RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 TCIRG1Q13488 830 aa20.96■□□□□ 0.95
CPSF6-203ENST00000456847 PLBD2Q8NHP8 589 aa20.96■□□□□ 0.95
CPSF6-203ENST00000456847 DICER1Q9UPY3 1922 aaKnown RBP20.96■□□□□ 0.95
CPSF6-203ENST00000456847 ALDH1B1P30837 517 aa20.95■□□□□ 0.94
CPSF6-203ENST00000456847 ANKRD13DQ6ZTN6 518 aa20.95■□□□□ 0.94
CPSF6-203ENST00000456847 CHMP4AQ9BY43 222 aa20.95■□□□□ 0.94
CPSF6-203ENST00000456847 TAOK3Q9H2K8 898 aa20.95■□□□□ 0.94
CPSF6-203ENST00000456847 LAMB2P55268 1798 aa20.94■□□□□ 0.94
CPSF6-203ENST00000456847 IL16Q14005 1332 aa20.94■□□□□ 0.94
CPSF6-203ENST00000456847 NCBP3Q53F19 620 aaKnown RBP20.94■□□□□ 0.94
CPSF6-203ENST00000456847 CCDC93Q567U6 631 aa20.94■□□□□ 0.94
CPSF6-203ENST00000456847 NLRP10Q86W26 655 aa20.94■□□□□ 0.94
CPSF6-203ENST00000456847 RNF123Q5XPI4 1314 aa20.94■□□□□ 0.94
CPSF6-203ENST00000456847 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
CPSF6-203ENST00000456847 CCDC30Q5VVM6 783 aa20.94■□□□□ 0.94
CPSF6-203ENST00000456847 KDM2BQ8NHM5 1336 aa20.93■□□□□ 0.94
CPSF6-203ENST00000456847 ZC3H4Q9UPT8 1303 aaKnown RBP20.93■□□□□ 0.94
CPSF6-203ENST00000456847 PRELPP51888 382 aa20.93■□□□□ 0.94
CPSF6-203ENST00000456847 CRY2Q49AN0 593 aa20.93■□□□□ 0.94
CPSF6-203ENST00000456847 TSPYL6Q8N831 410 aa20.92■□□□□ 0.94
CPSF6-203ENST00000456847 TRMT112Q9UI30 125 aaKnown RBP20.92■□□□□ 0.94
CPSF6-203ENST00000456847 LTBP3Q9NS15 1303 aa20.92■□□□□ 0.94
CPSF6-203ENST00000456847 RIC3Q7Z5B4 369 aa20.92■□□□□ 0.94
CPSF6-203ENST00000456847 RBM17Q96I25 401 aaKnown RBP20.92■□□□□ 0.94
CPSF6-203ENST00000456847 NLRP3Q96P20 1036 aa20.92■□□□□ 0.94
CPSF6-203ENST00000456847 ZNF428Q96B54 188 aa20.91■□□□□ 0.94
CPSF6-203ENST00000456847 PHAXQ9H814 394 aaKnown RBP20.91■□□□□ 0.94
CPSF6-203ENST00000456847 NMRK2Q9NPI5 230 aa20.91■□□□□ 0.94
CPSF6-203ENST00000456847 KIF3CO14782 793 aa20.9■□□□□ 0.94
CPSF6-203ENST00000456847 SH3TC1Q8TE82 1336 aa20.9■□□□□ 0.94
CPSF6-203ENST00000456847 ATP5J2-PTCD1G3V325 749 aa20.9■□□□□ 0.94
CPSF6-203ENST00000456847 TWISTNBQ3B726 338 aaPredicted RBP20.9■□□□□ 0.94
CPSF6-203ENST00000456847 WDR63Q8IWG1 891 aa20.9■□□□□ 0.94
CPSF6-203ENST00000456847 C7orf43Q8WVR3 580 aa20.9■□□□□ 0.94
CPSF6-203ENST00000456847 STK31Q9BXU1 1019 aa20.9■□□□□ 0.94
CPSF6-203ENST00000456847 FANCIQ9NVI1 1328 aa20.89■□□□□ 0.94
CPSF6-203ENST00000456847 C3orf67Q6ZVT6 689 aa20.89■□□□□ 0.93
CPSF6-203ENST00000456847 DDX60Q8IY21 1712 aaKnown RBP20.89■□□□□ 0.93
CPSF6-203ENST00000456847 HCLS1P14317 486 aaPredicted RBP20.88■□□□□ 0.93
CPSF6-203ENST00000456847 SLC10A5Q5PT55 438 aa20.88■□□□□ 0.93
CPSF6-203ENST00000456847 OLFM4Q6UX06 510 aa20.88■□□□□ 0.93
CPSF6-203ENST00000456847 DDX58O95786 925 aaKnown RBP20.88■□□□□ 0.93
CPSF6-203ENST00000456847 HOXA10P31260 410 aaPredicted RBP20.88■□□□□ 0.93
CPSF6-203ENST00000456847 RTKN2Q8IZC4 609 aa20.88■□□□□ 0.93
CPSF6-203ENST00000456847 ISCA1Q9BUE6 129 aa20.88■□□□□ 0.93
CPSF6-203ENST00000456847 TCERG1O14776 1098 aaKnown RBP20.87■□□□□ 0.93
CPSF6-203ENST00000456847 FKBP4Q02790 459 aaKnown RBP eCLIP20.87■□□□□ 0.93
CPSF6-203ENST00000456847 C16orf71Q8IYS4 520 aaPredicted RBP20.87■□□□□ 0.93
CPSF6-203ENST00000456847 CRAMP1Q96RY5 1269 aa20.87■□□□□ 0.93
CPSF6-203ENST00000456847 PPEF1O14829 653 aaPredicted RBP20.86■□□□□ 0.93
CPSF6-203ENST00000456847 SYNE4Q8N205 404 aa20.86■□□□□ 0.93
CPSF6-203ENST00000456847 MYD88Q99836 296 aa20.86■□□□□ 0.93
CPSF6-203ENST00000456847 RRAGCQ9HB90 399 aa20.85■□□□□ 0.93
CPSF6-203ENST00000456847 GLTPD2A6NH11 291 aa20.84■□□□□ 0.93
CPSF6-203ENST00000456847 CC2D2BQ6DHV5 1058 aa20.84■□□□□ 0.93
CPSF6-203ENST00000456847 TMX4Q9H1E5 349 aaPredicted RBP20.84■□□□□ 0.93
CPSF6-203ENST00000456847 ZNF277Q9NRM2 450 aaPredicted RBP20.84■□□□□ 0.93
CPSF6-203ENST00000456847 RTL5Q5HYW3 569 aaPredicted RBP20.84■□□□□ 0.93
CPSF6-203ENST00000456847 DPY19L2Q6NUT2 758 aa20.84■□□□□ 0.93
CPSF6-203ENST00000456847 FAM89AQ96GI7 184 aa20.84■□□□□ 0.93
CPSF6-203ENST00000456847 ABCC4O15439 1325 aa20.83■□□□□ 0.93
CPSF6-203ENST00000456847 CACNA1FO60840 1977 aa20.83■□□□□ 0.93
CPSF6-203ENST00000456847 MYH16Q9H6N6 1097 aa20.83■□□□□ 0.93
CPSF6-203ENST00000456847 DDX46Q7L014 1031 aaKnown RBP20.82■□□□□ 0.92
CPSF6-203ENST00000456847 TOMM70O94826 608 aa20.82■□□□□ 0.92
CPSF6-203ENST00000456847 EXOSC9Q06265 439 aaKnown RBP20.82■□□□□ 0.92
CPSF6-203ENST00000456847 TRIM28Q13263 835 aaKnown RBP20.82■□□□□ 0.92
CPSF6-203ENST00000456847 MAP3K2Q9Y2U5 619 aa20.82■□□□□ 0.92
CPSF6-203ENST00000456847 TAF1P21675 1872 aa20.82■□□□□ 0.92
CPSF6-203ENST00000456847 WDR90Q96KV7 1748 aa20.81■□□□□ 0.92
CPSF6-203ENST00000456847 IARSP41252 1262 aaKnown RBP20.81■□□□□ 0.92
CPSF6-203ENST00000456847 METTL22Q9BUU2 404 aaPredicted RBP20.81■□□□□ 0.92
CPSF6-203ENST00000456847 SNED1Q8TER0 1413 aa20.81■□□□□ 0.92
CPSF6-203ENST00000456847 SLC4A2P04920 1241 aa20.8■□□□□ 0.92
CPSF6-203ENST00000456847 IRS4O14654 1257 aaPredicted RBP20.8■□□□□ 0.92
CPSF6-203ENST00000456847 GRIPAP1Q4V328 841 aa20.8■□□□□ 0.92
CPSF6-203ENST00000456847 KSR2Q6VAB6 950 aa20.8■□□□□ 0.92
CPSF6-203ENST00000456847 PSMD1Q99460 953 aa20.8■□□□□ 0.92
CPSF6-203ENST00000456847 SPINK5Q9NQ38 1064 aaPredicted RBP20.8■□□□□ 0.92
CPSF6-203ENST00000456847 CWC25Q9NXE8 425 aaPredicted RBP20.8■□□□□ 0.92
CPSF6-203ENST00000456847 PI4KAP2A4QPH2 592 aa20.79■□□□□ 0.92
CPSF6-203ENST00000456847 PI4KAP1Q8N8J0 262 aa20.79■□□□□ 0.92
CPSF6-203ENST00000456847 CCDC191Q8NCU4 936 aa20.79■□□□□ 0.92
CPSF6-203ENST00000456847 NEXNQ0ZGT2 675 aa20.78■□□□□ 0.92
CPSF6-203ENST00000456847 GRAPQ13588 217 aa20.78■□□□□ 0.92
CPSF6-203ENST00000456847 G2E3Q7L622 706 aa20.78■□□□□ 0.92
CPSF6-203ENST00000456847 SLC51AQ86UW1 340 aa20.78■□□□□ 0.92
CPSF6-203ENST00000456847 ZBTB38Q8NAP3 1195 aaPredicted RBP20.78■□□□□ 0.92
CPSF6-203ENST00000456847 GRAPLQ8TC17 118 aaPredicted RBP20.78■□□□□ 0.92
CPSF6-203ENST00000456847 ATP6V0A2Q9Y487 856 aa20.78■□□□□ 0.92
CPSF6-203ENST00000456847 VAMP4O75379 141 aa20.77■□□□□ 0.92
CPSF6-203ENST00000456847 BBOX1O75936 387 aa20.77■□□□□ 0.92
CPSF6-203ENST00000456847 HSP90B1P14625 803 aaKnown RBP20.77■□□□□ 0.92
CPSF6-203ENST00000456847 VEGFAP15692 232 aaPredicted RBP20.77■□□□□ 0.92
CPSF6-203ENST00000456847 RBM46Q8TBY0 533 aaKnown RBP20.77■□□□□ 0.92
CPSF6-203ENST00000456847 FLIIQ13045 1269 aa20.76■□□□□ 0.91
CPSF6-203ENST00000456847 DDNO94850 711 aaPredicted RBP20.76■□□□□ 0.91
CPSF6-203ENST00000456847 PCCAP05165 728 aaPredicted RBP20.76■□□□□ 0.91
CPSF6-203ENST00000456847 HSPA6P17066 643 aa20.76■□□□□ 0.91
CPSF6-203ENST00000456847 FKBP5Q13451 457 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms