RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 FAM89AQ96GI7 184 aa15.15■□□□□ 0.02
APTX-213ENST00000465003 KIAA1551Q9HCM1 1747 aa15.14■□□□□ 0.01
APTX-213ENST00000465003 C3orf67Q6ZVT6 689 aa15.14■□□□□ 0.01
APTX-213ENST00000465003 ISCA1Q9BUE6 129 aa15.14■□□□□ 0.01
APTX-213ENST00000465003 TRMT112Q9UI30 125 aaKnown RBP15.14■□□□□ 0.01
APTX-213ENST00000465003 KIF13BQ9NQT8 1826 aa15.14■□□□□ 0.01
APTX-213ENST00000465003 COL11A2P13942 1736 aaPredicted RBP15.14■□□□□ 0.01
APTX-213ENST00000465003 PXDNLA1KZ92 1463 aa15.13■□□□□ 0.01
APTX-213ENST00000465003 CT47B1P0C2W7 299 aaPredicted RBP15.13■□□□□ 0.01
APTX-213ENST00000465003 HCLS1P14317 486 aaPredicted RBP15.13■□□□□ 0.01
APTX-213ENST00000465003 HSP90AB3PQ58FF7 597 aa15.13■□□□□ 0.01
APTX-213ENST00000465003 DPEP1P16444 411 aa15.13■□□□□ 0.01
APTX-213ENST00000465003 TPTE2Q6XPS3 522 aa15.13■□□□□ 0.01
APTX-213ENST00000465003 CLUAP1Q96AJ1 413 aa15.13■□□□□ 0.01
APTX-213ENST00000465003 UTP14AQ9BVJ6 771 aaKnown RBP15.13■□□□□ 0.01
APTX-213ENST00000465003 ST5P78524 1137 aa15.12■□□□□ 0.01
APTX-213ENST00000465003 NEURL1BA8MQ27 555 aa15.11■□□□□ 0.01
APTX-213ENST00000465003 NEXNQ0ZGT2 675 aa15.11■□□□□ 0.01
APTX-213ENST00000465003 PARP10Q53GL7 1025 aa15.11■□□□□ 0.01
APTX-213ENST00000465003 PPP1R42Q7Z4L9 355 aa15.11■□□□□ 0.01
APTX-213ENST00000465003 SLC51AQ86UW1 340 aa15.11■□□□□ 0.01
APTX-213ENST00000465003 CD2APQ9Y5K6 639 aa15.11■□□□□ 0.01
APTX-213ENST00000465003 CACNA1SQ13698 1873 aa15.11■□□□□ 0.01
APTX-213ENST00000465003 BEND3Q5T5X7 828 aa15.11■□□□□ 0.01
APTX-213ENST00000465003 RGL2O15211 777 aa15.1■□□□□ 0.01
APTX-213ENST00000465003 PLIN1O60240 522 aa15.1■□□□□ 0.01
APTX-213ENST00000465003 CCDC85AQ96PX6 553 aaPredicted RBP15.1■□□□□ 0.01
APTX-213ENST00000465003 CWC25Q9NXE8 425 aaPredicted RBP15.1■□□□□ 0.01
APTX-213ENST00000465003 DDX60Q8IY21 1712 aaKnown RBP15.1■□□□□ 0.01
APTX-213ENST00000465003 TRIM27P14373 513 aa15.09■□□□□ 0.01
APTX-213ENST00000465003 KCNA3P22001 575 aa15.09■□□□□ 0.01
APTX-213ENST00000465003 C2CD5Q86YS7 1000 aa15.09■□□□□ 0.01
APTX-213ENST00000465003 NYXQ9GZU5 481 aa15.09■□□□□ 0.01
APTX-213ENST00000465003 RCAN3Q9UKA8 241 aa15.09■□□□□ 0.01
APTX-213ENST00000465003 PTPRCP08575 1304 aa15.09■□□□□ 0.01
APTX-213ENST00000465003 SH3TC1Q8TE82 1336 aa15.09■□□□□ 0.01
APTX-213ENST00000465003 UBE3BQ7Z3V4 1068 aa15.09■□□□□ 0.01
APTX-213ENST00000465003 LAMB2P55268 1798 aa15.08■□□□□ 0.01
APTX-213ENST00000465003 TAF1P21675 1872 aa15.08■□□□□ 0.01
APTX-213ENST00000465003 KIF16BQ96L93 1317 aa15.08■□□□□ 0.01
APTX-213ENST00000465003 ZNF622Q969S3 477 aaKnown RBP eCLIP15.08■□□□□ 0
APTX-213ENST00000465003 BRIP1Q9BX63 1249 aa15.08■□□□□ 0
APTX-213ENST00000465003 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
APTX-213ENST00000465003 GCKRQ14397 625 aa15.07■□□□□ 0
APTX-213ENST00000465003 CCDC191Q8NCU4 936 aa15.07■□□□□ 0
APTX-213ENST00000465003 LINS1Q8NG48 757 aa15.07■□□□□ 0
APTX-213ENST00000465003 COL4A1P02462 1669 aa15.07■□□□□ 0
APTX-213ENST00000465003 BRCA1P38398 1863 aaKnown RBP15.07■□□□□ 0
APTX-213ENST00000465003 IRS4O14654 1257 aaPredicted RBP15.07■□□□□ 0
APTX-213ENST00000465003 YBX3P16989 372 aaKnown RBP eCLIP15.07■□□□□ 0
APTX-213ENST00000465003 TRIM28Q13263 835 aaKnown RBP15.07■□□□□ 0
APTX-213ENST00000465003 ZBTB38Q8NAP3 1195 aaPredicted RBP15.07■□□□□ 0
APTX-213ENST00000465003 SRCIN1Q9C0H9 1055 aa15.07■□□□□ 0
APTX-213ENST00000465003 IBTKQ9P2D0 1353 aaPredicted RBP15.06■□□□□ 0
APTX-213ENST00000465003 BCS1LQ9Y276 419 aa15.06■□□□□ 0
APTX-213ENST00000465003 SRGNP10124 158 aa15.05■□□□□ 0
APTX-213ENST00000465003 RLBP1P12271 317 aa15.05■□□□□ 0
APTX-213ENST00000465003 PDE6BP35913 854 aa15.05■□□□□ 0
APTX-213ENST00000465003 BRPF1P55201 1214 aaPredicted RBP15.05■□□□□ 0
APTX-213ENST00000465003 TGFB2P61812 414 aa15.05■□□□□ 0
APTX-213ENST00000465003 ATF7IPQ6VMQ6 1270 aa15.05■□□□□ 0
APTX-213ENST00000465003 DLEC1Q9Y238 1755 aa15.05■□□□□ 0
APTX-213ENST00000465003 H0YIN7 160 aa15.05■□□□□ -0
APTX-213ENST00000465003 PCCAP05165 728 aaPredicted RBP15.05■□□□□ -0
APTX-213ENST00000465003 NBPF7P0C2Y1 421 aaPredicted RBP15.05■□□□□ -0
APTX-213ENST00000465003 OLFM4Q6UX06 510 aa15.05■□□□□ -0
APTX-213ENST00000465003 GPR162Q16538 588 aa15.04■□□□□ -0
APTX-213ENST00000465003 ZKSCAN2Q63HK3 967 aa15.04■□□□□ -0
APTX-213ENST00000465003 SLX4Q8IY92 1834 aa15.04■□□□□ -0
APTX-213ENST00000465003 PANK1Q8TE04 598 aa15.04■□□□□ -0
APTX-213ENST00000465003 NLRP3Q96P20 1036 aa15.04■□□□□ -0
APTX-213ENST00000465003 API5Q9BZZ5 524 aaKnown RBP15.04■□□□□ -0
APTX-213ENST00000465003 C9orf78Q9NZ63 289 aaPredicted RBP15.04■□□□□ -0
APTX-213ENST00000465003 CASP7P55210 303 aa15.03■□□□□ -0
APTX-213ENST00000465003 C20orf194Q5TEA3 1177 aa15.03■□□□□ -0
APTX-213ENST00000465003 TMEM57Q8N5G2 664 aa15.03■□□□□ -0
APTX-213ENST00000465003 ABCC4O15439 1325 aa15.03■□□□□ -0
APTX-213ENST00000465003 H7C1W4 665 aa15.02■□□□□ -0
APTX-213ENST00000465003 GRM8O00222 908 aa15.02■□□□□ -0
APTX-213ENST00000465003 EPHA10Q5JZY3 1008 aa15.02■□□□□ -0
APTX-213ENST00000465003 RPGRQ92834 1020 aaKnown RBP15.02■□□□□ -0
APTX-213ENST00000465003 PIM2Q9P1W9 311 aa15.02■□□□□ -0
APTX-213ENST00000465003 CRY2Q49AN0 593 aa15.02□□□□□ -0.01
APTX-213ENST00000465003 SLC10A5Q5PT55 438 aa15.02□□□□□ -0.01
APTX-213ENST00000465003 SEC31BQ9NQW1 1179 aa15.02□□□□□ -0.01
APTX-213ENST00000465003 KLRG2A4D1S0 409 aaPredicted RBP15.01□□□□□ -0.01
APTX-213ENST00000465003 IPO8O15397 1037 aaKnown RBP15.01□□□□□ -0.01
APTX-213ENST00000465003 ALDH1L1O75891 902 aa15.01□□□□□ -0.01
APTX-213ENST00000465003 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
APTX-213ENST00000465003 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
APTX-213ENST00000465003 MASTLQ96GX5 879 aa15.01□□□□□ -0.01
APTX-213ENST00000465003 SUCLG2Q96I99 432 aa15.01□□□□□ -0.01
APTX-213ENST00000465003 MEIS3Q99687 375 aa15.01□□□□□ -0.01
APTX-213ENST00000465003 USP44Q9H0E7 712 aa15.01□□□□□ -0.01
APTX-213ENST00000465003 MYH3P11055 1940 aa15.01□□□□□ -0.01
APTX-213ENST00000465003 C21orf2O43822 256 aa15□□□□□ -0.01
APTX-213ENST00000465003 DALRD3Q5D0E6 543 aaKnown RBP15□□□□□ -0.01
APTX-213ENST00000465003 TTLL6Q8N841 843 aa15□□□□□ -0.01
APTX-213ENST00000465003 ARHGAP45Q92619 1136 aa15□□□□□ -0.01
APTX-213ENST00000465003 RNF123Q5XPI4 1314 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms