RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 ATF7IPQ6VMQ6 1270 aa14.93□□□□□ -0.02
AC009404.1-202ENST00000439955 BICDL1Q6ZP65 573 aa14.93□□□□□ -0.02
AC009404.1-202ENST00000439955 CCDC24Q8N4L8 307 aa14.93□□□□□ -0.02
AC009404.1-202ENST00000439955 ZNF622Q969S3 477 aaKnown RBP eCLIP14.93□□□□□ -0.02
AC009404.1-202ENST00000439955 FMNL2Q96PY5 1086 aa14.93□□□□□ -0.02
AC009404.1-202ENST00000439955 STK31Q9BXU1 1019 aa14.93□□□□□ -0.02
AC009404.1-202ENST00000439955 BCL2L12Q9HB09 334 aa14.93□□□□□ -0.02
AC009404.1-202ENST00000439955 PTPRCP08575 1304 aa14.92□□□□□ -0.02
AC009404.1-202ENST00000439955 FRAT1Q92837 279 aaPredicted RBP14.92□□□□□ -0.02
AC009404.1-202ENST00000439955 NARFQ9UHQ1 456 aa14.92□□□□□ -0.02
AC009404.1-202ENST00000439955 HDGFL1Q5TGJ6 251 aa14.91□□□□□ -0.02
AC009404.1-202ENST00000439955 WBP1LQ9NX94 342 aa14.91□□□□□ -0.02
AC009404.1-202ENST00000439955 NOB1Q9ULX3 412 aaKnown RBP14.91□□□□□ -0.02
AC009404.1-202ENST00000439955 PASKQ96RG2 1323 aa14.91□□□□□ -0.02
AC009404.1-202ENST00000439955 COL15A1P39059 1388 aa14.9□□□□□ -0.02
AC009404.1-202ENST00000439955 SNRPA1P09661 255 aaKnown RBP14.9□□□□□ -0.02
AC009404.1-202ENST00000439955 CYP19A1P11511 503 aaPredicted RBP14.9□□□□□ -0.02
AC009404.1-202ENST00000439955 TRIM27P14373 513 aa14.9□□□□□ -0.02
AC009404.1-202ENST00000439955 SLC39A6Q13433 755 aa14.9□□□□□ -0.02
AC009404.1-202ENST00000439955 AAMPQ13685 434 aa14.9□□□□□ -0.02
AC009404.1-202ENST00000439955 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
AC009404.1-202ENST00000439955 ZNF496Q96IT1 587 aaPredicted RBP14.9□□□□□ -0.02
AC009404.1-202ENST00000439955 API5Q9BZZ5 524 aaKnown RBP14.9□□□□□ -0.02
AC009404.1-202ENST00000439955 ZBTB1Q9Y2K1 713 aa14.9□□□□□ -0.02
AC009404.1-202ENST00000439955 CCDC85CA6NKD9 419 aa14.89□□□□□ -0.03
AC009404.1-202ENST00000439955 TMEM88BA6NKF7 163 aa14.89□□□□□ -0.03
AC009404.1-202ENST00000439955 HSPA8P11142 646 aaKnown RBP14.89□□□□□ -0.03
AC009404.1-202ENST00000439955 C20orf194Q5TEA3 1177 aa14.89□□□□□ -0.03
AC009404.1-202ENST00000439955 FTSJ3Q8IY81 847 aaKnown RBP14.89□□□□□ -0.03
AC009404.1-202ENST00000439955 VSIG10Q8N0Z9 540 aa14.89□□□□□ -0.03
AC009404.1-202ENST00000439955 AFDNP55196 1824 aaKnown RBP14.89□□□□□ -0.03
AC009404.1-202ENST00000439955 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
AC009404.1-202ENST00000439955 EAPPQ56P03 285 aaPredicted RBP14.88□□□□□ -0.03
AC009404.1-202ENST00000439955 LDHDQ86WU2 507 aa14.88□□□□□ -0.03
AC009404.1-202ENST00000439955 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
AC009404.1-202ENST00000439955 PPP4R2Q9NY27 417 aa14.88□□□□□ -0.03
AC009404.1-202ENST00000439955 DBF4Q9UBU7 674 aaPredicted RBP14.88□□□□□ -0.03
AC009404.1-202ENST00000439955 ABCC4O15439 1325 aa14.88□□□□□ -0.03
AC009404.1-202ENST00000439955 ERBB4Q15303 1308 aa14.88□□□□□ -0.03
AC009404.1-202ENST00000439955 DLEC1Q9Y238 1755 aa14.88□□□□□ -0.03
AC009404.1-202ENST00000439955 NRXN2Q9P2S2 1712 aa14.87□□□□□ -0.03
AC009404.1-202ENST00000439955 MLLT1Q03111 559 aaPredicted RBP14.87□□□□□ -0.03
AC009404.1-202ENST00000439955 EXOC6Q8TAG9 804 aa14.87□□□□□ -0.03
AC009404.1-202ENST00000439955 TAOK3Q9H2K8 898 aa14.87□□□□□ -0.03
AC009404.1-202ENST00000439955 TAF1DQ9H5J8 278 aaPredicted RBP14.87□□□□□ -0.03
AC009404.1-202ENST00000439955 CCDC88AQ3V6T2 1871 aa14.86□□□□□ -0.03
AC009404.1-202ENST00000439955 ITGBL1O95965 494 aaPredicted RBP14.86□□□□□ -0.03
AC009404.1-202ENST00000439955 MVPQ14764 893 aaKnown RBP14.86□□□□□ -0.03
AC009404.1-202ENST00000439955 PANK1Q8TE04 598 aa14.86□□□□□ -0.03
AC009404.1-202ENST00000439955 CLEC11AQ9Y240 323 aa14.86□□□□□ -0.03
AC009404.1-202ENST00000439955 TCERG1O14776 1098 aaKnown RBP14.85□□□□□ -0.03
AC009404.1-202ENST00000439955 RLBP1P12271 317 aa14.85□□□□□ -0.03
AC009404.1-202ENST00000439955 FLIIQ13045 1269 aa14.85□□□□□ -0.03
AC009404.1-202ENST00000439955 TBC1D9BQ66K14 1250 aa14.85□□□□□ -0.03
AC009404.1-202ENST00000439955 TEX13AQ9BXU3 409 aaPredicted RBP14.85□□□□□ -0.03
AC009404.1-202ENST00000439955 DDX21Q9NR30 783 aaKnown RBP eCLIP14.85□□□□□ -0.03
AC009404.1-202ENST00000439955 IQCA1LA6NCM1 817 aa14.84□□□□□ -0.03
AC009404.1-202ENST00000439955 EIF2S2P20042 333 aaKnown RBP14.84□□□□□ -0.03
AC009404.1-202ENST00000439955 DEFB115Q30KQ5 88 aa14.84□□□□□ -0.03
AC009404.1-202ENST00000439955 CLUAP1Q96AJ1 413 aa14.84□□□□□ -0.03
AC009404.1-202ENST00000439955 BRIP1Q9BX63 1249 aa14.84□□□□□ -0.03
AC009404.1-202ENST00000439955 CHMP4BQ9H444 224 aaKnown RBP14.84□□□□□ -0.03
AC009404.1-202ENST00000439955 HYPKQ9NX55 129 aa14.84□□□□□ -0.03
AC009404.1-202ENST00000439955 CHPF2Q9P2E5 772 aa14.84□□□□□ -0.03
AC009404.1-202ENST00000439955 DDX19BQ9UMR2 479 aa14.84□□□□□ -0.03
AC009404.1-202ENST00000439955 COG6Q9Y2V7 657 aa14.84□□□□□ -0.03
AC009404.1-202ENST00000439955 PDE6BP35913 854 aa14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 MAP1SQ66K74 1059 aaPredicted RBP14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 INTS3Q68E01 1043 aaKnown RBP14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 PRR5LQ6MZQ0 368 aa14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 PCDH10Q9P2E7 1040 aa14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 ABT1Q9ULW3 272 aaKnown RBP14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 TNNQ9UQP3 1299 aa14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 ZNF330Q9Y3S2 320 aaPredicted RBP14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 WDR33Q9C0J8 1336 aaKnown RBP14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 ZNF541Q9H0D2 1346 aa14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 LTBP3Q9NS15 1303 aa14.83□□□□□ -0.04
AC009404.1-202ENST00000439955 PRAMEF22A3QJZ6 481 aa14.82□□□□□ -0.04
AC009404.1-202ENST00000439955 GRM1Q13255 1194 aa14.82□□□□□ -0.04
AC009404.1-202ENST00000439955 PRPF40BQ6NWY9 871 aaKnown RBP14.82□□□□□ -0.04
AC009404.1-202ENST00000439955 TMEM57Q8N5G2 664 aa14.82□□□□□ -0.04
AC009404.1-202ENST00000439955 NECTIN2Q92692 538 aa14.82□□□□□ -0.04
AC009404.1-202ENST00000439955 COL11A2P13942 1736 aaPredicted RBP14.81□□□□□ -0.04
AC009404.1-202ENST00000439955 RASSF10A6NK89 507 aa14.81□□□□□ -0.04
AC009404.1-202ENST00000439955 MAP2K1Q02750 393 aaPredicted RBP14.81□□□□□ -0.04
AC009404.1-202ENST00000439955 FKBP5Q13451 457 aaPredicted RBP14.81□□□□□ -0.04
AC009404.1-202ENST00000439955 PDIA6Q15084 440 aa14.81□□□□□ -0.04
AC009404.1-202ENST00000439955 G2E3Q7L622 706 aa14.81□□□□□ -0.04
AC009404.1-202ENST00000439955 L3MBTL3Q96JM7 780 aaPredicted RBP14.81□□□□□ -0.04
AC009404.1-202ENST00000439955 TBC1D2BQ9UPU7 963 aa14.81□□□□□ -0.04
AC009404.1-202ENST00000439955 USP16Q9Y5T5 823 aa14.81□□□□□ -0.04
AC009404.1-202ENST00000439955 NPHP1O15259 732 aa14.8□□□□□ -0.04
AC009404.1-202ENST00000439955 EPHX2P34913 555 aa14.8□□□□□ -0.04
AC009404.1-202ENST00000439955 PAXIP1Q6ZW49 1069 aaPredicted RBP14.8□□□□□ -0.04
AC009404.1-202ENST00000439955 ITPRIPQ8IWB1 547 aa14.8□□□□□ -0.04
AC009404.1-202ENST00000439955 CNTROBQ8N137 903 aa14.8□□□□□ -0.04
AC009404.1-202ENST00000439955 HACL1Q9UJ83 578 aa14.8□□□□□ -0.04
AC009404.1-202ENST00000439955 TSKSQ9UJT2 592 aa14.8□□□□□ -0.04
AC009404.1-202ENST00000439955 ANKRD31Q8N7Z5 1873 aa14.8□□□□□ -0.04
AC009404.1-202ENST00000439955 DDX58O95786 925 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms