RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 ZNF790Q6PG37 636 aa6.53□□□□□ -1.36
LMO3-209ENST00000447609 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.53□□□□□ -1.36
LMO3-209ENST00000447609 COL5A2P05997 1499 aaPredicted RBP6.53□□□□□ -1.36
LMO3-209ENST00000447609 ALDH1L2Q3SY69 923 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 TBC1D9Q6ZT07 1266 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 TIGD1Q96MW7 591 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 C9orf78Q9NZ63 289 aaPredicted RBP6.52□□□□□ -1.37
LMO3-209ENST00000447609 PSDA5PKW4 1024 aaPredicted RBP6.52□□□□□ -1.37
LMO3-209ENST00000447609 G3V3G9 751 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 MKRN4PQ13434 485 aaPredicted RBP6.52□□□□□ -1.37
LMO3-209ENST00000447609 OS9Q13438 667 aaPredicted RBP6.52□□□□□ -1.37
LMO3-209ENST00000447609 TXNRD1Q16881 649 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 DCAF8Q5TAQ9 597 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 IL17REQ8NFR9 667 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 PIGBQ92521 554 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 SPTLC3Q9NUV7 552 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 IFT57Q9NWB7 429 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 XIRP1Q702N8 1843 aaKnown RBP6.52□□□□□ -1.37
LMO3-209ENST00000447609 A0A087WZG4 1122 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 ANXA1P04083 346 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 CYP2E1P05181 493 aaPredicted RBP6.52□□□□□ -1.37
LMO3-209ENST00000447609 CCDC125Q86Z20 511 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 ZBTB3Q9H5J0 574 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 TBC1D2BQ9UPU7 963 aa6.52□□□□□ -1.37
LMO3-209ENST00000447609 CAMTA1Q9Y6Y1 1673 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 ZNF496Q96IT1 587 aaPredicted RBP6.51□□□□□ -1.37
LMO3-209ENST00000447609 ZBTB40Q9NUA8 1239 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 HDAC5Q9UQL6 1122 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 TRIM27P14373 513 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 SLC20A2Q08357 652 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 EZH2Q15910 746 aaKnown RBP6.51□□□□□ -1.37
LMO3-209ENST00000447609 RNF20Q5VTR2 975 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 RNF214Q8ND24 703 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 BCL2L12Q9HB09 334 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 ATP6V1DQ9Y5K8 247 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 GPTP24298 496 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 WWC3Q9ULE0 1092 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 PALLDQ8WX93 1383 aa6.51□□□□□ -1.37
LMO3-209ENST00000447609 USP32Q8NFA0 1604 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 R3HDM1Q15032 1099 aaKnown RBP6.5□□□□□ -1.37
LMO3-209ENST00000447609 CCDC183Q5T5S1 534 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 MSL1Q68DK7 614 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 FLAD1Q8NFF5 587 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 MBIPQ9NS73 344 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 CCDC87Q9NVE4 849 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 DBF4Q9UBU7 674 aaPredicted RBP6.5□□□□□ -1.37
LMO3-209ENST00000447609 PAXBP1Q9Y5B6 917 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 A1BGP04217 495 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 DZIP3Q86Y13 1208 aaKnown RBP6.5□□□□□ -1.37
LMO3-209ENST00000447609 KIF2CQ99661 725 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 USP25Q9UHP3 1055 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 PARP3Q9Y6F1 533 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 LRP6O75581 1613 aa6.5□□□□□ -1.37
LMO3-209ENST00000447609 KCNQ3O43525 872 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 KRT222Q8N1A0 295 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 TMEM57Q8N5G2 664 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 ANKRD7Q92527 254 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 API5Q9BZZ5 524 aaKnown RBP6.49□□□□□ -1.37
LMO3-209ENST00000447609 TMEM63CQ9P1W3 806 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 MYOM1P52179 1685 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 WDR33Q9C0J8 1336 aaKnown RBP6.49□□□□□ -1.37
LMO3-209ENST00000447609 COL16A1Q07092 1604 aaPredicted RBP6.49□□□□□ -1.37
LMO3-209ENST00000447609 HSP90B1P14625 803 aaKnown RBP6.49□□□□□ -1.37
LMO3-209ENST00000447609 GPT2Q8TD30 523 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 RBM27Q9P2N5 1060 aaKnown RBP6.49□□□□□ -1.37
LMO3-209ENST00000447609 NOB1Q9ULX3 412 aaKnown RBP6.49□□□□□ -1.37
LMO3-209ENST00000447609 SMTNL1A8MU46 457 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 ADCY5O95622 1261 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 KRT24Q2M2I5 525 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 ARHGAP45Q92619 1136 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 INTS4Q96HW7 963 aaKnown RBP6.49□□□□□ -1.37
LMO3-209ENST00000447609 SETDB2Q96T68 719 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 HYPKQ9NX55 129 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 BCL9LQ86UU0 1499 aa6.49□□□□□ -1.37
LMO3-209ENST00000447609 HSP90AB3PQ58FF7 597 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 TEX35Q5T0J7 233 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 COPS6Q7L5N1 327 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 NBPF5PQ86XG9 351 aaPredicted RBP6.48□□□□□ -1.37
LMO3-209ENST00000447609 ZNF710Q8N1W2 664 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 SSH1Q8WYL5 1049 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 ATG3Q9NT62 314 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.48□□□□□ -1.37
LMO3-209ENST00000447609 SPDYE4A6NLX3 237 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 ZBTB7AO95365 584 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 KCNJ4P48050 445 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 ATP2B3Q16720 1220 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 CCDC112Q8NEF3 446 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 XAGE3Q8WTP9 111 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 TMEM51Q9NW97 253 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 RGS17Q9UGC6 210 aaPredicted RBP6.48□□□□□ -1.37
LMO3-209ENST00000447609 TNNQ9UQP3 1299 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 USP16Q9Y5T5 823 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 SLIT2O94813 1529 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 CTIFO43310 598 aaKnown RBP6.48□□□□□ -1.37
LMO3-209ENST00000447609 TNNT3P45378 269 aaPredicted RBP6.48□□□□□ -1.37
LMO3-209ENST00000447609 CRKLP46109 303 aaKnown RBP6.48□□□□□ -1.37
LMO3-209ENST00000447609 SLC27A3Q5K4L6 730 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 MYD88Q99836 296 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 CHPF2Q9P2E5 772 aa6.48□□□□□ -1.37
LMO3-209ENST00000447609 NIP7Q9Y221 180 aaKnown RBP eCLIP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms