RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 WWC1Q8IX03 1113 aa20.11■□□□□ 0.81
SCAP-209ENST00000465628 ALDH1B1P30837 517 aa20.1■□□□□ 0.81
SCAP-209ENST00000465628 RIC1Q4ADV7 1423 aa20.1■□□□□ 0.81
SCAP-209ENST00000465628 C8orf58Q8NAV2 365 aa20.09■□□□□ 0.81
SCAP-209ENST00000465628 PLBD2Q8NHP8 589 aa20.09■□□□□ 0.81
SCAP-209ENST00000465628 ZNF428Q96B54 188 aa20.09■□□□□ 0.81
SCAP-209ENST00000465628 CHMP4AQ9BY43 222 aa20.09■□□□□ 0.81
SCAP-209ENST00000465628 ZC3H4Q9UPT8 1303 aaKnown RBP20.08■□□□□ 0.81
SCAP-209ENST00000465628 KLRG2A4D1S0 409 aaPredicted RBP20.08■□□□□ 0.81
SCAP-209ENST00000465628 TCIRG1Q13488 830 aa20.08■□□□□ 0.81
SCAP-209ENST00000465628 CCDC30Q5VVM6 783 aa20.08■□□□□ 0.81
SCAP-209ENST00000465628 ANKRD13DQ6ZTN6 518 aa20.08■□□□□ 0.81
SCAP-209ENST00000465628 C16orf71Q8IYS4 520 aaPredicted RBP20.08■□□□□ 0.81
SCAP-209ENST00000465628 TRMT112Q9UI30 125 aaKnown RBP20.08■□□□□ 0.81
SCAP-209ENST00000465628 RNF123Q5XPI4 1314 aa20.07■□□□□ 0.8
SCAP-209ENST00000465628 RIC3Q7Z5B4 369 aa20.07■□□□□ 0.8
SCAP-209ENST00000465628 NLRP10Q86W26 655 aa20.07■□□□□ 0.8
SCAP-209ENST00000465628 RBM17Q96I25 401 aaKnown RBP20.07■□□□□ 0.8
SCAP-209ENST00000465628 NLRP3Q96P20 1036 aa20.07■□□□□ 0.8
SCAP-209ENST00000465628 NMRK2Q9NPI5 230 aa20.07■□□□□ 0.8
SCAP-209ENST00000465628 CRY2Q49AN0 593 aa20.06■□□□□ 0.8
SCAP-209ENST00000465628 STK31Q9BXU1 1019 aa20.06■□□□□ 0.8
SCAP-209ENST00000465628 IL16Q14005 1332 aa20.05■□□□□ 0.8
SCAP-209ENST00000465628 SH3TC1Q8TE82 1336 aa20.05■□□□□ 0.8
SCAP-209ENST00000465628 ATP5J2-PTCD1G3V325 749 aa20.05■□□□□ 0.8
SCAP-209ENST00000465628 PRELPP51888 382 aa20.05■□□□□ 0.8
SCAP-209ENST00000465628 DICER1Q9UPY3 1922 aaKnown RBP20.05■□□□□ 0.8
SCAP-209ENST00000465628 LTBP3Q9NS15 1303 aa20.04■□□□□ 0.8
SCAP-209ENST00000465628 LAMB2P55268 1798 aa20.04■□□□□ 0.8
SCAP-209ENST00000465628 KIF3CO14782 793 aa20.04■□□□□ 0.8
SCAP-209ENST00000465628 DDX58O95786 925 aaKnown RBP20.04■□□□□ 0.8
SCAP-209ENST00000465628 TWISTNBQ3B726 338 aaPredicted RBP20.04■□□□□ 0.8
SCAP-209ENST00000465628 OLFM4Q6UX06 510 aa20.04■□□□□ 0.8
SCAP-209ENST00000465628 TSPYL6Q8N831 410 aa20.04■□□□□ 0.8
SCAP-209ENST00000465628 TMX4Q9H1E5 349 aaPredicted RBP20.04■□□□□ 0.8
SCAP-209ENST00000465628 FANCIQ9NVI1 1328 aa20.03■□□□□ 0.8
SCAP-209ENST00000465628 TCERG1O14776 1098 aaKnown RBP20.03■□□□□ 0.8
SCAP-209ENST00000465628 PPEF1O14829 653 aaPredicted RBP20.03■□□□□ 0.8
SCAP-209ENST00000465628 HCLS1P14317 486 aaPredicted RBP20.03■□□□□ 0.8
SCAP-209ENST00000465628 C3orf67Q6ZVT6 689 aa20.03■□□□□ 0.8
SCAP-209ENST00000465628 RTKN2Q8IZC4 609 aa20.03■□□□□ 0.8
SCAP-209ENST00000465628 PHAXQ9H814 394 aaKnown RBP20.03■□□□□ 0.8
SCAP-209ENST00000465628 FKBP4Q02790 459 aaKnown RBP eCLIP20.02■□□□□ 0.8
SCAP-209ENST00000465628 NCBP3Q53F19 620 aaKnown RBP20.02■□□□□ 0.8
SCAP-209ENST00000465628 ZNF277Q9NRM2 450 aaPredicted RBP20.02■□□□□ 0.8
SCAP-209ENST00000465628 RTL5Q5HYW3 569 aaPredicted RBP20.01■□□□□ 0.79
SCAP-209ENST00000465628 MYD88Q99836 296 aa20.01■□□□□ 0.79
SCAP-209ENST00000465628 RRAGCQ9HB90 399 aa20.01■□□□□ 0.79
SCAP-209ENST00000465628 DDX60Q8IY21 1712 aaKnown RBP20■□□□□ 0.79
SCAP-209ENST00000465628 HOXA10P31260 410 aaPredicted RBP20■□□□□ 0.79
SCAP-209ENST00000465628 DPY19L2Q6NUT2 758 aa20■□□□□ 0.79
SCAP-209ENST00000465628 WDR63Q8IWG1 891 aa20■□□□□ 0.79
SCAP-209ENST00000465628 SYNE4Q8N205 404 aa20■□□□□ 0.79
SCAP-209ENST00000465628 C7orf43Q8WVR3 580 aa20■□□□□ 0.79
SCAP-209ENST00000465628 CRAMP1Q96RY5 1269 aa20■□□□□ 0.79
SCAP-209ENST00000465628 ISCA1Q9BUE6 129 aa20■□□□□ 0.79
SCAP-209ENST00000465628 GLTPD2A6NH11 291 aa19.99■□□□□ 0.79
SCAP-209ENST00000465628 CC2D2BQ6DHV5 1058 aa19.99■□□□□ 0.79
SCAP-209ENST00000465628 DDX46Q7L014 1031 aaKnown RBP19.99■□□□□ 0.79
SCAP-209ENST00000465628 FAM89AQ96GI7 184 aa19.99■□□□□ 0.79
SCAP-209ENST00000465628 ABCC4O15439 1325 aa19.99■□□□□ 0.79
SCAP-209ENST00000465628 TOMM70O94826 608 aa19.98■□□□□ 0.79
SCAP-209ENST00000465628 SLC10A5Q5PT55 438 aa19.98■□□□□ 0.79
SCAP-209ENST00000465628 MYH16Q9H6N6 1097 aa19.98■□□□□ 0.79
SCAP-209ENST00000465628 MAP3K2Q9Y2U5 619 aa19.97■□□□□ 0.79
SCAP-209ENST00000465628 IARSP41252 1262 aaKnown RBP19.96■□□□□ 0.79
SCAP-209ENST00000465628 NEXNQ0ZGT2 675 aa19.96■□□□□ 0.79
SCAP-209ENST00000465628 IRS4O14654 1257 aaPredicted RBP19.95■□□□□ 0.78
SCAP-209ENST00000465628 SLC4A2P04920 1241 aa19.95■□□□□ 0.78
SCAP-209ENST00000465628 EXOSC9Q06265 439 aaKnown RBP19.95■□□□□ 0.78
SCAP-209ENST00000465628 CWC25Q9NXE8 425 aaPredicted RBP19.95■□□□□ 0.78
SCAP-209ENST00000465628 HSP90B1P14625 803 aaKnown RBP19.94■□□□□ 0.78
SCAP-209ENST00000465628 VEGFAP15692 232 aaPredicted RBP19.94■□□□□ 0.78
SCAP-209ENST00000465628 GRIPAP1Q4V328 841 aa19.94■□□□□ 0.78
SCAP-209ENST00000465628 RBM46Q8TBY0 533 aaKnown RBP19.94■□□□□ 0.78
SCAP-209ENST00000465628 JDP2Q8WYK2 163 aa19.94■□□□□ 0.78
SCAP-209ENST00000465628 PSMD1Q99460 953 aa19.94■□□□□ 0.78
SCAP-209ENST00000465628 METTL22Q9BUU2 404 aaPredicted RBP19.94■□□□□ 0.78
SCAP-209ENST00000465628 WDR90Q96KV7 1748 aa19.93■□□□□ 0.78
SCAP-209ENST00000465628 PI4KAP2A4QPH2 592 aa19.93■□□□□ 0.78
SCAP-209ENST00000465628 FKBP5Q13451 457 aaPredicted RBP19.93■□□□□ 0.78
SCAP-209ENST00000465628 GRAPQ13588 217 aa19.93■□□□□ 0.78
SCAP-209ENST00000465628 KSR2Q6VAB6 950 aa19.93■□□□□ 0.78
SCAP-209ENST00000465628 SLC51AQ86UW1 340 aa19.93■□□□□ 0.78
SCAP-209ENST00000465628 PI4KAP1Q8N8J0 262 aa19.93■□□□□ 0.78
SCAP-209ENST00000465628 ZBTB38Q8NAP3 1195 aaPredicted RBP19.93■□□□□ 0.78
SCAP-209ENST00000465628 CCDC191Q8NCU4 936 aa19.93■□□□□ 0.78
SCAP-209ENST00000465628 GRAPLQ8TC17 118 aaPredicted RBP19.93■□□□□ 0.78
SCAP-209ENST00000465628 ATP6V0A2Q9Y487 856 aa19.93■□□□□ 0.78
SCAP-209ENST00000465628 TAF1P21675 1872 aa19.92■□□□□ 0.78
SCAP-209ENST00000465628 HSPA6P17066 643 aa19.92■□□□□ 0.78
SCAP-209ENST00000465628 TRIM28Q13263 835 aaKnown RBP19.92■□□□□ 0.78
SCAP-209ENST00000465628 LARGE2Q8N3Y3 721 aa19.92■□□□□ 0.78
SCAP-209ENST00000465628 CACNA1FO60840 1977 aa19.92■□□□□ 0.78
SCAP-209ENST00000465628 BBOX1O75936 387 aa19.91■□□□□ 0.78
SCAP-209ENST00000465628 DDNO94850 711 aaPredicted RBP19.91■□□□□ 0.78
SCAP-209ENST00000465628 FLIIQ13045 1269 aa19.91■□□□□ 0.78
SCAP-209ENST00000465628 DPP8Q6V1X1 898 aaPredicted RBP19.91■□□□□ 0.78
SCAP-209ENST00000465628 G2E3Q7L622 706 aa19.91■□□□□ 0.78
SCAP-209ENST00000465628 ZNF541Q9H0D2 1346 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms