RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ZGPATQ8N5A5 531 aaKnown RBP12.1□□□□□ -0.47
CTC1-202ENST00000449476 CNNM3Q8NE01 707 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 KIF18AQ8NI77 898 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 ERLIN1O75477 346 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTC1-202ENST00000449476 TTF1Q15361 905 aaPredicted RBP12.1□□□□□ -0.47
CTC1-202ENST00000449476 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
CTC1-202ENST00000449476 NCOA7Q8NI08 942 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 ZSCAN16Q9H4T2 348 aaPredicted RBP12.1□□□□□ -0.47
CTC1-202ENST00000449476 INSRP06213 1382 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 TOP1P11387 765 aaKnown RBP12.1□□□□□ -0.47
CTC1-202ENST00000449476 IL13P35225 146 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 G2E3Q7L622 706 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 USP26Q9BXU7 913 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 CWC15Q9P013 229 aaKnown RBP12.1□□□□□ -0.47
CTC1-202ENST00000449476 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
CTC1-202ENST00000449476 BLMP54132 1417 aaPredicted RBP12.09□□□□□ -0.47
CTC1-202ENST00000449476 CWF19L2Q2TBE0 894 aaKnown RBP12.09□□□□□ -0.47
CTC1-202ENST00000449476 TMEM67Q5HYA8 995 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 CCDC181Q5TID7 509 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 ADAMTS2O95450 1211 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 CHMLP26374 656 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 PIP4K2BP78356 416 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 STX1AQ16623 288 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 CCDC144CPQ8IYA2 1237 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 C16orf45Q96MC5 204 aaPredicted RBP12.09□□□□□ -0.47
CTC1-202ENST00000449476 PHAXQ9H814 394 aaKnown RBP12.09□□□□□ -0.47
CTC1-202ENST00000449476 ZNF287Q9HBT7 754 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 TTC41PQ6P2S7 1318 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 ABCA5Q8WWZ7 1642 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 PATL2C9JE40 543 aaKnown RBP12.09□□□□□ -0.47
CTC1-202ENST00000449476 TNNT1P13805 278 aa12.09□□□□□ -0.47
CTC1-202ENST00000449476 MAP3K5Q99683 1374 aa12.08□□□□□ -0.48
CTC1-202ENST00000449476 ZSCAN12O43309 604 aa12.08□□□□□ -0.48
CTC1-202ENST00000449476 ZPR1O75312 459 aa12.08□□□□□ -0.48
CTC1-202ENST00000449476 DZIP1Q86YF9 867 aaKnown RBP12.08□□□□□ -0.48
CTC1-202ENST00000449476 TRMT1Q9NXH9 659 aaKnown RBP12.08□□□□□ -0.48
CTC1-202ENST00000449476 PTPRTO14522 1441 aa12.08□□□□□ -0.48
CTC1-202ENST00000449476 CAVIN2O95810 425 aa12.08□□□□□ -0.48
CTC1-202ENST00000449476 MCMDC2Q4G0Z9 681 aa12.08□□□□□ -0.48
CTC1-202ENST00000449476 F13A1P00488 732 aa12.08□□□□□ -0.48
CTC1-202ENST00000449476 RBM25P49756 843 aaKnown RBP12.08□□□□□ -0.48
CTC1-202ENST00000449476 METAP2P50579 478 aaKnown RBP eCLIP12.08□□□□□ -0.48
CTC1-202ENST00000449476 SYCP1Q15431 976 aa12.08□□□□□ -0.48
CTC1-202ENST00000449476 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
CTC1-202ENST00000449476 PRM3Q9NNZ6 103 aa12.08□□□□□ -0.48
CTC1-202ENST00000449476 KLF18A0A0U1RQI7 1052 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 DNM1Q05193 864 aaKnown RBP12.07□□□□□ -0.48
CTC1-202ENST00000449476 NMIQ13287 307 aaPredicted RBP12.07□□□□□ -0.48
CTC1-202ENST00000449476 MSH6P52701 1360 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 NEMFO60524 1076 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 MYO6Q9UM54 1294 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 URI1O94763 535 aaPredicted RBP12.07□□□□□ -0.48
CTC1-202ENST00000449476 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
CTC1-202ENST00000449476 AK2P54819 239 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 SKIDA1Q1XH10 827 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 LEKR1Q6ZMV7 388 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 TXLNBQ8N3L3 684 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 ZCRB1Q8TBF4 217 aaKnown RBP12.07□□□□□ -0.48
CTC1-202ENST00000449476 ZFYP08048 801 aaPredicted RBP12.07□□□□□ -0.48
CTC1-202ENST00000449476 HOXC9P31274 260 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 IL15P40933 162 aaPredicted RBP12.07□□□□□ -0.48
CTC1-202ENST00000449476 CATIPQ7Z7H3 387 aa12.07□□□□□ -0.48
CTC1-202ENST00000449476 CHL1O00533 1208 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 CLCN1P35523 988 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 ANKIB1Q9P2G1 1089 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 EIF3JO75822 258 aaKnown RBP12.06□□□□□ -0.48
CTC1-202ENST00000449476 GCP02774 474 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 MFSD6Q6ZSS7 791 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 KIAA1328Q86T90 577 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 ZNF444Q8N0Y2 327 aaPredicted RBP12.06□□□□□ -0.48
CTC1-202ENST00000449476 GSDMDP57764 484 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 ATP2B3Q16720 1220 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 Q6ZUG5 572 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 INTS4Q96HW7 963 aaKnown RBP12.06□□□□□ -0.48
CTC1-202ENST00000449476 DACT1Q9NYF0 836 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 SEC63Q9UGP8 760 aaKnown RBP12.06□□□□□ -0.48
CTC1-202ENST00000449476 KCNA6P17658 529 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 NLRP5P59047 1200 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 ISM2Q6H9L7 571 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
CTC1-202ENST00000449476 ATP7AQ04656 1500 aa12.06□□□□□ -0.48
CTC1-202ENST00000449476 TMC6Q7Z403 805 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 SLC26A6Q9BXS9 759 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 GCC2Q8IWJ2 1684 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 ZMYM3Q14202 1370 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 CCDC194A0A1B0GVG4 234 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 UQCRFS1P1P0C7P4 283 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 CCDC102BQ68D86 513 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 EDC4Q6P2E9 1401 aaKnown RBP12.05□□□□□ -0.48
CTC1-202ENST00000449476 NPHP3Q7Z494 1330 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 H0YHG0 523 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 TMCO3Q6UWJ1 677 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 FAM200AQ8TCP9 573 aa12.05□□□□□ -0.48
CTC1-202ENST00000449476 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
CTC1-202ENST00000449476 CREB3L3Q68CJ9 461 aa12.04□□□□□ -0.48
CTC1-202ENST00000449476 CPLX3Q8WVH0 158 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms