RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 NMRK2Q9NPI5 230 aa13.01□□□□□ -0.33
HDLBP-228ENST00000459788 HYPKQ9NX55 129 aa13.01□□□□□ -0.33
HDLBP-228ENST00000459788 UBN2Q6ZU65 1347 aa13.01□□□□□ -0.33
HDLBP-228ENST00000459788 VEGFAP15692 232 aaPredicted RBP13□□□□□ -0.33
HDLBP-228ENST00000459788 APLP1P51693 650 aa13□□□□□ -0.33
HDLBP-228ENST00000459788 PRELPP51888 382 aa13□□□□□ -0.33
HDLBP-228ENST00000459788 TCIRG1Q13488 830 aa13□□□□□ -0.33
HDLBP-228ENST00000459788 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
HDLBP-228ENST00000459788 SUSD4Q5VX71 490 aa13□□□□□ -0.33
HDLBP-228ENST00000459788 COPS6Q7L5N1 327 aa13□□□□□ -0.33
HDLBP-228ENST00000459788 PSMD1Q99460 953 aa13□□□□□ -0.33
HDLBP-228ENST00000459788 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
HDLBP-228ENST00000459788 SNED1Q8TER0 1413 aa12.99□□□□□ -0.33
HDLBP-228ENST00000459788 ABCC12Q96J65 1359 aa12.99□□□□□ -0.33
HDLBP-228ENST00000459788 FKBP4Q02790 459 aaKnown RBP eCLIP12.99□□□□□ -0.33
HDLBP-228ENST00000459788 PROSER3Q2NL68 480 aa12.99□□□□□ -0.33
HDLBP-228ENST00000459788 ERFEQ4G0M1 354 aa12.99□□□□□ -0.33
HDLBP-228ENST00000459788 PLBD2Q8NHP8 589 aa12.99□□□□□ -0.33
HDLBP-228ENST00000459788 XAGE3Q8WTP9 111 aa12.99□□□□□ -0.33
HDLBP-228ENST00000459788 RPGRQ92834 1020 aaKnown RBP12.99□□□□□ -0.33
HDLBP-228ENST00000459788 RBM17Q96I25 401 aaKnown RBP12.99□□□□□ -0.33
HDLBP-228ENST00000459788 NLRP3Q96P20 1036 aa12.99□□□□□ -0.33
HDLBP-228ENST00000459788 MBIPQ9NS73 344 aa12.99□□□□□ -0.33
HDLBP-228ENST00000459788 LAS1LQ9Y4W2 734 aaKnown RBP12.99□□□□□ -0.33
HDLBP-228ENST00000459788 GPTP24298 496 aa12.98□□□□□ -0.33
HDLBP-228ENST00000459788 TRIM28Q13263 835 aaKnown RBP12.98□□□□□ -0.33
HDLBP-228ENST00000459788 DUSP27Q5VZP5 1158 aa12.98□□□□□ -0.33
HDLBP-228ENST00000459788 VPS33BQ9H267 617 aa12.98□□□□□ -0.33
HDLBP-228ENST00000459788 RRAGCQ9HB90 399 aa12.98□□□□□ -0.33
HDLBP-228ENST00000459788 DDX60Q8IY21 1712 aaKnown RBP12.97□□□□□ -0.33
HDLBP-228ENST00000459788 IL16Q14005 1332 aa12.97□□□□□ -0.33
HDLBP-228ENST00000459788 FAM177BA6PVY3 158 aa12.97□□□□□ -0.33
HDLBP-228ENST00000459788 ANP32CO43423 234 aa12.97□□□□□ -0.33
HDLBP-228ENST00000459788 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
HDLBP-228ENST00000459788 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
HDLBP-228ENST00000459788 NUTM1Q86Y26 1132 aa12.97□□□□□ -0.33
HDLBP-228ENST00000459788 SMC1BQ8NDV3 1235 aa12.97□□□□□ -0.33
HDLBP-228ENST00000459788 CHPF2Q9P2E5 772 aa12.97□□□□□ -0.33
HDLBP-228ENST00000459788 HSP90B1P14625 803 aaKnown RBP12.96□□□□□ -0.33
HDLBP-228ENST00000459788 TMC4Q7Z404 712 aa12.96□□□□□ -0.33
HDLBP-228ENST00000459788 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-228ENST00000459788 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-228ENST00000459788 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-228ENST00000459788 SH3TC1Q8TE82 1336 aa12.95□□□□□ -0.34
HDLBP-228ENST00000459788 IQCA1LA6NCM1 817 aa12.95□□□□□ -0.34
HDLBP-228ENST00000459788 BBOX1O75936 387 aa12.95□□□□□ -0.34
HDLBP-228ENST00000459788 ANXA1P04083 346 aa12.95□□□□□ -0.34
HDLBP-228ENST00000459788 AIMP1Q12904 312 aaKnown RBP12.95□□□□□ -0.34
HDLBP-228ENST00000459788 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
HDLBP-228ENST00000459788 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
HDLBP-228ENST00000459788 LRRC37AA6NMS7 1700 aa12.95□□□□□ -0.34
HDLBP-228ENST00000459788 MYH3P11055 1940 aa12.94□□□□□ -0.34
HDLBP-228ENST00000459788 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
HDLBP-228ENST00000459788 CCDC30Q5VVM6 783 aa12.94□□□□□ -0.34
HDLBP-228ENST00000459788 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
HDLBP-228ENST00000459788 POTECB2RU33 542 aa12.93□□□□□ -0.34
HDLBP-228ENST00000459788 FZD9O00144 591 aa12.93□□□□□ -0.34
HDLBP-228ENST00000459788 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-228ENST00000459788 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
HDLBP-228ENST00000459788 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
HDLBP-228ENST00000459788 SUPT20HQ8NEM7 779 aa12.93□□□□□ -0.34
HDLBP-228ENST00000459788 NECTIN2Q92692 538 aa12.93□□□□□ -0.34
HDLBP-228ENST00000459788 MRS2Q9HD23 443 aa12.93□□□□□ -0.34
HDLBP-228ENST00000459788 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
HDLBP-228ENST00000459788 DDX58O95786 925 aaKnown RBP12.92□□□□□ -0.34
HDLBP-228ENST00000459788 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
HDLBP-228ENST00000459788 WWC1Q8IX03 1113 aa12.92□□□□□ -0.34
HDLBP-228ENST00000459788 SP8Q8IXZ3 490 aa12.92□□□□□ -0.34
HDLBP-228ENST00000459788 JDP2Q8WYK2 163 aa12.92□□□□□ -0.34
HDLBP-228ENST00000459788 TAF1P21675 1872 aa12.91□□□□□ -0.34
HDLBP-228ENST00000459788 SF3B3Q15393 1217 aaKnown RBP12.91□□□□□ -0.34
HDLBP-228ENST00000459788 CCDC184Q52MB2 194 aa12.91□□□□□ -0.34
HDLBP-228ENST00000459788 DDX46Q7L014 1031 aaKnown RBP12.91□□□□□ -0.34
HDLBP-228ENST00000459788 GPC2Q8N158 579 aa12.91□□□□□ -0.34
HDLBP-228ENST00000459788 CCDC191Q8NCU4 936 aa12.91□□□□□ -0.34
HDLBP-228ENST00000459788 RTFDC1Q9BY42 306 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-228ENST00000459788 ZNF277Q9NRM2 450 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-228ENST00000459788 ABCC4O15439 1325 aa12.9□□□□□ -0.34
HDLBP-228ENST00000459788 ADAMTSL1Q8N6G6 1762 aa12.9□□□□□ -0.34
HDLBP-228ENST00000459788 GRAPQ13588 217 aa12.9□□□□□ -0.34
HDLBP-228ENST00000459788 RIC3Q7Z5B4 369 aa12.9□□□□□ -0.34
HDLBP-228ENST00000459788 C8orf58Q8NAV2 365 aa12.9□□□□□ -0.34
HDLBP-228ENST00000459788 GRAPLQ8TC17 118 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-228ENST00000459788 DDNO94850 711 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-228ENST00000459788 C3orf67Q6ZVT6 689 aa12.89□□□□□ -0.35
HDLBP-228ENST00000459788 PNMA8AQ86V59 439 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-228ENST00000459788 DNAJC5GQ8N7S2 189 aa12.89□□□□□ -0.35
HDLBP-228ENST00000459788 ZBTB38Q8NAP3 1195 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-228ENST00000459788 STK31Q9BXU1 1019 aa12.89□□□□□ -0.35
HDLBP-228ENST00000459788 HCLS1P14317 486 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-228ENST00000459788 EIF6P56537 245 aaKnown RBP12.88□□□□□ -0.35
HDLBP-228ENST00000459788 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
HDLBP-228ENST00000459788 OLFM4Q6UX06 510 aa12.88□□□□□ -0.35
HDLBP-228ENST00000459788 LDHDQ86WU2 507 aa12.88□□□□□ -0.35
HDLBP-228ENST00000459788 HACL1Q9UJ83 578 aa12.88□□□□□ -0.35
HDLBP-228ENST00000459788 PCCAP05165 728 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-228ENST00000459788 KSR2Q6VAB6 950 aa12.87□□□□□ -0.35
HDLBP-228ENST00000459788 LARGE2Q8N3Y3 721 aa12.87□□□□□ -0.35
HDLBP-228ENST00000459788 MPNDQ8N594 471 aa12.87□□□□□ -0.35
HDLBP-228ENST00000459788 METTL22Q9BUU2 404 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms