RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 IFT74Q96LB3 600 aa5.74□□□□□ -1.49
PCDH9-203ENST00000456367 TTC14Q96N46 770 aa5.74□□□□□ -1.49
PCDH9-203ENST00000456367 CLSTN2Q9H4D0 955 aa5.74□□□□□ -1.49
PCDH9-203ENST00000456367 TMEM63CQ9P1W3 806 aa5.74□□□□□ -1.49
PCDH9-203ENST00000456367 JRKLQ9Y4A0 524 aa5.74□□□□□ -1.49
PCDH9-203ENST00000456367 ARHGAP6O43182 974 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 VAV2P52735 878 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 RBBP5Q15291 538 aaKnown RBP5.73□□□□□ -1.49
PCDH9-203ENST00000456367 SPECC1Q5M775 1068 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 VPS53Q5VIR6 699 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 MAATS1Q7Z4T9 603 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 RPAINQ86UA6 219 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 AOPEPQ8N6M6 819 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 SLC12A5Q9H2X9 1139 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 TFIP11Q9UBB9 837 aaKnown RBP5.73□□□□□ -1.49
PCDH9-203ENST00000456367 KRT86O43790 486 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 BMP15O95972 392 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 PDE1AP54750 535 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 CHMP4BP1P59074 171 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 LACTBP83111 547 aaPredicted RBP5.73□□□□□ -1.49
PCDH9-203ENST00000456367 LMOD2Q6P5Q4 547 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 RIC3Q7Z5B4 369 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 FAM71BQ8TC56 605 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 MIPOL1Q8TD10 442 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 MRFAP1L1Q96HT8 127 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 TTF2Q9UNY4 1162 aaKnown RBP5.73□□□□□ -1.49
PCDH9-203ENST00000456367 NDUFAB1O14561 156 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 ACTN2P35609 894 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 DNM1Q05193 864 aaKnown RBP5.73□□□□□ -1.49
PCDH9-203ENST00000456367 AACSQ86V21 672 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 FCHSD1Q86WN1 690 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 CCDC155Q8N6L0 562 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 KIAA1524Q8TCG1 905 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 CDK5RAP3Q96JB5 506 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 NEUROD6Q96NK8 337 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 ZNF692Q9BU19 519 aaPredicted RBP5.73□□□□□ -1.49
PCDH9-203ENST00000456367 DDX41Q9UJV9 622 aaKnown RBP5.73□□□□□ -1.49
PCDH9-203ENST00000456367 EXOC6BQ9Y2D4 811 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 RRP15Q9Y3B9 282 aaKnown RBP5.73□□□□□ -1.49
PCDH9-203ENST00000456367 EIF2AK4Q9P2K8 1649 aaKnown RBP5.73□□□□□ -1.49
PCDH9-203ENST00000456367 EPRSP07814 1512 aaKnown RBP5.73□□□□□ -1.49
PCDH9-203ENST00000456367 TACC1O75410 805 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 ERCC3P19447 782 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 HDGFL1Q5TGJ6 251 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 CNGA4Q8IV77 575 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 TTC5Q8N0Z6 440 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 PDLIM2Q96JY6 352 aa5.73□□□□□ -1.49
PCDH9-203ENST00000456367 PTPRGP23470 1445 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 TRIM14Q14142 442 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 UHRF1BP1Q6BDS2 1440 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 CACNA2D4Q7Z3S7 1137 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 ZGPATQ8N5A5 531 aaKnown RBP5.72□□□□□ -1.49
PCDH9-203ENST00000456367 RBM42Q9BTD8 480 aaKnown RBP5.72□□□□□ -1.49
PCDH9-203ENST00000456367 VEZTQ9HBM0 779 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 ECHDC1Q9NTX5 307 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 SPATS2LQ9NUQ6 558 aaKnown RBP5.72□□□□□ -1.49
PCDH9-203ENST00000456367 RMND1Q9NWS8 449 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 CEP83Q9Y592 693 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 AOX1Q06278 1338 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 MPHOSPH10O00566 681 aaKnown RBP5.72□□□□□ -1.49
PCDH9-203ENST00000456367 MAGEA9P43362 315 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 SYKP43405 635 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 HLTFQ14527 1009 aaKnown RBP eCLIP5.72□□□□□ -1.49
PCDH9-203ENST00000456367 MCTP2Q6DN12 878 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 NUP133Q8WUM0 1156 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 NACAP1Q9BZK3 213 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 KIF24Q5T7B8 1368 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 GOLGA6CA6NDK9 693 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 GOLGA6DP0CG33 693 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 CLEC17AQ6ZS10 378 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 FBF1Q8TES7 1133 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 RABGGTAQ92696 567 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 BAG1Q99933 345 aaPredicted RBP5.72□□□□□ -1.49
PCDH9-203ENST00000456367 BMP2KQ9NSY1 1161 aaPredicted RBP5.72□□□□□ -1.49
PCDH9-203ENST00000456367 GOLGA6AQ9NYA3 693 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 SSH2Q76I76 1423 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 FAM177BA6PVY3 158 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 SMARCA5O60264 1052 aaPredicted RBP5.72□□□□□ -1.49
PCDH9-203ENST00000456367 PPFIA4O75335 1185 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 FAM160A1Q05DH4 1040 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 NEDD9Q14511 834 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 CFAP58Q5T655 872 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 CARD6Q9BX69 1037 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 VCXQ9H320 206 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 CBX8Q9HC52 389 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 CABP2Q9NPB3 220 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 JADE2Q9NQC1 790 aa5.72□□□□□ -1.49
PCDH9-203ENST00000456367 KIF3CO14782 793 aa5.71□□□□□ -1.49
PCDH9-203ENST00000456367 GIGYF1O75420 1035 aaPredicted RBP5.71□□□□□ -1.49
PCDH9-203ENST00000456367 LUC7L3O95232 432 aaKnown RBP5.71□□□□□ -1.49
PCDH9-203ENST00000456367 CETN2P41208 172 aa5.71□□□□□ -1.49
PCDH9-203ENST00000456367 ETF1P62495 437 aaKnown RBP5.71□□□□□ -1.49
PCDH9-203ENST00000456367 MYL5Q02045 173 aa5.71□□□□□ -1.49
PCDH9-203ENST00000456367 CCDC6Q16204 474 aa5.71□□□□□ -1.49
PCDH9-203ENST00000456367 SH2D4BQ5SQS7 431 aa5.71□□□□□ -1.49
PCDH9-203ENST00000456367 CPLX4Q7Z7G2 160 aa5.71□□□□□ -1.49
PCDH9-203ENST00000456367 PLEKHM2Q8IWE5 1019 aa5.71□□□□□ -1.49
PCDH9-203ENST00000456367 SCLT1Q96NL6 688 aa5.71□□□□□ -1.49
PCDH9-203ENST00000456367 NAPGQ99747 312 aaPredicted RBP5.71□□□□□ -1.49
PCDH9-203ENST00000456367 TSGA10Q9BZW7 698 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 470 ms