RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 NFAT5O94916 1531 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 PPP2R1AP30153 589 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 HOXC9P31274 260 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 MTHFSP49914 203 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 QPCTQ16769 361 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 PRPF38BQ5VTL8 546 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 DIEXFQ68CQ4 756 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 UNC5CLQ8IV45 518 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 POLKQ9UBT6 870 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 FLT4P35916 1363 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 KIF24Q5T7B8 1368 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 CRYBG1Q9Y4K1 1723 aa8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 COL14A1Q05707 1796 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 SMG6Q86US8 1419 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-208ENST00000436638 CD2BP2O95400 341 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 SKIV2LQ15477 1246 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 SH3D19Q5HYK7 790 aa8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 TOM1L2Q6ZVM7 507 aa8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 FNBP4Q8N3X1 1017 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 ANKRD24Q8TF21 1146 aa8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 TSC1Q92574 1164 aa8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 PRKRIP1Q9H875 184 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 TRPC5Q9UL62 973 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 NUDCQ9Y266 331 aa8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 MARF1Q9Y4F3 1742 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 MYBBP1AQ9BQG0 1328 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 PARD3Q8TEW0 1356 aa8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 BLMP54132 1417 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-208ENST00000436638 CFAP99D6REC4 459 aa8.18□□□□□ -1.1
ECHDC1-208ENST00000436638 RPIAP49247 311 aa8.18□□□□□ -1.1
ECHDC1-208ENST00000436638 TUSC1Q2TAM9 212 aa8.18□□□□□ -1.1
ECHDC1-208ENST00000436638 HSP90AB2PQ58FF8 381 aa8.18□□□□□ -1.1
ECHDC1-208ENST00000436638 PROCA1Q8NCQ7 364 aaPredicted RBP8.18□□□□□ -1.1
ECHDC1-208ENST00000436638 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
ECHDC1-208ENST00000436638 NLRP2Q9NX02 1062 aa8.18□□□□□ -1.1
ECHDC1-208ENST00000436638 DIAPH1O60610 1272 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 LILRB3O75022 631 aa8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 ZNF697Q5TEC3 545 aa8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 ZNF598Q86UK7 904 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 QTRT2Q9H974 415 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 WDR17Q8IZU2 1322 aa8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 INSRP06213 1382 aa8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 SLIT2O94813 1529 aa8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 ABCC6O95255 1503 aa8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 LTN1O94822 1766 aa8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 MAP2P11137 1827 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-208ENST00000436638 GFRA3O60609 400 aa8.16□□□□□ -1.1
ECHDC1-208ENST00000436638 VPS72Q15906 364 aa8.16□□□□□ -1.1
ECHDC1-208ENST00000436638 PLCH1Q4KWH8 1693 aa8.16□□□□□ -1.1
ECHDC1-208ENST00000436638 RTL5Q5HYW3 569 aaPredicted RBP8.16□□□□□ -1.1
ECHDC1-208ENST00000436638 LARP1Q6PKG0 1096 aaKnown RBP8.16□□□□□ -1.1
ECHDC1-208ENST00000436638 CDK12Q9NYV4 1490 aaPredicted RBP8.16□□□□□ -1.1
ECHDC1-208ENST00000436638 USP35Q9P2H5 1018 aa8.16□□□□□ -1.1
ECHDC1-208ENST00000436638 CAMTA1Q9Y6Y1 1673 aa8.16□□□□□ -1.1
ECHDC1-208ENST00000436638 NWD2Q9ULI1 1742 aa8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 COL5A2P05997 1499 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 CRB1P82279 1406 aa8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 U2SURPO15042 1029 aaKnown RBP8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 CCNYL3P0C7X3 344 aa8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 EIF4A2Q14240 407 aaKnown RBP8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 DESI1Q6ICB0 168 aa8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 TCP11L2Q8N4U5 519 aa8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 GJD4Q96KN9 370 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 CARD10Q9BWT7 1032 aa8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 PDZRN3Q9UPQ7 1066 aa8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 THRAP3Q9Y2W1 955 aaKnown RBP8.15□□□□□ -1.1
ECHDC1-208ENST00000436638 LMO7Q8WWI1 1683 aa8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 BCL9LQ86UU0 1499 aa8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 SPATA31A5Q5VU36 1347 aa8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 SPATA31A7Q8IWB4 1347 aa8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 NEFMP07197 916 aa8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 RXRBP28702 533 aa8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 RBM6P78332 1123 aaKnown RBP8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 FOXC1Q12948 553 aa8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 WDR43Q15061 677 aaKnown RBP eCLIP8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 PTPRNQ16849 979 aa8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 COL18A1P39060 1754 aa8.14□□□□□ -1.11
ECHDC1-208ENST00000436638 ATRNO75882 1429 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 SPATA31A1Q5TZJ5 1347 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 PEAK1Q9H792 1746 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 U2AF1L5P0DN76 240 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 TATP17735 454 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 CTHP32929 405 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 IL13P35225 146 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 U2AF1Q01081 240 aaKnown RBP eCLIP8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 TRIM32Q13049 653 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 PTCRAQ6ISU1 281 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 LYPD8Q6UX82 237 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 RAPGEF4Q8WZA2 1011 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 PCMTD1Q96MG8 357 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 ANP32EQ9BTT0 268 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 CDCA7Q9BWT1 371 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 MRS2Q9HD23 443 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 EVA1BQ9NVM1 165 aa8.13□□□□□ -1.11
ECHDC1-208ENST00000436638 RGPD5Q99666 1765 aa8.12□□□□□ -1.11
ECHDC1-208ENST00000436638 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-208ENST00000436638 TNFRSF10AO00220 468 aa8.12□□□□□ -1.11
ECHDC1-208ENST00000436638 IL2RBP14784 551 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms