RNA–Protein interactions for RNA: ENST00000441298.5

ZNF3-209, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-209ENST00000441298 C8orf58Q8NAV2 365 aa16.54■□□□□ 0.24
ZNF3-209ENST00000441298 HYPKQ9NX55 129 aa16.54■□□□□ 0.24
ZNF3-209ENST00000441298 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
ZNF3-209ENST00000441298 TCERG1O14776 1098 aaKnown RBP16.53■□□□□ 0.24
ZNF3-209ENST00000441298 SOGA3Q5TF21 947 aa16.53■□□□□ 0.24
ZNF3-209ENST00000441298 KLRG2A4D1S0 409 aaPredicted RBP16.52■□□□□ 0.24
ZNF3-209ENST00000441298 KIF3CO14782 793 aa16.52■□□□□ 0.24
ZNF3-209ENST00000441298 GOLGA2Q08379 1002 aa16.52■□□□□ 0.24
ZNF3-209ENST00000441298 CCDC27Q2M243 656 aa16.52■□□□□ 0.24
ZNF3-209ENST00000441298 C3orf67Q6ZVT6 689 aa16.52■□□□□ 0.24
ZNF3-209ENST00000441298 NLRP10Q86W26 655 aa16.52■□□□□ 0.24
ZNF3-209ENST00000441298 C16orf71Q8IYS4 520 aaPredicted RBP16.52■□□□□ 0.24
ZNF3-209ENST00000441298 TSPYL6Q8N831 410 aa16.52■□□□□ 0.24
ZNF3-209ENST00000441298 PLBD2Q8NHP8 589 aa16.52■□□□□ 0.24
ZNF3-209ENST00000441298 ATP5J2-PTCD1G3V325 749 aa16.51■□□□□ 0.23
ZNF3-209ENST00000441298 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
ZNF3-209ENST00000441298 ALDH1B1P30837 517 aa16.51■□□□□ 0.23
ZNF3-209ENST00000441298 TCIRG1Q13488 830 aa16.51■□□□□ 0.23
ZNF3-209ENST00000441298 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
ZNF3-209ENST00000441298 ANKRD13DQ6ZTN6 518 aa16.51■□□□□ 0.23
ZNF3-209ENST00000441298 TRMT112Q9UI30 125 aaKnown RBP16.51■□□□□ 0.23
ZNF3-209ENST00000441298 RIC1Q4ADV7 1423 aa16.51■□□□□ 0.23
ZNF3-209ENST00000441298 SH3TC1Q8TE82 1336 aa16.5■□□□□ 0.23
ZNF3-209ENST00000441298 RTL5Q5HYW3 569 aaPredicted RBP16.5■□□□□ 0.23
ZNF3-209ENST00000441298 CCDC30Q5VVM6 783 aa16.5■□□□□ 0.23
ZNF3-209ENST00000441298 RIC3Q7Z5B4 369 aa16.5■□□□□ 0.23
ZNF3-209ENST00000441298 RBM17Q96I25 401 aaKnown RBP16.5■□□□□ 0.23
ZNF3-209ENST00000441298 NLRP3Q96P20 1036 aa16.5■□□□□ 0.23
ZNF3-209ENST00000441298 PHAXQ9H814 394 aaKnown RBP16.5■□□□□ 0.23
ZNF3-209ENST00000441298 ZC3H4Q9UPT8 1303 aaKnown RBP16.49■□□□□ 0.23
ZNF3-209ENST00000441298 LAMB2P55268 1798 aa16.49■□□□□ 0.23
ZNF3-209ENST00000441298 DICER1Q9UPY3 1922 aaKnown RBP16.49■□□□□ 0.23
ZNF3-209ENST00000441298 SYNE4Q8N205 404 aa16.49■□□□□ 0.23
ZNF3-209ENST00000441298 RRAGCQ9HB90 399 aa16.49■□□□□ 0.23
ZNF3-209ENST00000441298 ZNF277Q9NRM2 450 aaPredicted RBP16.49■□□□□ 0.23
ZNF3-209ENST00000441298 LTBP3Q9NS15 1303 aa16.48■□□□□ 0.23
ZNF3-209ENST00000441298 FANCIQ9NVI1 1328 aa16.48■□□□□ 0.23
ZNF3-209ENST00000441298 PPEF1O14829 653 aaPredicted RBP16.48■□□□□ 0.23
ZNF3-209ENST00000441298 TWISTNBQ3B726 338 aaPredicted RBP16.48■□□□□ 0.23
ZNF3-209ENST00000441298 SLC51AQ86UW1 340 aa16.48■□□□□ 0.23
ZNF3-209ENST00000441298 C7orf43Q8WVR3 580 aa16.48■□□□□ 0.23
ZNF3-209ENST00000441298 STK31Q9BXU1 1019 aa16.48■□□□□ 0.23
ZNF3-209ENST00000441298 RNF123Q5XPI4 1314 aa16.47■□□□□ 0.23
ZNF3-209ENST00000441298 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
ZNF3-209ENST00000441298 MYD88Q99836 296 aa16.47■□□□□ 0.23
ZNF3-209ENST00000441298 ABCC4O15439 1325 aa16.46■□□□□ 0.23
ZNF3-209ENST00000441298 IL16Q14005 1332 aa16.46■□□□□ 0.23
ZNF3-209ENST00000441298 DDX60Q8IY21 1712 aaKnown RBP16.46■□□□□ 0.23
ZNF3-209ENST00000441298 GLTPD2A6NH11 291 aa16.46■□□□□ 0.23
ZNF3-209ENST00000441298 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
ZNF3-209ENST00000441298 FAM89AQ96GI7 184 aa16.46■□□□□ 0.23
ZNF3-209ENST00000441298 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
ZNF3-209ENST00000441298 HOXA10P31260 410 aaPredicted RBP16.45■□□□□ 0.22
ZNF3-209ENST00000441298 DPY19L2Q6NUT2 758 aa16.45■□□□□ 0.22
ZNF3-209ENST00000441298 ISCA1Q9BUE6 129 aa16.45■□□□□ 0.22
ZNF3-209ENST00000441298 CHMP4AQ9BY43 222 aa16.45■□□□□ 0.22
ZNF3-209ENST00000441298 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
ZNF3-209ENST00000441298 TOMM70O94826 608 aa16.44■□□□□ 0.22
ZNF3-209ENST00000441298 SLC10A5Q5PT55 438 aa16.44■□□□□ 0.22
ZNF3-209ENST00000441298 CRAMP1Q96RY5 1269 aa16.44■□□□□ 0.22
ZNF3-209ENST00000441298 TAF1P21675 1872 aa16.44■□□□□ 0.22
ZNF3-209ENST00000441298 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
ZNF3-209ENST00000441298 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
ZNF3-209ENST00000441298 DDNO94850 711 aaPredicted RBP16.42■□□□□ 0.22
ZNF3-209ENST00000441298 IARSP41252 1262 aaKnown RBP16.42■□□□□ 0.22
ZNF3-209ENST00000441298 EXOSC9Q06265 439 aaKnown RBP16.42■□□□□ 0.22
ZNF3-209ENST00000441298 JARID2Q92833 1246 aaPredicted RBP16.42■□□□□ 0.22
ZNF3-209ENST00000441298 MAP3K2Q9Y2U5 619 aa16.42■□□□□ 0.22
ZNF3-209ENST00000441298 ZNF541Q9H0D2 1346 aa16.42■□□□□ 0.22
ZNF3-209ENST00000441298 PI4KAP2A4QPH2 592 aa16.41■□□□□ 0.22
ZNF3-209ENST00000441298 IRS4O14654 1257 aaPredicted RBP16.41■□□□□ 0.22
ZNF3-209ENST00000441298 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
ZNF3-209ENST00000441298 HSPA6P17066 643 aa16.41■□□□□ 0.22
ZNF3-209ENST00000441298 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
ZNF3-209ENST00000441298 CC2D2BQ6DHV5 1058 aa16.41■□□□□ 0.22
ZNF3-209ENST00000441298 G2E3Q7L622 706 aa16.41■□□□□ 0.22
ZNF3-209ENST00000441298 PI4KAP1Q8N8J0 262 aa16.41■□□□□ 0.22
ZNF3-209ENST00000441298 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
ZNF3-209ENST00000441298 SNED1Q8TER0 1413 aa16.4■□□□□ 0.22
ZNF3-209ENST00000441298 VEGFAP15692 232 aaPredicted RBP16.4■□□□□ 0.22
ZNF3-209ENST00000441298 GRAPQ13588 217 aa16.4■□□□□ 0.22
ZNF3-209ENST00000441298 LARGE2Q8N3Y3 721 aa16.4■□□□□ 0.22
ZNF3-209ENST00000441298 RBM46Q8TBY0 533 aaKnown RBP16.4■□□□□ 0.22
ZNF3-209ENST00000441298 GRAPLQ8TC17 118 aaPredicted RBP16.4■□□□□ 0.22
ZNF3-209ENST00000441298 METTL22Q9BUU2 404 aaPredicted RBP16.4■□□□□ 0.22
ZNF3-209ENST00000441298 MYH16Q9H6N6 1097 aa16.4■□□□□ 0.22
ZNF3-209ENST00000441298 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
ZNF3-209ENST00000441298 CWC25Q9NXE8 425 aaPredicted RBP16.4■□□□□ 0.22
ZNF3-209ENST00000441298 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
ZNF3-209ENST00000441298 ZBTB38Q8NAP3 1195 aaPredicted RBP16.39■□□□□ 0.21
ZNF3-209ENST00000441298 JDP2Q8WYK2 163 aa16.39■□□□□ 0.21
ZNF3-209ENST00000441298 CCDC85AQ96PX6 553 aaPredicted RBP16.39■□□□□ 0.21
ZNF3-209ENST00000441298 PSMD1Q99460 953 aa16.39■□□□□ 0.21
ZNF3-209ENST00000441298 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
ZNF3-209ENST00000441298 PPIP5K2O43314 1243 aa16.38■□□□□ 0.21
ZNF3-209ENST00000441298 NEXNQ0ZGT2 675 aa16.38■□□□□ 0.21
ZNF3-209ENST00000441298 TRIM28Q13263 835 aaKnown RBP16.38■□□□□ 0.21
ZNF3-209ENST00000441298 FKBP5Q13451 457 aaPredicted RBP16.38■□□□□ 0.21
ZNF3-209ENST00000441298 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
ZNF3-209ENST00000441298 CCDC191Q8NCU4 936 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms