RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 OLFM4Q6UX06 510 aa23.41■■□□□ 1.34
SSB-206ENST00000461708 RUNDC1Q96C34 613 aa23.41■■□□□ 1.34
SSB-206ENST00000461708 CRAMP1Q96RY5 1269 aa23.41■■□□□ 1.34
SSB-206ENST00000461708 RNF123Q5XPI4 1314 aa23.4■■□□□ 1.34
SSB-206ENST00000461708 EIF2S2P20042 333 aaKnown RBP23.4■■□□□ 1.34
SSB-206ENST00000461708 IARSP41252 1262 aaKnown RBP23.4■■□□□ 1.34
SSB-206ENST00000461708 SLC10A5Q5PT55 438 aa23.4■■□□□ 1.34
SSB-206ENST00000461708 SYNE4Q8N205 404 aa23.4■■□□□ 1.34
SSB-206ENST00000461708 FZD9O00144 591 aa23.39■■□□□ 1.33
SSB-206ENST00000461708 WDR43Q15061 677 aaKnown RBP eCLIP23.38■■□□□ 1.33
SSB-206ENST00000461708 RBM17Q96I25 401 aaKnown RBP23.38■■□□□ 1.33
SSB-206ENST00000461708 PROSER3Q2NL68 480 aa23.37■■□□□ 1.33
SSB-206ENST00000461708 HSP90AB3PQ58FF7 597 aa23.37■■□□□ 1.33
SSB-206ENST00000461708 LDHDQ86WU2 507 aa23.37■■□□□ 1.33
SSB-206ENST00000461708 UTP14AQ9BVJ6 771 aaKnown RBP23.37■■□□□ 1.33
SSB-206ENST00000461708 TAF1DQ9H5J8 278 aaPredicted RBP23.37■■□□□ 1.33
SSB-206ENST00000461708 DDX21Q9NR30 783 aaKnown RBP eCLIP23.37■■□□□ 1.33
SSB-206ENST00000461708 TRIM35Q9UPQ4 493 aa23.37■■□□□ 1.33
SSB-206ENST00000461708 ZNF541Q9H0D2 1346 aa23.36■■□□□ 1.33
SSB-206ENST00000461708 CCDC146Q8IYE0 955 aa23.36■■□□□ 1.33
SSB-206ENST00000461708 NLRP3Q96P20 1036 aa23.36■■□□□ 1.33
SSB-206ENST00000461708 ANKRD36CQ5JPF3 1778 aa23.35■■□□□ 1.33
SSB-206ENST00000461708 HOXB7P09629 217 aa23.35■■□□□ 1.33
SSB-206ENST00000461708 COPS6Q7L5N1 327 aa23.35■■□□□ 1.33
SSB-206ENST00000461708 GPC2Q8N158 579 aa23.35■■□□□ 1.33
SSB-206ENST00000461708 JDP2Q8WYK2 163 aa23.35■■□□□ 1.33
SSB-206ENST00000461708 POTEIP0CG38 1075 aa23.34■■□□□ 1.33
SSB-206ENST00000461708 POTEJP0CG39 1038 aa23.34■■□□□ 1.33
SSB-206ENST00000461708 NEUROD2Q15784 382 aa23.34■■□□□ 1.33
SSB-206ENST00000461708 CREBZFQ9NS37 354 aa23.34■■□□□ 1.33
SSB-206ENST00000461708 HACL1Q9UJ83 578 aa23.34■■□□□ 1.33
SSB-206ENST00000461708 ADAMTS8Q9UP79 889 aa23.34■■□□□ 1.33
SSB-206ENST00000461708 PPEF1O14829 653 aaPredicted RBP23.33■■□□□ 1.33
SSB-206ENST00000461708 ANXA1P04083 346 aa23.33■■□□□ 1.33
SSB-206ENST00000461708 C3orf67Q6ZVT6 689 aa23.33■■□□□ 1.33
SSB-206ENST00000461708 XAGE3Q8WTP9 111 aa23.33■■□□□ 1.33
SSB-206ENST00000461708 TCIRG1Q13488 830 aa23.32■■□□□ 1.32
SSB-206ENST00000461708 PNMA8AQ86V59 439 aaPredicted RBP23.32■■□□□ 1.32
SSB-206ENST00000461708 NLRP10Q86W26 655 aa23.32■■□□□ 1.32
SSB-206ENST00000461708 VPS33BQ9H267 617 aa23.32■■□□□ 1.32
SSB-206ENST00000461708 PRKRIP1Q9H875 184 aaPredicted RBP23.32■■□□□ 1.32
SSB-206ENST00000461708 CFAP44Q96MT7 982 aa23.31■■□□□ 1.32
SSB-206ENST00000461708 ATP6V0A2Q9Y487 856 aa23.31■■□□□ 1.32
SSB-206ENST00000461708 PASKQ96RG2 1323 aa23.31■■□□□ 1.32
SSB-206ENST00000461708 ADAMTSL1Q8N6G6 1762 aa23.3■■□□□ 1.32
SSB-206ENST00000461708 EPHX2P34913 555 aa23.3■■□□□ 1.32
SSB-206ENST00000461708 TMX4Q9H1E5 349 aaPredicted RBP23.3■■□□□ 1.32
SSB-206ENST00000461708 BBOX1O75936 387 aa23.29■■□□□ 1.32
SSB-206ENST00000461708 EIF6P56537 245 aaKnown RBP23.29■■□□□ 1.32
SSB-206ENST00000461708 AIMP1Q12904 312 aaKnown RBP23.29■■□□□ 1.32
SSB-206ENST00000461708 KRT24Q2M2I5 525 aa23.29■■□□□ 1.32
SSB-206ENST00000461708 NECTIN2Q92692 538 aa23.29■■□□□ 1.32
SSB-206ENST00000461708 COL4A5P29400 1685 aa23.28■■□□□ 1.32
SSB-206ENST00000461708 HDGFL1Q5TGJ6 251 aa23.28■■□□□ 1.32
SSB-206ENST00000461708 LARGE2Q8N3Y3 721 aa23.28■■□□□ 1.32
SSB-206ENST00000461708 CHPF2Q9P2E5 772 aa23.28■■□□□ 1.32
SSB-206ENST00000461708 DBF4Q9UBU7 674 aaPredicted RBP23.28■■□□□ 1.32
SSB-206ENST00000461708 LAS1LQ9Y4W2 734 aaKnown RBP23.28■■□□□ 1.32
SSB-206ENST00000461708 SH3TC1Q8TE82 1336 aa23.28■■□□□ 1.32
SSB-206ENST00000461708 LAMB2P55268 1798 aa23.27■■□□□ 1.32
SSB-206ENST00000461708 ITGBL1O95965 494 aaPredicted RBP23.27■■□□□ 1.32
SSB-206ENST00000461708 PLBD2Q8NHP8 589 aa23.27■■□□□ 1.32
SSB-206ENST00000461708 ABCC4O15439 1325 aa23.27■■□□□ 1.32
SSB-206ENST00000461708 RTFDC1Q9BY42 306 aaPredicted RBP23.26■■□□□ 1.31
SSB-206ENST00000461708 TRMT112Q9UI30 125 aaKnown RBP23.26■■□□□ 1.31
SSB-206ENST00000461708 ZNF853P0CG23 659 aa23.25■■□□□ 1.31
SSB-206ENST00000461708 EAPPQ56P03 285 aaPredicted RBP23.25■■□□□ 1.31
SSB-206ENST00000461708 ANKRD13DQ6ZTN6 518 aa23.25■■□□□ 1.31
SSB-206ENST00000461708 SP8Q8IXZ3 490 aa23.25■■□□□ 1.31
SSB-206ENST00000461708 SUPT20HQ8NEM7 779 aa23.25■■□□□ 1.31
SSB-206ENST00000461708 HYPKQ9NX55 129 aa23.25■■□□□ 1.31
SSB-206ENST00000461708 HCLS1P14317 486 aaPredicted RBP23.24■■□□□ 1.31
SSB-206ENST00000461708 CALD1Q05682 793 aaKnown RBP23.24■■□□□ 1.31
SSB-206ENST00000461708 TMC4Q7Z404 712 aa23.24■■□□□ 1.31
SSB-206ENST00000461708 TCERG1O14776 1098 aaKnown RBP23.23■■□□□ 1.31
SSB-206ENST00000461708 DUSP27Q5VZP5 1158 aa23.23■■□□□ 1.31
SSB-206ENST00000461708 DDX46Q7L014 1031 aaKnown RBP23.23■■□□□ 1.31
SSB-206ENST00000461708 NIM1KQ8IY84 436 aa23.23■■□□□ 1.31
SSB-206ENST00000461708 ISCA1Q9BUE6 129 aa23.23■■□□□ 1.31
SSB-206ENST00000461708 MBIPQ9NS73 344 aa23.23■■□□□ 1.31
SSB-206ENST00000461708 CLEC11AQ9Y240 323 aa23.23■■□□□ 1.31
SSB-206ENST00000461708 TMEM88BA6NKF7 163 aa23.22■■□□□ 1.31
SSB-206ENST00000461708 PPIP5K2O43314 1243 aa23.22■■□□□ 1.31
SSB-206ENST00000461708 LMOD1P29536 600 aaPredicted RBP23.22■■□□□ 1.31
SSB-206ENST00000461708 TRIM28Q13263 835 aaKnown RBP23.22■■□□□ 1.31
SSB-206ENST00000461708 IFT57Q9NWB7 429 aa23.22■■□□□ 1.31
SSB-206ENST00000461708 GJA3Q9Y6H8 435 aa23.22■■□□□ 1.31
SSB-206ENST00000461708 CNTNAP1P78357 1384 aa23.22■■□□□ 1.31
SSB-206ENST00000461708 SCNN1DP51172 638 aa23.21■■□□□ 1.31
SSB-206ENST00000461708 GRAPQ13588 217 aa23.21■■□□□ 1.31
SSB-206ENST00000461708 SLC51AQ86UW1 340 aa23.21■■□□□ 1.31
SSB-206ENST00000461708 CNTROBQ8N137 903 aa23.21■■□□□ 1.31
SSB-206ENST00000461708 GRAPLQ8TC17 118 aaPredicted RBP23.21■■□□□ 1.31
SSB-206ENST00000461708 HSPA1AP0DMV8 641 aaKnown RBP23.2■■□□□ 1.3
SSB-206ENST00000461708 HSPA1BP0DMV9 641 aaKnown RBP23.2■■□□□ 1.3
SSB-206ENST00000461708 GNAI1P63096 354 aa23.2■■□□□ 1.3
SSB-206ENST00000461708 COL13A1Q5TAT6 717 aaPredicted RBP23.2■■□□□ 1.3
SSB-206ENST00000461708 DPP8Q6V1X1 898 aaPredicted RBP23.2■■□□□ 1.3
SSB-206ENST00000461708 ZNRF3Q9ULT6 936 aa23.2■■□□□ 1.3
SSB-206ENST00000461708 LTBP1Q14766 1721 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms