RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PI4KAP2A4QPH2 592 aa5.95□□□□□ -1.46
EDEM3-203ENST00000439962 IPO8O15397 1037 aaKnown RBP5.95□□□□□ -1.46
EDEM3-203ENST00000439962 TM4SF1P30408 202 aa5.95□□□□□ -1.46
EDEM3-203ENST00000439962 HDAC1Q13547 482 aaPredicted RBP5.95□□□□□ -1.46
EDEM3-203ENST00000439962 C8orf34Q49A92 452 aa5.95□□□□□ -1.46
EDEM3-203ENST00000439962 DALRD3Q5D0E6 543 aaKnown RBP5.95□□□□□ -1.46
EDEM3-203ENST00000439962 ZKSCAN2Q63HK3 967 aa5.95□□□□□ -1.46
EDEM3-203ENST00000439962 TPTE2Q6XPS3 522 aa5.95□□□□□ -1.46
EDEM3-203ENST00000439962 PI4KAP1Q8N8J0 262 aa5.95□□□□□ -1.46
EDEM3-203ENST00000439962 A0A087WZG4 1122 aa5.95□□□□□ -1.46
EDEM3-203ENST00000439962 FRAT1Q92837 279 aaPredicted RBP5.95□□□□□ -1.46
EDEM3-203ENST00000439962 DDX19BQ9UMR2 479 aa5.95□□□□□ -1.46
EDEM3-203ENST00000439962 MAP3K2Q9Y2U5 619 aa5.95□□□□□ -1.46
EDEM3-203ENST00000439962 PAPPAQ13219 1627 aa5.94□□□□□ -1.46
EDEM3-203ENST00000439962 MVPQ14764 893 aaKnown RBP5.94□□□□□ -1.46
EDEM3-203ENST00000439962 IFT57Q9NWB7 429 aa5.94□□□□□ -1.46
EDEM3-203ENST00000439962 RNF181Q9P0P0 153 aa5.94□□□□□ -1.46
EDEM3-203ENST00000439962 DBF4Q9UBU7 674 aaPredicted RBP5.94□□□□□ -1.46
EDEM3-203ENST00000439962 CD2APQ9Y5K6 639 aa5.94□□□□□ -1.46
EDEM3-203ENST00000439962 MAP3K15Q6ZN16 1313 aa5.94□□□□□ -1.46
EDEM3-203ENST00000439962 KCNA3P22001 575 aa5.94□□□□□ -1.46
EDEM3-203ENST00000439962 ZNF784Q8NCA9 323 aaPredicted RBP5.94□□□□□ -1.46
EDEM3-203ENST00000439962 RPGRQ92834 1020 aaKnown RBP5.94□□□□□ -1.46
EDEM3-203ENST00000439962 GPR101Q96P66 508 aaPredicted RBP5.94□□□□□ -1.46
EDEM3-203ENST00000439962 MRC1P22897 1456 aa5.94□□□□□ -1.46
EDEM3-203ENST00000439962 MKI67P46013 3256 aaKnown RBP5.93□□□□□ -1.46
EDEM3-203ENST00000439962 BCAR3O75815 825 aa5.93□□□□□ -1.46
EDEM3-203ENST00000439962 TTLL6Q8N841 843 aa5.93□□□□□ -1.46
EDEM3-203ENST00000439962 DDX21Q9NR30 783 aaKnown RBP eCLIP5.93□□□□□ -1.46
EDEM3-203ENST00000439962 ZNF277Q9NRM2 450 aaPredicted RBP5.93□□□□□ -1.46
EDEM3-203ENST00000439962 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.93□□□□□ -1.46
EDEM3-203ENST00000439962 CASZ1Q86V15 1759 aa5.93□□□□□ -1.46
EDEM3-203ENST00000439962 CCDC30Q5VVM6 783 aa5.93□□□□□ -1.46
EDEM3-203ENST00000439962 C9orf131Q5VYM1 1079 aa5.93□□□□□ -1.46
EDEM3-203ENST00000439962 PRPF40BQ6NWY9 871 aaKnown RBP5.93□□□□□ -1.46
EDEM3-203ENST00000439962 DZIP1LQ8IYY4 767 aaKnown RBP5.93□□□□□ -1.46
EDEM3-203ENST00000439962 CACNA1FO60840 1977 aa5.93□□□□□ -1.46
EDEM3-203ENST00000439962 ABCC12Q96J65 1359 aa5.93□□□□□ -1.46
EDEM3-203ENST00000439962 GIGYF2Q6Y7W6 1299 aaKnown RBP5.92□□□□□ -1.46
EDEM3-203ENST00000439962 UBE3BQ7Z3V4 1068 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 GPBP1L1Q9HC44 474 aaPredicted RBP5.92□□□□□ -1.46
EDEM3-203ENST00000439962 TJP1Q07157 1748 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 WTIPA6NIX2 430 aaPredicted RBP5.92□□□□□ -1.46
EDEM3-203ENST00000439962 RIMBP2O15034 1052 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 UTP14AQ9BVJ6 771 aaKnown RBP5.92□□□□□ -1.46
EDEM3-203ENST00000439962 GRIN3BO60391 1043 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 PDE6BP35913 854 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 HTRA3P83110 453 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 FLIIQ13045 1269 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 ATF7IPQ6VMQ6 1270 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 NLRP10Q86W26 655 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 NLRP3Q96P20 1036 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 NMRK2Q9NPI5 230 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 SEC31BQ9NQW1 1179 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 SMC4Q9NTJ3 1288 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 LRP5O75197 1615 aa5.92□□□□□ -1.46
EDEM3-203ENST00000439962 SNAP23O00161 211 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 VAMP4O75379 141 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 ZNF853P0CG23 659 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 HMGB2P26583 209 aaKnown RBP5.91□□□□□ -1.46
EDEM3-203ENST00000439962 TGFB2P61812 414 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 BECN1Q14457 450 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 PPP1R42Q7Z4L9 355 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 FBXW7Q969H0 707 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 BRIP1Q9BX63 1249 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 UPF2Q9HAU5 1272 aaKnown RBP5.91□□□□□ -1.46
EDEM3-203ENST00000439962 HYPKQ9NX55 129 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 NSFL1CQ9UNZ2 370 aaKnown RBP5.91□□□□□ -1.46
EDEM3-203ENST00000439962 TNNQ9UQP3 1299 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 GJA3Q9Y6H8 435 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 PXDNLA1KZ92 1463 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 IRS4O14654 1257 aaPredicted RBP5.91□□□□□ -1.46
EDEM3-203ENST00000439962 SRGNP10124 158 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 TCIRG1Q13488 830 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 SMC5Q8IY18 1101 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 DAXXQ9UER7 740 aaPredicted RBP5.91□□□□□ -1.46
EDEM3-203ENST00000439962 JAG2Q9Y219 1238 aa5.91□□□□□ -1.46
EDEM3-203ENST00000439962 C4AP0C0L4 1744 aa5.9□□□□□ -1.46
EDEM3-203ENST00000439962 RGPD3A6NKT7 1758 aaPredicted RBP5.9□□□□□ -1.46
EDEM3-203ENST00000439962 RGPD4Q7Z3J3 1758 aa5.9□□□□□ -1.46
EDEM3-203ENST00000439962 NEXNQ0ZGT2 675 aa5.9□□□□□ -1.46
EDEM3-203ENST00000439962 CLEC4GQ6UXB4 293 aa5.9□□□□□ -1.46
EDEM3-203ENST00000439962 LRP10Q7Z4F1 713 aa5.9□□□□□ -1.46
EDEM3-203ENST00000439962 FTSJ3Q8IY81 847 aaKnown RBP5.9□□□□□ -1.46
EDEM3-203ENST00000439962 IL27Q8NEV9 243 aa5.9□□□□□ -1.46
EDEM3-203ENST00000439962 HELBQ8NG08 1087 aaPredicted RBP5.9□□□□□ -1.46
EDEM3-203ENST00000439962 SSH1Q8WYL5 1049 aa5.9□□□□□ -1.46
EDEM3-203ENST00000439962 SCAF8Q9UPN6 1271 aaKnown RBP5.9□□□□□ -1.46
EDEM3-203ENST00000439962 C6orf229H3BNL8 230 aa5.9□□□□□ -1.47
EDEM3-203ENST00000439962 DDX58O95786 925 aaKnown RBP5.9□□□□□ -1.47
EDEM3-203ENST00000439962 IGHDP01880 384 aa5.9□□□□□ -1.47
EDEM3-203ENST00000439962 PRELPP51888 382 aa5.9□□□□□ -1.47
EDEM3-203ENST00000439962 PLBD2Q8NHP8 589 aa5.9□□□□□ -1.47
EDEM3-203ENST00000439962 CELF1Q92879 486 aaKnown RBP5.9□□□□□ -1.47
EDEM3-203ENST00000439962 MASTLQ96GX5 879 aa5.9□□□□□ -1.47
EDEM3-203ENST00000439962 C9orf78Q9NZ63 289 aaPredicted RBP5.9□□□□□ -1.47
EDEM3-203ENST00000439962 COG6Q9Y2V7 657 aa5.9□□□□□ -1.47
EDEM3-203ENST00000439962 SH3TC1Q8TE82 1336 aa5.9□□□□□ -1.47
EDEM3-203ENST00000439962 COL5A3P25940 1745 aaPredicted RBP5.9□□□□□ -1.47
EDEM3-203ENST00000439962 DDNO94850 711 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms