RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 KAZALD1Q96I82 304 aa21.1■□□□□ 0.97
SATB2-204ENST00000440919 LINS1Q8NG48 757 aa21.1■□□□□ 0.97
SATB2-204ENST00000440919 SUCLG2Q96I99 432 aa21.1■□□□□ 0.97
SATB2-204ENST00000440919 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.1■□□□□ 0.97
SATB2-204ENST00000440919 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.1■□□□□ 0.97
SATB2-204ENST00000440919 ALS2Q96Q42 1657 aa21.09■□□□□ 0.97
SATB2-204ENST00000440919 GRM8O00222 908 aa21.09■□□□□ 0.97
SATB2-204ENST00000440919 SASH1O94885 1247 aa21.09■□□□□ 0.97
SATB2-204ENST00000440919 GLIPR1L2Q4G1C9 344 aa21.09■□□□□ 0.97
SATB2-204ENST00000440919 RBM8AQ9Y5S9 174 aaKnown RBP21.09■□□□□ 0.97
SATB2-204ENST00000440919 NPHP3Q7Z494 1330 aa21.09■□□□□ 0.97
SATB2-204ENST00000440919 ADAMTS7Q9UKP4 1686 aa21.08■□□□□ 0.97
SATB2-204ENST00000440919 STRCQ7RTU9 1775 aa21.08■□□□□ 0.97
SATB2-204ENST00000440919 HCLS1P14317 486 aaPredicted RBP21.08■□□□□ 0.97
SATB2-204ENST00000440919 ZKSCAN1P17029 563 aaPredicted RBP21.08■□□□□ 0.97
SATB2-204ENST00000440919 ME3Q16798 604 aa21.08■□□□□ 0.97
SATB2-204ENST00000440919 KLHL34Q8N239 644 aa21.08■□□□□ 0.97
SATB2-204ENST00000440919 MAP4K1Q92918 833 aa21.08■□□□□ 0.97
SATB2-204ENST00000440919 EAF2Q96CJ1 260 aaPredicted RBP21.08■□□□□ 0.97
SATB2-204ENST00000440919 BICC1Q9H694 974 aaKnown RBP21.08■□□□□ 0.97
SATB2-204ENST00000440919 SNRKQ9NRH2 765 aa21.08■□□□□ 0.97
SATB2-204ENST00000440919 USP25Q9UHP3 1055 aa21.08■□□□□ 0.97
SATB2-204ENST00000440919 HIP1O00291 1037 aa21.07■□□□□ 0.96
SATB2-204ENST00000440919 DNM1Q05193 864 aaKnown RBP21.07■□□□□ 0.96
SATB2-204ENST00000440919 CREB3L3Q68CJ9 461 aa21.07■□□□□ 0.96
SATB2-204ENST00000440919 FAM227BQ96M60 508 aa21.07■□□□□ 0.96
SATB2-204ENST00000440919 FUCA2Q9BTY2 467 aa21.07■□□□□ 0.96
SATB2-204ENST00000440919 DTNBO60941 627 aa21.06■□□□□ 0.96
SATB2-204ENST00000440919 KIAA2012Q0VF49 1180 aa21.06■□□□□ 0.96
SATB2-204ENST00000440919 NMIQ13287 307 aaPredicted RBP21.06■□□□□ 0.96
SATB2-204ENST00000440919 ANKRD24Q8TF21 1146 aa21.06■□□□□ 0.96
SATB2-204ENST00000440919 PDCL3Q9H2J4 239 aa21.06■□□□□ 0.96
SATB2-204ENST00000440919 TPRNQ4KMQ1 711 aa21.06■□□□□ 0.96
SATB2-204ENST00000440919 DDX21Q9NR30 783 aaKnown RBP eCLIP21.06■□□□□ 0.96
SATB2-204ENST00000440919 UQCRHLA0A096LP55 91 aa21.05■□□□□ 0.96
SATB2-204ENST00000440919 DDX58O95786 925 aaKnown RBP21.05■□□□□ 0.96
SATB2-204ENST00000440919 UQCRHP07919 91 aa21.05■□□□□ 0.96
SATB2-204ENST00000440919 G3BP1Q13283 466 aaKnown RBP eCLIP21.05■□□□□ 0.96
SATB2-204ENST00000440919 DDX54Q8TDD1 881 aaKnown RBP21.05■□□□□ 0.96
SATB2-204ENST00000440919 TLR7Q9NYK1 1049 aaKnown RBP21.05■□□□□ 0.96
SATB2-204ENST00000440919 TPCN1Q9ULQ1 816 aa21.05■□□□□ 0.96
SATB2-204ENST00000440919 PDIA6Q15084 440 aa21.04■□□□□ 0.96
SATB2-204ENST00000440919 DDX17Q92841 729 aaKnown RBP21.04■□□□□ 0.96
SATB2-204ENST00000440919 CCDC8Q9H0W5 538 aaPredicted RBP21.04■□□□□ 0.96
SATB2-204ENST00000440919 SLC27A2O14975 620 aa21.04■□□□□ 0.96
SATB2-204ENST00000440919 ADCY5O95622 1261 aa21.04■□□□□ 0.96
SATB2-204ENST00000440919 NECAB1Q8N987 351 aa21.04■□□□□ 0.96
SATB2-204ENST00000440919 XIRP1Q702N8 1843 aaKnown RBP21.04■□□□□ 0.96
SATB2-204ENST00000440919 MRC1P22897 1456 aa21.03■□□□□ 0.96
SATB2-204ENST00000440919 VPS37CA5D8V6 355 aaPredicted RBP21.03■□□□□ 0.96
SATB2-204ENST00000440919 KCNJ4P48050 445 aa21.03■□□□□ 0.96
SATB2-204ENST00000440919 A0A0D9SFI3 127 aa21.03■□□□□ 0.96
SATB2-204ENST00000440919 IGKV5-2P06315 115 aa21.03■□□□□ 0.96
SATB2-204ENST00000440919 COL9A3Q14050 684 aaPredicted RBP21.03■□□□□ 0.96
SATB2-204ENST00000440919 GIMAP6Q6P9H5 292 aa21.03■□□□□ 0.96
SATB2-204ENST00000440919 MED23Q9ULK4 1368 aa21.03■□□□□ 0.96
SATB2-204ENST00000440919 PSMA5P28066 241 aa21.02■□□□□ 0.96
SATB2-204ENST00000440919 AIMP1Q12904 312 aaKnown RBP21.02■□□□□ 0.96
SATB2-204ENST00000440919 SASS6Q6UVJ0 657 aa21.02■□□□□ 0.96
SATB2-204ENST00000440919 C5P01031 1676 aa21.02■□□□□ 0.95
SATB2-204ENST00000440919 AXIN2Q9Y2T1 843 aa21.02■□□□□ 0.95
SATB2-204ENST00000440919 JCADQ9P266 1359 aa21.01■□□□□ 0.95
SATB2-204ENST00000440919 KDM4AO75164 1064 aa21.01■□□□□ 0.95
SATB2-204ENST00000440919 ZC3H6P61129 1189 aaKnown RBP21.01■□□□□ 0.95
SATB2-204ENST00000440919 SIL1Q9H173 461 aa21.01■□□□□ 0.95
SATB2-204ENST00000440919 BOLA2Q9H3K6 86 aa21.01■□□□□ 0.95
SATB2-204ENST00000440919 TNS3Q68CZ2 1445 aa21.01■□□□□ 0.95
SATB2-204ENST00000440919 PDIA4P13667 645 aaKnown RBP21■□□□□ 0.95
SATB2-204ENST00000440919 FSD1Q9BTV5 496 aa21■□□□□ 0.95
SATB2-204ENST00000440919 RBM10P98175 930 aaKnown RBP21■□□□□ 0.95
SATB2-204ENST00000440919 LARP1BQ659C4 914 aaKnown RBP21■□□□□ 0.95
SATB2-204ENST00000440919 MPNDQ8N594 471 aa21■□□□□ 0.95
SATB2-204ENST00000440919 PIBF1Q8WXW3 757 aa21■□□□□ 0.95
SATB2-204ENST00000440919 RGPD5Q99666 1765 aa21■□□□□ 0.95
SATB2-204ENST00000440919 RNF20Q5VTR2 975 aa20.99■□□□□ 0.95
SATB2-204ENST00000440919 ZNF830Q96NB3 372 aaPredicted RBP20.99■□□□□ 0.95
SATB2-204ENST00000440919 ALDH8A1Q9H2A2 487 aaPredicted RBP20.99■□□□□ 0.95
SATB2-204ENST00000440919 BLOC1S2Q6QNY1 142 aa20.99■□□□□ 0.95
SATB2-204ENST00000440919 CDC37L1Q7L3B6 337 aa20.99■□□□□ 0.95
SATB2-204ENST00000440919 RIC3Q7Z5B4 369 aa20.99■□□□□ 0.95
SATB2-204ENST00000440919 KLHDC4Q8TBB5 520 aa20.99■□□□□ 0.95
SATB2-204ENST00000440919 TAF6LQ9Y6J9 622 aa20.99■□□□□ 0.95
SATB2-204ENST00000440919 NEURL1BA8MQ27 555 aa20.98■□□□□ 0.95
SATB2-204ENST00000440919 DYNC1I1O14576 645 aa20.98■□□□□ 0.95
SATB2-204ENST00000440919 RPS6KB1P23443 525 aa20.98■□□□□ 0.95
SATB2-204ENST00000440919 ANKRD1Q15327 319 aa20.98■□□□□ 0.95
SATB2-204ENST00000440919 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
SATB2-204ENST00000440919 TTC6Q86TZ1 520 aa20.98■□□□□ 0.95
SATB2-204ENST00000440919 SPATA31A3Q5VYP0 1347 aa20.98■□□□□ 0.95
SATB2-204ENST00000440919 ZNF335Q9H4Z2 1342 aaPredicted RBP20.98■□□□□ 0.95
SATB2-204ENST00000440919 SCN11AQ9UI33 1791 aa20.98■□□□□ 0.95
SATB2-204ENST00000440919 KRT85P78386 507 aa20.97■□□□□ 0.95
SATB2-204ENST00000440919 ZNF589Q86UQ0 364 aaPredicted RBP20.97■□□□□ 0.95
SATB2-204ENST00000440919 ELP1O95163 1332 aa20.97■□□□□ 0.95
SATB2-204ENST00000440919 ERBB3P21860 1342 aa20.97■□□□□ 0.95
SATB2-204ENST00000440919 PDCP20941 246 aa20.97■□□□□ 0.95
SATB2-204ENST00000440919 TOB2Q14106 344 aaPredicted RBP20.97■□□□□ 0.95
SATB2-204ENST00000440919 ZNF790Q6PG37 636 aa20.97■□□□□ 0.95
SATB2-204ENST00000440919 BRINP3Q76B58 766 aa20.97■□□□□ 0.95
SATB2-204ENST00000440919 TTC12Q9H892 705 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms