RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 ARFGEF2Q9Y6D5 1785 aa17.58■□□□□ 0.4
CHRD-209ENST00000461120 RCAN3Q9UKA8 241 aa17.57■□□□□ 0.4
CHRD-209ENST00000461120 BCS1LQ9Y276 419 aa17.57■□□□□ 0.4
CHRD-209ENST00000461120 MAP3K2Q9Y2U5 619 aa17.57■□□□□ 0.4
CHRD-209ENST00000461120 PTPRCP08575 1304 aa17.56■□□□□ 0.4
CHRD-209ENST00000461120 FOXN1O15353 648 aa17.56■□□□□ 0.4
CHRD-209ENST00000461120 MMP10P09238 476 aa17.56■□□□□ 0.4
CHRD-209ENST00000461120 TCIRG1Q13488 830 aa17.56■□□□□ 0.4
CHRD-209ENST00000461120 HSP90AB3PQ58FF7 597 aa17.56■□□□□ 0.4
CHRD-209ENST00000461120 BICDL1Q6ZP65 573 aa17.56■□□□□ 0.4
CHRD-209ENST00000461120 ZNF34Q8IZ26 560 aa17.56■□□□□ 0.4
CHRD-209ENST00000461120 KIF16BQ96L93 1317 aa17.55■□□□□ 0.4
CHRD-209ENST00000461120 RGS19P49795 217 aa17.55■□□□□ 0.4
CHRD-209ENST00000461120 DDR1Q08345 913 aa17.55■□□□□ 0.4
CHRD-209ENST00000461120 C9orf131Q5VYM1 1079 aa17.55■□□□□ 0.4
CHRD-209ENST00000461120 SETDB2Q96T68 719 aa17.55■□□□□ 0.4
CHRD-209ENST00000461120 METTL22Q9BUU2 404 aaPredicted RBP17.55■□□□□ 0.4
CHRD-209ENST00000461120 NOB1Q9ULX3 412 aaKnown RBP17.55■□□□□ 0.4
CHRD-209ENST00000461120 NIP7Q9Y221 180 aaKnown RBP eCLIP17.55■□□□□ 0.4
CHRD-209ENST00000461120 ANKRD36CQ5JPF3 1778 aa17.55■□□□□ 0.4
CHRD-209ENST00000461120 PXDNLA1KZ92 1463 aa17.55■□□□□ 0.4
CHRD-209ENST00000461120 F6X3S4 739 aa17.54■□□□□ 0.4
CHRD-209ENST00000461120 POLRMTO00411 1230 aaKnown RBP17.54■□□□□ 0.4
CHRD-209ENST00000461120 GPTP24298 496 aa17.54■□□□□ 0.4
CHRD-209ENST00000461120 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
CHRD-209ENST00000461120 MYD88Q99836 296 aa17.54■□□□□ 0.4
CHRD-209ENST00000461120 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
CHRD-209ENST00000461120 CCDC85CA6NKD9 419 aa17.53■□□□□ 0.4
CHRD-209ENST00000461120 PARP3Q9Y6F1 533 aa17.53■□□□□ 0.4
CHRD-209ENST00000461120 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
CHRD-209ENST00000461120 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
CHRD-209ENST00000461120 UBN2Q6ZU65 1347 aa17.52■□□□□ 0.4
CHRD-209ENST00000461120 ATP5J2-PTCD1G3V325 749 aa17.52■□□□□ 0.4
CHRD-209ENST00000461120 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.4
CHRD-209ENST00000461120 ARHGAP45Q92619 1136 aa17.52■□□□□ 0.4
CHRD-209ENST00000461120 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
CHRD-209ENST00000461120 SERPINB2P05120 415 aa17.51■□□□□ 0.39
CHRD-209ENST00000461120 NEXNQ0ZGT2 675 aa17.51■□□□□ 0.39
CHRD-209ENST00000461120 PARP10Q53GL7 1025 aa17.51■□□□□ 0.39
CHRD-209ENST00000461120 NLRP10Q86W26 655 aa17.51■□□□□ 0.39
CHRD-209ENST00000461120 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
CHRD-209ENST00000461120 API5Q9BZZ5 524 aaKnown RBP17.51■□□□□ 0.39
CHRD-209ENST00000461120 NRXN2Q9P2S2 1712 aa17.5■□□□□ 0.39
CHRD-209ENST00000461120 IGKV5-2P06315 115 aa17.5■□□□□ 0.39
CHRD-209ENST00000461120 TGFB2P61812 414 aa17.5■□□□□ 0.39
CHRD-209ENST00000461120 SUSD4Q5VX71 490 aa17.5■□□□□ 0.39
CHRD-209ENST00000461120 ZKSCAN2Q63HK3 967 aa17.5■□□□□ 0.39
CHRD-209ENST00000461120 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
CHRD-209ENST00000461120 ARFGEF1Q9Y6D6 1849 aa17.49■□□□□ 0.39
CHRD-209ENST00000461120 FAM177BA6PVY3 158 aa17.49■□□□□ 0.39
CHRD-209ENST00000461120 BEND3Q5T5X7 828 aa17.49■□□□□ 0.39
CHRD-209ENST00000461120 SLC4A10Q6U841 1118 aa17.49■□□□□ 0.39
CHRD-209ENST00000461120 ATF7IPQ6VMQ6 1270 aa17.49■□□□□ 0.39
CHRD-209ENST00000461120 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
CHRD-209ENST00000461120 LINS1Q8NG48 757 aa17.49■□□□□ 0.39
CHRD-209ENST00000461120 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
CHRD-209ENST00000461120 KIF13BQ9NQT8 1826 aa17.49■□□□□ 0.39
CHRD-209ENST00000461120 NEURL1BA8MQ27 555 aa17.48■□□□□ 0.39
CHRD-209ENST00000461120 NTSR2O95665 410 aa17.48■□□□□ 0.39
CHRD-209ENST00000461120 TRIM27P14373 513 aa17.48■□□□□ 0.39
CHRD-209ENST00000461120 VEGFAP15692 232 aaPredicted RBP17.48■□□□□ 0.39
CHRD-209ENST00000461120 CWF19L2Q2TBE0 894 aaKnown RBP17.48■□□□□ 0.39
CHRD-209ENST00000461120 PPP1R42Q7Z4L9 355 aa17.48■□□□□ 0.39
CHRD-209ENST00000461120 CCDC191Q8NCU4 936 aa17.48■□□□□ 0.39
CHRD-209ENST00000461120 NYXQ9GZU5 481 aa17.48■□□□□ 0.39
CHRD-209ENST00000461120 MKRN1Q9UHC7 482 aaKnown RBP17.48■□□□□ 0.39
CHRD-209ENST00000461120 TNNQ9UQP3 1299 aa17.48■□□□□ 0.39
CHRD-209ENST00000461120 PRR5LQ6MZQ0 368 aa17.47■□□□□ 0.39
CHRD-209ENST00000461120 TPTE2Q6XPS3 522 aa17.47■□□□□ 0.39
CHRD-209ENST00000461120 CNBD1Q8NA66 436 aa17.47■□□□□ 0.39
CHRD-209ENST00000461120 UTP14AQ9BVJ6 771 aaKnown RBP17.47■□□□□ 0.39
CHRD-209ENST00000461120 CWC25Q9NXE8 425 aaPredicted RBP17.47■□□□□ 0.39
CHRD-209ENST00000461120 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
CHRD-209ENST00000461120 SBF1O95248 1867 aa17.46■□□□□ 0.39
CHRD-209ENST00000461120 TNRC18O15417 2968 aaPredicted RBP17.46■□□□□ 0.39
CHRD-209ENST00000461120 ALDH1L1O75891 902 aa17.46■□□□□ 0.39
CHRD-209ENST00000461120 LBX1P52954 281 aa17.46■□□□□ 0.39
CHRD-209ENST00000461120 SRCIN1Q9C0H9 1055 aa17.46■□□□□ 0.39
CHRD-209ENST00000461120 CREBZFQ9NS37 354 aa17.46■□□□□ 0.39
CHRD-209ENST00000461120 TRMT112Q9UI30 125 aaKnown RBP17.46■□□□□ 0.39
CHRD-209ENST00000461120 ABCC4O15439 1325 aa17.46■□□□□ 0.38
CHRD-209ENST00000461120 GCKRQ14397 625 aa17.45■□□□□ 0.38
CHRD-209ENST00000461120 NUTM1Q86Y26 1132 aa17.45■□□□□ 0.38
CHRD-209ENST00000461120 CCDC24Q8N4L8 307 aa17.45■□□□□ 0.38
CHRD-209ENST00000461120 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
CHRD-209ENST00000461120 NPHP1O15259 732 aa17.44■□□□□ 0.38
CHRD-209ENST00000461120 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
CHRD-209ENST00000461120 ST5P78524 1137 aa17.44■□□□□ 0.38
CHRD-209ENST00000461120 ERFEQ4G0M1 354 aa17.44■□□□□ 0.38
CHRD-209ENST00000461120 CLUAP1Q96AJ1 413 aa17.44■□□□□ 0.38
CHRD-209ENST00000461120 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
CHRD-209ENST00000461120 BRCA1P38398 1863 aaKnown RBP17.44■□□□□ 0.38
CHRD-209ENST00000461120 ABCC12Q96J65 1359 aa17.43■□□□□ 0.38
CHRD-209ENST00000461120 PLIN1O60240 522 aa17.43■□□□□ 0.38
CHRD-209ENST00000461120 PCCAP05165 728 aaPredicted RBP17.43■□□□□ 0.38
CHRD-209ENST00000461120 CCT4P50991 539 aaKnown RBP17.43■□□□□ 0.38
CHRD-209ENST00000461120 INTS3Q68E01 1043 aaKnown RBP17.43■□□□□ 0.38
CHRD-209ENST00000461120 SYNE4Q8N205 404 aa17.43■□□□□ 0.38
CHRD-209ENST00000461120 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
CHRD-209ENST00000461120 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms