RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ZNF34Q8IZ26 560 aa12□□□□□ -0.49
BRCA1-207ENST00000461798 NGEFQ8N5V2 710 aa12□□□□□ -0.49
BRCA1-207ENST00000461798 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
BRCA1-207ENST00000461798 NYXQ9GZU5 481 aa12□□□□□ -0.49
BRCA1-207ENST00000461798 GLTPD2A6NH11 291 aa11.99□□□□□ -0.49
BRCA1-207ENST00000461798 ZEB1P37275 1124 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-207ENST00000461798 CRY2Q49AN0 593 aa11.99□□□□□ -0.49
BRCA1-207ENST00000461798 RRAGCQ9HB90 399 aa11.99□□□□□ -0.49
BRCA1-207ENST00000461798 IBTKQ9P2D0 1353 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-207ENST00000461798 SBF1O95248 1867 aa11.98□□□□□ -0.49
BRCA1-207ENST00000461798 LAMB4A4D0S4 1761 aa11.98□□□□□ -0.49
BRCA1-207ENST00000461798 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
BRCA1-207ENST00000461798 GTF2E1P29083 439 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-207ENST00000461798 ALDH1B1P30837 517 aa11.98□□□□□ -0.49
BRCA1-207ENST00000461798 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
BRCA1-207ENST00000461798 TAOK3Q9H2K8 898 aa11.98□□□□□ -0.49
BRCA1-207ENST00000461798 FAM177BA6PVY3 158 aa11.97□□□□□ -0.49
BRCA1-207ENST00000461798 HOXB7P09629 217 aa11.97□□□□□ -0.49
BRCA1-207ENST00000461798 HOXA10P31260 410 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-207ENST00000461798 FSTL1Q12841 308 aa11.97□□□□□ -0.49
BRCA1-207ENST00000461798 PARP10Q53GL7 1025 aa11.97□□□□□ -0.49
BRCA1-207ENST00000461798 SLC10A5Q5PT55 438 aa11.97□□□□□ -0.49
BRCA1-207ENST00000461798 SUSD4Q5VX71 490 aa11.97□□□□□ -0.49
BRCA1-207ENST00000461798 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
BRCA1-207ENST00000461798 ZBTB3Q9H5J0 574 aa11.97□□□□□ -0.49
BRCA1-207ENST00000461798 DDX21Q9NR30 783 aaKnown RBP eCLIP11.97□□□□□ -0.49
BRCA1-207ENST00000461798 RIC1Q4ADV7 1423 aa11.96□□□□□ -0.49
BRCA1-207ENST00000461798 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.49
BRCA1-207ENST00000461798 ZNF853P0CG23 659 aa11.96□□□□□ -0.49
BRCA1-207ENST00000461798 VEGFAP15692 232 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-207ENST00000461798 GPTP24298 496 aa11.96□□□□□ -0.49
BRCA1-207ENST00000461798 APLP1P51693 650 aa11.96□□□□□ -0.49
BRCA1-207ENST00000461798 PROSER3Q2NL68 480 aa11.96□□□□□ -0.49
BRCA1-207ENST00000461798 ERFEQ4G0M1 354 aa11.96□□□□□ -0.49
BRCA1-207ENST00000461798 CCDC93Q567U6 631 aa11.96□□□□□ -0.49
BRCA1-207ENST00000461798 DPY19L2Q6NUT2 758 aa11.96□□□□□ -0.49
BRCA1-207ENST00000461798 C16orf71Q8IYS4 520 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-207ENST00000461798 COL11A2P13942 1736 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-207ENST00000461798 POTECB2RU33 542 aa11.95□□□□□ -0.5
BRCA1-207ENST00000461798 GALR2O43603 387 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-207ENST00000461798 NTSR2O95665 410 aa11.95□□□□□ -0.5
BRCA1-207ENST00000461798 CC2D2BQ6DHV5 1058 aa11.95□□□□□ -0.5
BRCA1-207ENST00000461798 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
BRCA1-207ENST00000461798 PPP1R42Q7Z4L9 355 aa11.95□□□□□ -0.5
BRCA1-207ENST00000461798 NUTM1Q86Y26 1132 aa11.95□□□□□ -0.5
BRCA1-207ENST00000461798 RTKN2Q8IZC4 609 aa11.95□□□□□ -0.5
BRCA1-207ENST00000461798 SLX4Q8IY92 1834 aa11.95□□□□□ -0.5
BRCA1-207ENST00000461798 ABCC12Q96J65 1359 aa11.94□□□□□ -0.5
BRCA1-207ENST00000461798 RNF123Q5XPI4 1314 aa11.94□□□□□ -0.5
BRCA1-207ENST00000461798 APAF1O14727 1248 aa11.94□□□□□ -0.5
BRCA1-207ENST00000461798 ANXA1P04083 346 aa11.94□□□□□ -0.5
BRCA1-207ENST00000461798 FKBP4Q02790 459 aaKnown RBP eCLIP11.94□□□□□ -0.5
BRCA1-207ENST00000461798 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
BRCA1-207ENST00000461798 HSP90AB3PQ58FF7 597 aa11.94□□□□□ -0.5
BRCA1-207ENST00000461798 XAGE3Q8WTP9 111 aa11.94□□□□□ -0.5
BRCA1-207ENST00000461798 CRAMP1Q96RY5 1269 aa11.94□□□□□ -0.5
BRCA1-207ENST00000461798 FER1L6Q2WGJ9 1857 aa11.93□□□□□ -0.5
BRCA1-207ENST00000461798 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
BRCA1-207ENST00000461798 TCIRG1Q13488 830 aa11.93□□□□□ -0.5
BRCA1-207ENST00000461798 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
BRCA1-207ENST00000461798 DNAJC5GQ8N7S2 189 aa11.93□□□□□ -0.5
BRCA1-207ENST00000461798 SMC1BQ8NDV3 1235 aa11.93□□□□□ -0.5
BRCA1-207ENST00000461798 UTP14AQ9BVJ6 771 aaKnown RBP11.93□□□□□ -0.5
BRCA1-207ENST00000461798 IFT57Q9NWB7 429 aa11.93□□□□□ -0.5
BRCA1-207ENST00000461798 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
BRCA1-207ENST00000461798 GNAI1P63096 354 aa11.92□□□□□ -0.5
BRCA1-207ENST00000461798 HDGFL1Q5TGJ6 251 aa11.92□□□□□ -0.5
BRCA1-207ENST00000461798 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
BRCA1-207ENST00000461798 NLRP10Q86W26 655 aa11.92□□□□□ -0.5
BRCA1-207ENST00000461798 NECTIN2Q92692 538 aa11.92□□□□□ -0.5
BRCA1-207ENST00000461798 RPGRQ92834 1020 aaKnown RBP11.92□□□□□ -0.5
BRCA1-207ENST00000461798 RBM17Q96I25 401 aaKnown RBP11.92□□□□□ -0.5
BRCA1-207ENST00000461798 NLRP3Q96P20 1036 aa11.92□□□□□ -0.5
BRCA1-207ENST00000461798 PSMD1Q99460 953 aa11.92□□□□□ -0.5
BRCA1-207ENST00000461798 MBIPQ9NS73 344 aa11.92□□□□□ -0.5
BRCA1-207ENST00000461798 DBF4Q9UBU7 674 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-207ENST00000461798 NUP98P52948 1817 aa11.92□□□□□ -0.5
BRCA1-207ENST00000461798 SNED1Q8TER0 1413 aa11.92□□□□□ -0.5
BRCA1-207ENST00000461798 AIMP1Q12904 312 aaKnown RBP11.91□□□□□ -0.5
BRCA1-207ENST00000461798 OLFM4Q6UX06 510 aa11.91□□□□□ -0.5
BRCA1-207ENST00000461798 C3orf67Q6ZVT6 689 aa11.91□□□□□ -0.5
BRCA1-207ENST00000461798 SYNE4Q8N205 404 aa11.91□□□□□ -0.5
BRCA1-207ENST00000461798 PLBD2Q8NHP8 589 aa11.91□□□□□ -0.5
BRCA1-207ENST00000461798 HYPKQ9NX55 129 aa11.91□□□□□ -0.5
BRCA1-207ENST00000461798 CHPF2Q9P2E5 772 aa11.91□□□□□ -0.5
BRCA1-207ENST00000461798 ARFGEF2Q9Y6D5 1785 aa11.91□□□□□ -0.5
BRCA1-207ENST00000461798 DDNO94850 711 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-207ENST00000461798 TRIM28Q13263 835 aaKnown RBP11.9□□□□□ -0.5
BRCA1-207ENST00000461798 CCDC184Q52MB2 194 aa11.9□□□□□ -0.5
BRCA1-207ENST00000461798 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
BRCA1-207ENST00000461798 L3MBTL3Q96JM7 780 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-207ENST00000461798 ZNF277Q9NRM2 450 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-207ENST00000461798 TNRC6CQ9HCJ0 1690 aaKnown RBP11.9□□□□□ -0.5
BRCA1-207ENST00000461798 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-207ENST00000461798 FZD9O00144 591 aa11.89□□□□□ -0.51
BRCA1-207ENST00000461798 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
BRCA1-207ENST00000461798 CCDC27Q2M243 656 aa11.89□□□□□ -0.51
BRCA1-207ENST00000461798 ISCA1Q9BUE6 129 aa11.89□□□□□ -0.51
BRCA1-207ENST00000461798 CHMP4AQ9BY43 222 aa11.89□□□□□ -0.51
BRCA1-207ENST00000461798 WDR90Q96KV7 1748 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms