RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SYTL4Q96C24 671 aaPredicted RBP21.26■□□□□ 0.99
SMC6-206ENST00000446852 PALD1Q9ULE6 856 aa21.26■□□□□ 0.99
SMC6-206ENST00000446852 STARD3NLO95772 234 aa21.25■□□□□ 0.99
SMC6-206ENST00000446852 SGSM2O43147 1006 aa21.24■□□□□ 0.99
SMC6-206ENST00000446852 ISCA1Q9BUE6 129 aa21.24■□□□□ 0.99
SMC6-206ENST00000446852 CDCA7Q9BWT1 371 aaPredicted RBP21.24■□□□□ 0.99
SMC6-206ENST00000446852 ANKRD36CQ5JPF3 1778 aa21.24■□□□□ 0.99
SMC6-206ENST00000446852 PRIM1P49642 420 aaKnown RBP21.23■□□□□ 0.99
SMC6-206ENST00000446852 FOXD4L1Q9NU39 408 aa21.23■□□□□ 0.99
SMC6-206ENST00000446852 THRAP3Q9Y2W1 955 aaKnown RBP21.23■□□□□ 0.99
SMC6-206ENST00000446852 SLIT2O94813 1529 aa21.23■□□□□ 0.99
SMC6-206ENST00000446852 TOM1O60784 492 aa21.23■□□□□ 0.99
SMC6-206ENST00000446852 CYP19A1P11511 503 aaPredicted RBP21.22■□□□□ 0.99
SMC6-206ENST00000446852 TFCP2Q12800 502 aa21.22■□□□□ 0.99
SMC6-206ENST00000446852 TCIRG1Q13488 830 aa21.22■□□□□ 0.99
SMC6-206ENST00000446852 SPATA31A5Q5VU36 1347 aa21.22■□□□□ 0.99
SMC6-206ENST00000446852 SPATA31A7Q8IWB4 1347 aa21.22■□□□□ 0.99
SMC6-206ENST00000446852 HSP90AA1P07900 732 aaKnown RBP21.22■□□□□ 0.99
SMC6-206ENST00000446852 DDB1Q16531 1140 aa21.22■□□□□ 0.99
SMC6-206ENST00000446852 MCCP23508 829 aa21.21■□□□□ 0.99
SMC6-206ENST00000446852 CWC27Q6UX04 472 aaKnown RBP21.21■□□□□ 0.99
SMC6-206ENST00000446852 KIF6Q6ZMV9 814 aa21.21■□□□□ 0.99
SMC6-206ENST00000446852 CHMP3Q9Y3E7 222 aa21.21■□□□□ 0.99
SMC6-206ENST00000446852 NUP98P52948 1817 aa21.21■□□□□ 0.99
SMC6-206ENST00000446852 ST18O60284 1047 aa21.21■□□□□ 0.99
SMC6-206ENST00000446852 ANAPC15P60006 121 aa21.2■□□□□ 0.98
SMC6-206ENST00000446852 TNNI3KQ59H18 835 aa21.2■□□□□ 0.98
SMC6-206ENST00000446852 EVI5LQ96CN4 794 aa21.2■□□□□ 0.98
SMC6-206ENST00000446852 FPGT-TNNI3KV9GXZ4 949 aa21.2■□□□□ 0.98
SMC6-206ENST00000446852 RAD50Q92878 1312 aa21.2■□□□□ 0.98
SMC6-206ENST00000446852 EPB41L2O43491 1005 aaKnown RBP21.2■□□□□ 0.98
SMC6-206ENST00000446852 IL17RAQ96F46 866 aa21.2■□□□□ 0.98
SMC6-206ENST00000446852 DBNLQ9UJU6 430 aaKnown RBP21.2■□□□□ 0.98
SMC6-206ENST00000446852 LSG1Q9H089 658 aaKnown RBP21.19■□□□□ 0.98
SMC6-206ENST00000446852 CIZ1Q9ULV3 898 aaPredicted RBP21.19■□□□□ 0.98
SMC6-206ENST00000446852 ZBTB1Q9Y2K1 713 aa21.19■□□□□ 0.98
SMC6-206ENST00000446852 MAP3K15Q6ZN16 1313 aa21.19■□□□□ 0.98
SMC6-206ENST00000446852 TRIM28Q13263 835 aaKnown RBP21.19■□□□□ 0.98
SMC6-206ENST00000446852 MARCH10Q8NA82 808 aaPredicted RBP21.19■□□□□ 0.98
SMC6-206ENST00000446852 DIAPH3Q9NSV4 1193 aa21.19■□□□□ 0.98
SMC6-206ENST00000446852 HSPA4P34932 840 aa21.18■□□□□ 0.98
SMC6-206ENST00000446852 BOLA2Q9H3K6 86 aa21.18■□□□□ 0.98
SMC6-206ENST00000446852 NEK4P51957 841 aa21.18■□□□□ 0.98
SMC6-206ENST00000446852 ATG9AQ7Z3C6 839 aa21.18■□□□□ 0.98
SMC6-206ENST00000446852 HLFQ16534 295 aa21.17■□□□□ 0.98
SMC6-206ENST00000446852 ARXQ96QS3 562 aa21.17■□□□□ 0.98
SMC6-206ENST00000446852 GIGYF2Q6Y7W6 1299 aaKnown RBP21.17■□□□□ 0.98
SMC6-206ENST00000446852 ACSBG1Q96GR2 724 aa21.16■□□□□ 0.98
SMC6-206ENST00000446852 CCDC9Q9Y3X0 531 aaKnown RBP21.16■□□□□ 0.98
SMC6-206ENST00000446852 MYH3P11055 1940 aa21.15■□□□□ 0.98
SMC6-206ENST00000446852 ZNF594Q96JF6 807 aaPredicted RBP21.15■□□□□ 0.98
SMC6-206ENST00000446852 MCM4P33991 863 aa21.15■□□□□ 0.98
SMC6-206ENST00000446852 BARGINQ6ZT62 677 aa21.15■□□□□ 0.98
SMC6-206ENST00000446852 FAM89AQ96GI7 184 aa21.15■□□□□ 0.98
SMC6-206ENST00000446852 DBNDD2Q9BQY9 259 aa21.15■□□□□ 0.98
SMC6-206ENST00000446852 PCCAP05165 728 aaPredicted RBP21.14■□□□□ 0.98
SMC6-206ENST00000446852 RAB3GAP1Q15042 981 aa21.14■□□□□ 0.98
SMC6-206ENST00000446852 RUFY2Q8WXA3 655 aa21.14■□□□□ 0.98
SMC6-206ENST00000446852 A0A0G2JS52 829 aa21.14■□□□□ 0.97
SMC6-206ENST00000446852 UBAP1LF5GYI3 381 aa21.14■□□□□ 0.97
SMC6-206ENST00000446852 ATP5JP18859 108 aa21.14■□□□□ 0.97
SMC6-206ENST00000446852 LRRC24Q50LG9 513 aa21.13■□□□□ 0.97
SMC6-206ENST00000446852 TNPO1Q92973 898 aaKnown RBP21.13■□□□□ 0.97
SMC6-206ENST00000446852 FAM227BQ96M60 508 aa21.13■□□□□ 0.97
SMC6-206ENST00000446852 CICQ96RK0 1608 aaPredicted RBP21.13■□□□□ 0.97
SMC6-206ENST00000446852 RREB1Q92766 1687 aa21.13■□□□□ 0.97
SMC6-206ENST00000446852 MYH14Q7Z406 1995 aaKnown RBP21.13■□□□□ 0.97
SMC6-206ENST00000446852 GPTP24298 496 aa21.13■□□□□ 0.97
SMC6-206ENST00000446852 KIAA1211Q6ZU35 1233 aa21.13■□□□□ 0.97
SMC6-206ENST00000446852 ZBTB38Q8NAP3 1195 aaPredicted RBP21.13■□□□□ 0.97
SMC6-206ENST00000446852 EDC3Q96F86 508 aaKnown RBP21.13■□□□□ 0.97
SMC6-206ENST00000446852 UPF3BQ9BZI7 483 aaKnown RBP21.13■□□□□ 0.97
SMC6-206ENST00000446852 PTH1RQ03431 593 aa21.12■□□□□ 0.97
SMC6-206ENST00000446852 NMIQ13287 307 aaPredicted RBP21.12■□□□□ 0.97
SMC6-206ENST00000446852 NLRP10Q86W26 655 aa21.12■□□□□ 0.97
SMC6-206ENST00000446852 EYA2O00167 538 aa21.12■□□□□ 0.97
SMC6-206ENST00000446852 IL6STP40189 918 aaPredicted RBP21.12■□□□□ 0.97
SMC6-206ENST00000446852 IL15P40933 162 aaPredicted RBP21.12■□□□□ 0.97
SMC6-206ENST00000446852 SYNE4Q8N205 404 aa21.12■□□□□ 0.97
SMC6-206ENST00000446852 FSD1Q9BTV5 496 aa21.12■□□□□ 0.97
SMC6-206ENST00000446852 SNX14Q9Y5W7 946 aa21.12■□□□□ 0.97
SMC6-206ENST00000446852 GSE1Q14687 1217 aa21.11■□□□□ 0.97
SMC6-206ENST00000446852 RASEFQ8IZ41 740 aa21.11■□□□□ 0.97
SMC6-206ENST00000446852 PLA2G12BQ9BX93 195 aa21.11■□□□□ 0.97
SMC6-206ENST00000446852 PUS3Q9BZE2 481 aaKnown RBP21.11■□□□□ 0.97
SMC6-206ENST00000446852 HIP1O00291 1037 aa21.11■□□□□ 0.97
SMC6-206ENST00000446852 ZNF609O15014 1411 aa21.11■□□□□ 0.97
SMC6-206ENST00000446852 NDUFB9Q9Y6M9 179 aa21.11■□□□□ 0.97
SMC6-206ENST00000446852 BCL9LQ86UU0 1499 aa21.1■□□□□ 0.97
SMC6-206ENST00000446852 A0A0D9SFI3 127 aa21.1■□□□□ 0.97
SMC6-206ENST00000446852 ZGPATQ8N5A5 531 aaKnown RBP21.1■□□□□ 0.97
SMC6-206ENST00000446852 TBC1D2BQ9UPU7 963 aa21.1■□□□□ 0.97
SMC6-206ENST00000446852 CIAO1O76071 339 aa21.1■□□□□ 0.97
SMC6-206ENST00000446852 TMX3Q96JJ7 454 aa21.1■□□□□ 0.97
SMC6-206ENST00000446852 HSP90AB3PQ58FF7 597 aa21.09■□□□□ 0.97
SMC6-206ENST00000446852 DZIP3Q86Y13 1208 aaKnown RBP21.09■□□□□ 0.97
SMC6-206ENST00000446852 CCDC85AQ96PX6 553 aaPredicted RBP21.09■□□□□ 0.97
SMC6-206ENST00000446852 GPR108Q9NPR9 543 aa21.09■□□□□ 0.97
SMC6-206ENST00000446852 SNRKQ9NRH2 765 aa21.09■□□□□ 0.97
SMC6-206ENST00000446852 CCDC171Q6TFL3 1326 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms