RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 ADAMTS2O95450 1211 aa14.59□□□□□ -0.07
LINC01090-202ENST00000434418 SOS2Q07890 1332 aaPredicted RBP14.59□□□□□ -0.07
LINC01090-202ENST00000434418 YTHDC2Q9H6S0 1430 aaKnown RBP14.58□□□□□ -0.07
LINC01090-202ENST00000434418 MYOM2P54296 1465 aa14.58□□□□□ -0.08
LINC01090-202ENST00000434418 MYT1Q01538 1121 aa14.58□□□□□ -0.08
LINC01090-202ENST00000434418 XPCQ01831 940 aaPredicted RBP14.58□□□□□ -0.08
LINC01090-202ENST00000434418 ESCO1Q5FWF5 840 aa14.58□□□□□ -0.08
LINC01090-202ENST00000434418 ZNF784Q8NCA9 323 aaPredicted RBP14.58□□□□□ -0.08
LINC01090-202ENST00000434418 PCDHB11Q9Y5F2 797 aa14.58□□□□□ -0.08
LINC01090-202ENST00000434418 ABCC11Q96J66 1382 aa14.58□□□□□ -0.08
LINC01090-202ENST00000434418 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.08
LINC01090-202ENST00000434418 NRXN1Q9ULB1 1477 aa14.57□□□□□ -0.08
LINC01090-202ENST00000434418 ERICH6Q7L0X2 663 aa14.57□□□□□ -0.08
LINC01090-202ENST00000434418 RXRBP28702 533 aa14.56□□□□□ -0.08
LINC01090-202ENST00000434418 DHX9Q08211 1270 aaKnown RBP14.56□□□□□ -0.08
LINC01090-202ENST00000434418 CFAP70Q5T0N1 1121 aa14.56□□□□□ -0.08
LINC01090-202ENST00000434418 RNF20Q5VTR2 975 aa14.56□□□□□ -0.08
LINC01090-202ENST00000434418 CDCA7Q9BWT1 371 aaPredicted RBP14.56□□□□□ -0.08
LINC01090-202ENST00000434418 CYLDQ9NQC7 956 aa14.56□□□□□ -0.08
LINC01090-202ENST00000434418 EMILIN1Q9Y6C2 1016 aa14.56□□□□□ -0.08
LINC01090-202ENST00000434418 PXDNQ92626 1479 aa14.56□□□□□ -0.08
LINC01090-202ENST00000434418 COL22A1Q8NFW1 1626 aaPredicted RBP14.55□□□□□ -0.08
LINC01090-202ENST00000434418 FOXO3O43524 673 aa14.55□□□□□ -0.08
LINC01090-202ENST00000434418 C1orf115Q9H7X2 142 aa14.55□□□□□ -0.08
LINC01090-202ENST00000434418 ACIN1Q9UKV3 1341 aaKnown RBP14.55□□□□□ -0.08
LINC01090-202ENST00000434418 CAPN5O15484 640 aaPredicted RBP14.54□□□□□ -0.08
LINC01090-202ENST00000434418 SCTRP47872 440 aa14.54□□□□□ -0.08
LINC01090-202ENST00000434418 CBLBQ13191 982 aa14.54□□□□□ -0.08
LINC01090-202ENST00000434418 NGLY1Q96IV0 654 aa14.54□□□□□ -0.08
LINC01090-202ENST00000434418 C14orf93Q9H972 538 aaKnown RBP14.54□□□□□ -0.08
LINC01090-202ENST00000434418 NPHP3Q7Z494 1330 aa14.54□□□□□ -0.08
LINC01090-202ENST00000434418 RGPD8O14715 1765 aaPredicted RBP14.53□□□□□ -0.08
LINC01090-202ENST00000434418 SKIP12755 728 aa14.53□□□□□ -0.08
LINC01090-202ENST00000434418 SAFB2Q14151 953 aaKnown RBP eCLIP14.53□□□□□ -0.08
LINC01090-202ENST00000434418 TBC1D9Q6ZT07 1266 aa14.53□□□□□ -0.08
LINC01090-202ENST00000434418 AAASQ9NRG9 546 aa14.53□□□□□ -0.08
LINC01090-202ENST00000434418 PGPEP1Q9NXJ5 209 aa14.53□□□□□ -0.08
LINC01090-202ENST00000434418 CDK12Q9NYV4 1490 aaPredicted RBP14.52□□□□□ -0.08
LINC01090-202ENST00000434418 RGS12O14924 1447 aa14.52□□□□□ -0.08
LINC01090-202ENST00000434418 DHX57Q6P158 1386 aaKnown RBP14.52□□□□□ -0.08
LINC01090-202ENST00000434418 LILRA1O75019 489 aa14.52□□□□□ -0.09
LINC01090-202ENST00000434418 PLPP7Q8NBV4 271 aa14.52□□□□□ -0.09
LINC01090-202ENST00000434418 DOLKQ9UPQ8 538 aa14.52□□□□□ -0.09
LINC01090-202ENST00000434418 KIF1AQ12756 1690 aa14.52□□□□□ -0.09
LINC01090-202ENST00000434418 AXIN1O15169 862 aa14.51□□□□□ -0.09
LINC01090-202ENST00000434418 QTRT2Q9H974 415 aaKnown RBP14.51□□□□□ -0.09
LINC01090-202ENST00000434418 DACH1Q9UI36 760 aa14.51□□□□□ -0.09
LINC01090-202ENST00000434418 ADD1P35611 737 aaKnown RBP14.5□□□□□ -0.09
LINC01090-202ENST00000434418 SMCPP49901 116 aaPredicted RBP14.5□□□□□ -0.09
LINC01090-202ENST00000434418 CTC1Q2NKJ3 1217 aa14.5□□□□□ -0.09
LINC01090-202ENST00000434418 OXLD1Q5BKU9 147 aa14.5□□□□□ -0.09
LINC01090-202ENST00000434418 TRAF7Q6Q0C0 670 aa14.5□□□□□ -0.09
LINC01090-202ENST00000434418 CRIPAKQ8N1N5 446 aa14.5□□□□□ -0.09
LINC01090-202ENST00000434418 PRAM1Q96QH2 718 aa14.5□□□□□ -0.09
LINC01090-202ENST00000434418 ADGRB1O14514 1584 aa14.5□□□□□ -0.09
LINC01090-202ENST00000434418 MARF1Q9Y4F3 1742 aaKnown RBP14.49□□□□□ -0.09
LINC01090-202ENST00000434418 BMP1P13497 986 aa14.49□□□□□ -0.09
LINC01090-202ENST00000434418 DEPDC4Q8N2C3 294 aa14.49□□□□□ -0.09
LINC01090-202ENST00000434418 USP21Q9UK80 565 aa14.49□□□□□ -0.09
LINC01090-202ENST00000434418 RBM6P78332 1123 aaKnown RBP14.48□□□□□ -0.09
LINC01090-202ENST00000434418 DLC1Q96QB1 1528 aa14.47□□□□□ -0.09
LINC01090-202ENST00000434418 USP17L5A8MUK1 530 aa14.47□□□□□ -0.09
LINC01090-202ENST00000434418 ERVK-9P63128 1117 aa14.47□□□□□ -0.09
LINC01090-202ENST00000434418 DCAF11Q8TEB1 546 aa14.47□□□□□ -0.09
LINC01090-202ENST00000434418 SIRT1Q96EB6 747 aa14.47□□□□□ -0.09
LINC01090-202ENST00000434418 USP32Q8NFA0 1604 aa14.47□□□□□ -0.09
LINC01090-202ENST00000434418 PALM3A6NDB9 673 aaPredicted RBP14.46□□□□□ -0.09
LINC01090-202ENST00000434418 MEIOBQ8N635 442 aa14.46□□□□□ -0.09
LINC01090-202ENST00000434418 NFATC2IPQ8NCF5 419 aa14.46□□□□□ -0.09
LINC01090-202ENST00000434418 POGKQ9P215 609 aa14.46□□□□□ -0.09
LINC01090-202ENST00000434418 TFIP11Q9UBB9 837 aaKnown RBP14.46□□□□□ -0.09
LINC01090-202ENST00000434418 TRAK1Q9UPV9 953 aa14.46□□□□□ -0.09
LINC01090-202ENST00000434418 SPATA31A3Q5VYP0 1347 aa14.45□□□□□ -0.1
LINC01090-202ENST00000434418 ATP9BO43861 1147 aa14.45□□□□□ -0.1
LINC01090-202ENST00000434418 ADGRB2O60241 1585 aa14.45□□□□□ -0.1
LINC01090-202ENST00000434418 CC2D2BQ6DHV5 1058 aa14.45□□□□□ -0.1
LINC01090-202ENST00000434418 KRT28Q7Z3Y7 464 aa14.45□□□□□ -0.1
LINC01090-202ENST00000434418 AGBL1Q96MI9 1066 aa14.45□□□□□ -0.1
LINC01090-202ENST00000434418 HIRIP3Q9BW71 556 aaPredicted RBP14.45□□□□□ -0.1
LINC01090-202ENST00000434418 PPP1R12CQ9BZL4 782 aa14.45□□□□□ -0.1
LINC01090-202ENST00000434418 ATRNO75882 1429 aa14.44□□□□□ -0.1
LINC01090-202ENST00000434418 NCOA4Q13772 614 aa14.44□□□□□ -0.1
LINC01090-202ENST00000434418 Q6ZVU0 165 aa14.44□□□□□ -0.1
LINC01090-202ENST00000434418 TRIM46Q7Z4K8 759 aa14.44□□□□□ -0.1
LINC01090-202ENST00000434418 CCDC125Q86Z20 511 aa14.44□□□□□ -0.1
LINC01090-202ENST00000434418 TRPC5Q9UL62 973 aaPredicted RBP14.44□□□□□ -0.1
LINC01090-202ENST00000434418 BCL9LQ86UU0 1499 aa14.44□□□□□ -0.1
LINC01090-202ENST00000434418 TNS3Q68CZ2 1445 aa14.43□□□□□ -0.1
LINC01090-202ENST00000434418 USP17L3A6NCW0 530 aa14.43□□□□□ -0.1
LINC01090-202ENST00000434418 USP17L4A6NCW7 530 aa14.43□□□□□ -0.1
LINC01090-202ENST00000434418 MAP7D1Q3KQU3 841 aa14.43□□□□□ -0.1
LINC01090-202ENST00000434418 USP17L2Q6R6M4 530 aa14.43□□□□□ -0.1
LINC01090-202ENST00000434418 USP17L1Q7RTZ2 530 aa14.43□□□□□ -0.1
LINC01090-202ENST00000434418 OSBPL3Q9H4L5 887 aa14.43□□□□□ -0.1
LINC01090-202ENST00000434418 ABCA3Q99758 1704 aa14.42□□□□□ -0.1
LINC01090-202ENST00000434418 PMFBP1Q8TBY8 1022 aa14.42□□□□□ -0.1
LINC01090-202ENST00000434418 MAFBQ9Y5Q3 323 aaPredicted RBP14.42□□□□□ -0.1
LINC01090-202ENST00000434418 ANKARQ7Z5J8 1434 aa14.41□□□□□ -0.1
LINC01090-202ENST00000434418 ARHGEF28Q8N1W1 1705 aaKnown RBP14.41□□□□□ -0.1
LINC01090-202ENST00000434418 ADH1AP07327 375 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms