□ 0.1
CNOT4-208ENST00000465721 NGEFQ8N5V2 710 aa15.65■□□□□ 0.1
CNOT4-208ENST00000465721 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
CNOT4-208ENST00000465721 POLR2AP24928 1970 aaKnown RBP15.65■□□□□ 0.1
CNOT4-208ENST00000465721 LMOD1P29536 600 aaPredicted RBP15.64■□□□□ 0.09
CNOT4-208ENST00000465721 EPS15P42566 896 aa15.64■□□□□ 0.09
CNOT4-208ENST00000465721 EIF4A1P60842 406 aaKnown RBP15.64■□□□□ 0.09
CNOT4-208ENST00000465721 SUSD4Q5VX71 490 aa15.64■□□□□ 0.09
CNOT4-208ENST00000465721 KIF6Q6ZMV9 814 aa15.64■□□□□ 0.09
CNOT4-208ENST00000465721 C3orf67Q6ZVT6 689 aa15.64■□□□□ 0.09
CNOT4-208ENST00000465721 DDX60Q8IY21 1712 aaKnown RBP15.64■□□□□ 0.09
CNOT4-208ENST00000465721 LARGE2Q8N3Y3 721 aa15.64■□□□□ 0.09
CNOT4-208ENST00000465721 CRAMP1Q96RY5 1269 aa15.64■□□□□ 0.09
CNOT4-208ENST00000465721 ZBTB3Q9H5J0 574 aa15.64■□□□□ 0.09
CNOT4-208ENST00000465721 DUOX1Q9NRD9 1551 aa15.63■□□□□ 0.09
CNOT4-208ENST00000465721 PPEF1O14829 653 aaPredicted RBP15.63■□□□□ 0.09
CNOT4-208ENST00000465721 TNRC18O15417 2968 aaPredicted RBP15.63■□□□□ 0.09
CNOT4-208ENST00000465721 GRIPAP1Q4V328 841 aa15.63■□□□□ 0.09
CNOT4-208ENST00000465721 ZNF34Q8IZ26 560 aa15.63■□□□□ 0.09
CNOT4-208ENST00000465721 PNISRQ8TF01 805 aaKnown RBP15.63■□□□□ 0.09
CNOT4-208ENST00000465721 ABHD8Q96I13 439 aa15.63■□□□□ 0.09
CNOT4-208ENST00000465721 PDE4DIPQ5VU43 2346 aa15.62■□□□□ 0.09
CNOT4-208ENST00000465721 TRAF5O00463 557 aa15.62■□□□□ 0.09
CNOT4-208ENST00000465721 MYL6BP14649 208 aa15.62■□□□□ 0.09
CNOT4-208ENST00000465721 USP50Q70EL3 339 aaPredicted RBP15.62■□□□□ 0.09
CNOT4-208ENST00000465721 CAPNS2Q96L46 248 aa15.62■□□□□ 0.09
CNOT4-208ENST00000465721 RRP7AQ9Y3A4 280 aaKnown RBP15.62■□□□□ 0.09
CNOT4-208ENST00000465721 CST9Q5W186 159 aa15.61■□□□□ 0.09
CNOT4-208ENST00000465721 CYP4F22Q6NT55 531 aa15.61■□□□□ 0.09
CNOT4-208ENST00000465721 GIGYF2Q6Y7W6 1299 aaKnown RBP15.61■□□□□ 0.09
CNOT4-208ENST00000465721 LRP10Q7Z4F1 713 aa15.61■□□□□ 0.09
CNOT4-208ENST00000465721 NIM1KQ8IY84 436 aa15.61■□□□□ 0.09
CNOT4-208ENST00000465721 RBM17Q96I25 401 aaKnown RBP15.61■□□□□ 0.09
CNOT4-208ENST00000465721 THUMPD2Q9BTF0 503 aaKnown RBP15.61■□□□□ 0.09
CNOT4-208ENST00000465721 ERBB4Q15303 1308 aa15.61■□□□□ 0.09
CNOT4-208ENST00000465721 AOC3Q16853 763 aa15.6■□□□□ 0.09
CNOT4-208ENST00000465721 PLEKHF1Q96S99 279 aa15.6■□□□□ 0.09
CNOT4-208ENST00000465721 TLL2Q9Y6L7 1015 aa15.6■□□□□ 0.09
CNOT4-208ENST00000465721 TCERG1O14776 1098 aaKnown RBP15.59■□□□□ 0.09
CNOT4-208ENST00000465721 PPIP5K2O43314 1243 aa15.59■□□□□ 0.09
CNOT4-208ENST00000465721 ECE1P42892 770 aa15.59■□□□□ 0.09
CNOT4-208ENST00000465721 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
CNOT4-208ENST00000465721 GPRC5DQ9NZD1 345 aa15.59■□□□□ 0.09
CNOT4-208ENST00000465721 ABCC4O15439 1325 aa15.59■□□□□ 0.09
CNOT4-208ENST00000465721 NFE2L2Q16236 605 aa15.58■□□□□ 0.08
CNOT4-208ENST00000465721 FAM161AQ3B820 660 aa15.58■□□□□ 0.08
CNOT4-208ENST00000465721 PARP10Q53GL7 1025 aa15.58■□□□□ 0.08
CNOT4-208ENST00000465721 PAXIP1Q6ZW49 1069 aaPredicted RBP15.58■□□□□ 0.08
CNOT4-208ENST00000465721 RTFDC1Q9BY42 306 aaPredicted RBP15.58■□□□□ 0.08
CNOT4-208ENST00000465721 ADARB2Q9NS39 739 aaKnown RBP15.58■□□□□ 0.08
CNOT4-208ENST00000465721 ATP6V0A2Q9Y487 856 aa15.58■□□□□ 0.08
CNOT4-208ENST00000465721 GRM1Q13255 1194 aa15.57■□□□□ 0.08
CNOT4-208ENST00000465721 PDIA6Q15084 440 aa15.57■□□□□ 0.08
CNOT4-208ENST00000465721 PPP1R42Q7Z4L9 355 aa15.57■□□□□ 0.08
CNOT4-208ENST00000465721 GPR101Q96P66 508 aaPredicted RBP15.57■□□□□ 0.08
CNOT4-208ENST00000465721 VPS33BQ9H267 617 aa15.57■□□□□ 0.08
CNOT4-208ENST00000465721 AKAP11Q9UKA4 1901 aa15.56■□□□□ 0.08
CNOT4-208ENST00000465721 SCN9AQ15858 1988 aa15.56■□□□□ 0.08
CNOT4-208ENST00000465721 AOC2O75106 756 aa15.56■□□□□ 0.08
CNOT4-208ENST00000465721 NEFMP07197 916 aa15.56■□□□□ 0.08
CNOT4-208ENST00000465721 CXCL9Q07325 125 aa15.56■□□□□ 0.08
CNOT4-208ENST00000465721 SLC10A5Q5PT55 438 aa15.56■□□□□ 0.08
CNOT4-208ENST00000465721 NLRP3Q96P20 1036 aa15.56■□□□□ 0.08
CNOT4-208ENST00000465721 ZNRF3Q9ULT6 936 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms