RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SETD1BQ9UPS6 1966 aaKnown RBP12.55□□□□□ -0.4
TOP3B-210ENST00000444502 KIAA1210Q9ULL0 1709 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 ANKRD18BA2A2Z9 1011 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 GRM8O00222 908 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 BRPF1P55201 1214 aaPredicted RBP12.55□□□□□ -0.4
TOP3B-210ENST00000444502 FERMT3Q86UX7 667 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 DZIP3Q86Y13 1208 aaKnown RBP12.55□□□□□ -0.4
TOP3B-210ENST00000444502 USP44Q9H0E7 712 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 PSMA5P28066 241 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 IKQ13123 557 aaPredicted RBP12.55□□□□□ -0.4
TOP3B-210ENST00000444502 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 ARHGEF10O15013 1369 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 KIAA2012Q0VF49 1180 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 TCEANC2Q96MN5 208 aa12.55□□□□□ -0.4
TOP3B-210ENST00000444502 CD2BP2O95400 341 aaKnown RBP12.54□□□□□ -0.4
TOP3B-210ENST00000444502 DNAJC10Q8IXB1 793 aa12.54□□□□□ -0.4
TOP3B-210ENST00000444502 HELBQ8NG08 1087 aaPredicted RBP12.54□□□□□ -0.4
TOP3B-210ENST00000444502 CHMLP26374 656 aa12.54□□□□□ -0.4
TOP3B-210ENST00000444502 EIF4A1P60842 406 aaKnown RBP12.54□□□□□ -0.4
TOP3B-210ENST00000444502 BLOC1S2Q6QNY1 142 aa12.54□□□□□ -0.4
TOP3B-210ENST00000444502 BICD2Q8TD16 824 aa12.54□□□□□ -0.4
TOP3B-210ENST00000444502 RPGRQ92834 1020 aaKnown RBP12.54□□□□□ -0.4
TOP3B-210ENST00000444502 RBM27Q9P2N5 1060 aaKnown RBP12.54□□□□□ -0.4
TOP3B-210ENST00000444502 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
TOP3B-210ENST00000444502 LRRC7Q96NW7 1537 aa12.54□□□□□ -0.4
TOP3B-210ENST00000444502 CDK12Q9NYV4 1490 aaPredicted RBP12.54□□□□□ -0.4
TOP3B-210ENST00000444502 SYCE3A1L190 88 aa12.54□□□□□ -0.4
TOP3B-210ENST00000444502 ZSCAN29Q8IWY8 852 aaPredicted RBP12.54□□□□□ -0.4
TOP3B-210ENST00000444502 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
TOP3B-210ENST00000444502 TFCP2L1Q9NZI6 479 aa12.54□□□□□ -0.4
TOP3B-210ENST00000444502 HIP1O00291 1037 aa12.53□□□□□ -0.4
TOP3B-210ENST00000444502 MBD3O95983 291 aa12.53□□□□□ -0.4
TOP3B-210ENST00000444502 TDO2P48775 406 aa12.53□□□□□ -0.4
TOP3B-210ENST00000444502 FAM89AQ96GI7 184 aa12.53□□□□□ -0.4
TOP3B-210ENST00000444502 SOS1Q07889 1333 aaPredicted RBP12.53□□□□□ -0.4
TOP3B-210ENST00000444502 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
TOP3B-210ENST00000444502 CEBPZQ03701 1054 aaKnown RBP12.53□□□□□ -0.4
TOP3B-210ENST00000444502 ZNF622Q969S3 477 aaKnown RBP eCLIP12.53□□□□□ -0.46e-7■□□□□ 11.1
TOP3B-210ENST00000444502 GOLIM4O00461 696 aa12.53□□□□□ -0.4
TOP3B-210ENST00000444502 GNPATO15228 680 aa12.53□□□□□ -0.4
TOP3B-210ENST00000444502 ARHGEF25Q86VW2 580 aa12.53□□□□□ -0.4
TOP3B-210ENST00000444502 OFD1O75665 1012 aa12.52□□□□□ -0.4
TOP3B-210ENST00000444502 CPA1P15085 419 aa12.52□□□□□ -0.4
TOP3B-210ENST00000444502 LARP1BQ659C4 914 aaKnown RBP12.52□□□□□ -0.4
TOP3B-210ENST00000444502 LINS1Q8NG48 757 aa12.52□□□□□ -0.4
TOP3B-210ENST00000444502 RAB3GAP1Q15042 981 aa12.52□□□□□ -0.41
TOP3B-210ENST00000444502 SLC4A8Q2Y0W8 1093 aa12.52□□□□□ -0.41
TOP3B-210ENST00000444502 BRINP3Q76B58 766 aa12.52□□□□□ -0.41
TOP3B-210ENST00000444502 KCNQ4P56696 695 aa12.52□□□□□ -0.41
TOP3B-210ENST00000444502 SETDB2Q96T68 719 aa12.52□□□□□ -0.41
TOP3B-210ENST00000444502 CTDP1Q9Y5B0 961 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-210ENST00000444502 TSC1Q92574 1164 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 CPSF1Q10570 1443 aaKnown RBP12.51□□□□□ -0.41
TOP3B-210ENST00000444502 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
TOP3B-210ENST00000444502 PIBF1Q8WXW3 757 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 AIDAQ96BJ3 306 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 SLC52A2Q9HAB3 445 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
TOP3B-210ENST00000444502 USP16Q9Y5T5 823 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 MINDY4BA8MYZ0 360 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 CAVIN4Q5BKX8 364 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
TOP3B-210ENST00000444502 AKAP2Q9Y2D5 859 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 IQSEC2Q5JU85 1478 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 CPS1P31327 1500 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 PRAMEF22A3QJZ6 481 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 PPFIA3O75145 1194 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 DDX11Q96FC9 970 aa12.51□□□□□ -0.41
TOP3B-210ENST00000444502 CERS3Q8IU89 383 aa12.5□□□□□ -0.41
TOP3B-210ENST00000444502 NUP133Q8WUM0 1156 aa12.5□□□□□ -0.41
TOP3B-210ENST00000444502 ALDH1L1O75891 902 aa12.5□□□□□ -0.41
TOP3B-210ENST00000444502 NACAP1Q9BZK3 213 aa12.5□□□□□ -0.41
TOP3B-210ENST00000444502 RTCBQ9Y3I0 505 aaKnown RBP12.5□□□□□ -0.41
TOP3B-210ENST00000444502 CLTCQ00610 1675 aaKnown RBP12.5□□□□□ -0.41
TOP3B-210ENST00000444502 SART3Q15020 963 aaKnown RBP12.5□□□□□ -0.41
TOP3B-210ENST00000444502 BICC1Q9H694 974 aaKnown RBP12.5□□□□□ -0.41
TOP3B-210ENST00000444502 CCNL1Q9UK58 526 aaPredicted RBP12.5□□□□□ -0.41
TOP3B-210ENST00000444502 PROSER3Q2NL68 480 aa12.49□□□□□ -0.41
TOP3B-210ENST00000444502 NECAB1Q8N987 351 aa12.49□□□□□ -0.41
TOP3B-210ENST00000444502 LIMCH1Q9UPQ0 1083 aa12.49□□□□□ -0.41
TOP3B-210ENST00000444502 PPLO60437 1756 aa12.49□□□□□ -0.41
TOP3B-210ENST00000444502 ZBTB22O15209 634 aa12.49□□□□□ -0.41
TOP3B-210ENST00000444502 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
TOP3B-210ENST00000444502 EVI5LQ96CN4 794 aa12.49□□□□□ -0.41
TOP3B-210ENST00000444502 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
TOP3B-210ENST00000444502 IPO4Q8TEX9 1081 aaKnown RBP12.49□□□□□ -0.41
TOP3B-210ENST00000444502 CHAMP1Q96JM3 812 aa12.49□□□□□ -0.41
TOP3B-210ENST00000444502 UNC5CLQ8IV45 518 aa12.48□□□□□ -0.41
TOP3B-210ENST00000444502 JAG2Q9Y219 1238 aa12.48□□□□□ -0.41
TOP3B-210ENST00000444502 TSPY26PQ9H489 355 aa12.48□□□□□ -0.41
TOP3B-210ENST00000444502 MED14O60244 1454 aa12.48□□□□□ -0.41
TOP3B-210ENST00000444502 ZC3H13Q5T200 1668 aaKnown RBP12.48□□□□□ -0.41
TOP3B-210ENST00000444502 PHKG2P15735 406 aa12.48□□□□□ -0.41
TOP3B-210ENST00000444502 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
TOP3B-210ENST00000444502 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
TOP3B-210ENST00000444502 PKP1Q13835 747 aa12.48□□□□□ -0.41
TOP3B-210ENST00000444502 NLRP3Q96P20 1036 aa12.48□□□□□ -0.41
TOP3B-210ENST00000444502 PALD1Q9ULE6 856 aa12.48□□□□□ -0.41
TOP3B-210ENST00000444502 PTCH1Q13635 1447 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms