RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 CCDC24Q8N4L8 307 aa19.42■□□□□ 0.7
CNOT9-205ENST00000433439 JARID2Q92833 1246 aaPredicted RBP19.42■□□□□ 0.7
CNOT9-205ENST00000433439 CWC25Q9NXE8 425 aaPredicted RBP19.42■□□□□ 0.7
CNOT9-205ENST00000433439 CARMIL3Q8ND23 1372 aa19.42■□□□□ 0.7
CNOT9-205ENST00000433439 POLRMTO00411 1230 aaKnown RBP19.41■□□□□ 0.7
CNOT9-205ENST00000433439 PPP1R42Q7Z4L9 355 aa19.41■□□□□ 0.7
CNOT9-205ENST00000433439 TMEM57Q8N5G2 664 aa19.41■□□□□ 0.7
CNOT9-205ENST00000433439 SPON1Q9HCB6 807 aa19.41■□□□□ 0.7
CNOT9-205ENST00000433439 TRMT112Q9UI30 125 aaKnown RBP19.41■□□□□ 0.7
CNOT9-205ENST00000433439 ABCC4O15439 1325 aa19.41■□□□□ 0.7
CNOT9-205ENST00000433439 MS4A1P11836 297 aa19.4■□□□□ 0.7
CNOT9-205ENST00000433439 RLBP1P12271 317 aa19.4■□□□□ 0.7
CNOT9-205ENST00000433439 CCT4P50991 539 aaKnown RBP19.4■□□□□ 0.7
CNOT9-205ENST00000433439 NUTM1Q86Y26 1132 aa19.4■□□□□ 0.7
CNOT9-205ENST00000433439 CCDC191Q8NCU4 936 aa19.4■□□□□ 0.7
CNOT9-205ENST00000433439 UTP14AQ9BVJ6 771 aaKnown RBP19.4■□□□□ 0.7
CNOT9-205ENST00000433439 ALDH1L1O75891 902 aa19.39■□□□□ 0.69
CNOT9-205ENST00000433439 C20orf194Q5TEA3 1177 aa19.39■□□□□ 0.69
CNOT9-205ENST00000433439 ITPRIPQ8IWB1 547 aa19.39■□□□□ 0.69
CNOT9-205ENST00000433439 KLHL34Q8N239 644 aa19.39■□□□□ 0.69
CNOT9-205ENST00000433439 CNBD1Q8NA66 436 aa19.39■□□□□ 0.69
CNOT9-205ENST00000433439 PXDNLA1KZ92 1463 aa19.38■□□□□ 0.69
CNOT9-205ENST00000433439 TRIM28Q13263 835 aaKnown RBP19.38■□□□□ 0.69
CNOT9-205ENST00000433439 GCKRQ14397 625 aa19.38■□□□□ 0.69
CNOT9-205ENST00000433439 TPTE2Q6XPS3 522 aa19.38■□□□□ 0.69
CNOT9-205ENST00000433439 NYXQ9GZU5 481 aa19.38■□□□□ 0.69
CNOT9-205ENST00000433439 C9orf78Q9NZ63 289 aaPredicted RBP19.38■□□□□ 0.69
CNOT9-205ENST00000433439 COG6Q9Y2V7 657 aa19.38■□□□□ 0.69
CNOT9-205ENST00000433439 NTSR2O95665 410 aa19.37■□□□□ 0.69
CNOT9-205ENST00000433439 ERFEQ4G0M1 354 aa19.37■□□□□ 0.69
CNOT9-205ENST00000433439 INTS3Q68E01 1043 aaKnown RBP19.37■□□□□ 0.69
CNOT9-205ENST00000433439 SYNE4Q8N205 404 aa19.37■□□□□ 0.69
CNOT9-205ENST00000433439 FAM89AQ96GI7 184 aa19.37■□□□□ 0.69
CNOT9-205ENST00000433439 DCAF8L1A6NGE4 600 aa19.36■□□□□ 0.69
CNOT9-205ENST00000433439 PTGER2P43116 358 aa19.36■□□□□ 0.69
CNOT9-205ENST00000433439 PRR5LQ6MZQ0 368 aa19.36■□□□□ 0.69
CNOT9-205ENST00000433439 UBE3BQ7Z3V4 1068 aa19.36■□□□□ 0.69
CNOT9-205ENST00000433439 PPP1R1BQ9UD71 204 aaPredicted RBP19.36■□□□□ 0.69
CNOT9-205ENST00000433439 COL24A1Q17RW2 1714 aa19.36■□□□□ 0.69
CNOT9-205ENST00000433439 SH3TC1Q8TE82 1336 aa19.35■□□□□ 0.69
CNOT9-205ENST00000433439 ST5P78524 1137 aa19.35■□□□□ 0.69
CNOT9-205ENST00000433439 PDE3AQ14432 1141 aa19.35■□□□□ 0.69
CNOT9-205ENST00000433439 GRM8O00222 908 aa19.34■□□□□ 0.69
CNOT9-205ENST00000433439 PCCAP05165 728 aaPredicted RBP19.34■□□□□ 0.69
CNOT9-205ENST00000433439 IRX6P78412 446 aaPredicted RBP19.34■□□□□ 0.69
CNOT9-205ENST00000433439 ZBTB38Q8NAP3 1195 aaPredicted RBP19.34■□□□□ 0.69
CNOT9-205ENST00000433439 SGIP1Q9BQI5 828 aa19.34■□□□□ 0.69
CNOT9-205ENST00000433439 IRS4O14654 1257 aaPredicted RBP19.33■□□□□ 0.68
CNOT9-205ENST00000433439 HCLS1P14317 486 aaPredicted RBP19.33■□□□□ 0.68
CNOT9-205ENST00000433439 ABCC12Q96J65 1359 aa19.32■□□□□ 0.68
CNOT9-205ENST00000433439 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
CNOT9-205ENST00000433439 H7C1W4 665 aa19.32■□□□□ 0.68
CNOT9-205ENST00000433439 NBPF7P0C2Y1 421 aaPredicted RBP19.32■□□□□ 0.68
CNOT9-205ENST00000433439 MVPQ14764 893 aaKnown RBP19.32■□□□□ 0.68
CNOT9-205ENST00000433439 MEIS3Q99687 375 aa19.32■□□□□ 0.68
CNOT9-205ENST00000433439 USP44Q9H0E7 712 aa19.32■□□□□ 0.68
CNOT9-205ENST00000433439 N4BP2Q86UW6 1770 aaPredicted RBP19.32■□□□□ 0.68
CNOT9-205ENST00000433439 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
CNOT9-205ENST00000433439 UBTFL1P0CB47 393 aaPredicted RBP19.31■□□□□ 0.68
CNOT9-205ENST00000433439 CRBNQ96SW2 442 aa19.3■□□□□ 0.68
CNOT9-205ENST00000433439 NRXN2Q9P2S2 1712 aa19.29■□□□□ 0.68
CNOT9-205ENST00000433439 ZNF784Q8NCA9 323 aaPredicted RBP19.29■□□□□ 0.68
CNOT9-205ENST00000433439 SUCLG2Q96I99 432 aa19.29■□□□□ 0.68
CNOT9-205ENST00000433439 DDX19BQ9UMR2 479 aa19.29■□□□□ 0.68
CNOT9-205ENST00000433439 CDHR2Q9BYE9 1310 aa19.28■□□□□ 0.68
CNOT9-205ENST00000433439 GNAI3P08754 354 aa19.28■□□□□ 0.68
CNOT9-205ENST00000433439 CASP7P55210 303 aa19.28■□□□□ 0.68
CNOT9-205ENST00000433439 NLRP3Q96P20 1036 aa19.28■□□□□ 0.68
CNOT9-205ENST00000433439 CCDC85AQ96PX6 553 aaPredicted RBP19.28■□□□□ 0.68
CNOT9-205ENST00000433439 PDE8AO60658 829 aa19.27■□□□□ 0.68
CNOT9-205ENST00000433439 SLC10A5Q5PT55 438 aa19.27■□□□□ 0.68
CNOT9-205ENST00000433439 C3orf67Q6ZVT6 689 aa19.27■□□□□ 0.68
CNOT9-205ENST00000433439 BRIP1Q9BX63 1249 aa19.27■□□□□ 0.68
CNOT9-205ENST00000433439 C1orf115Q9H7X2 142 aa19.27■□□□□ 0.68
CNOT9-205ENST00000433439 CHMP3Q9Y3E7 222 aa19.27■□□□□ 0.68
CNOT9-205ENST00000433439 UTYO14607 1347 aa19.26■□□□□ 0.67
CNOT9-205ENST00000433439 C10orf71Q711Q0 1435 aa19.26■□□□□ 0.67
CNOT9-205ENST00000433439 ZBTB7BO15156 539 aaPredicted RBP19.26■□□□□ 0.67
CNOT9-205ENST00000433439 HSP90B1P14625 803 aaKnown RBP19.26■□□□□ 0.67
CNOT9-205ENST00000433439 LRRFIP2Q9Y608 721 aaKnown RBP19.26■□□□□ 0.67
CNOT9-205ENST00000433439 DDX60Q8IY21 1712 aaKnown RBP19.25■□□□□ 0.67
CNOT9-205ENST00000433439 ANKRD31Q8N7Z5 1873 aa19.25■□□□□ 0.67
CNOT9-205ENST00000433439 TNRC6CQ9HCJ0 1690 aaKnown RBP19.25■□□□□ 0.67
CNOT9-205ENST00000433439 CHRNA5P30532 468 aa19.25■□□□□ 0.67
CNOT9-205ENST00000433439 PDE6BP35913 854 aa19.25■□□□□ 0.67
CNOT9-205ENST00000433439 C1QTNF8P60827 252 aa19.25■□□□□ 0.67
CNOT9-205ENST00000433439 EPHA10Q5JZY3 1008 aa19.25■□□□□ 0.67
CNOT9-205ENST00000433439 C2CD5Q86YS7 1000 aa19.25■□□□□ 0.67
CNOT9-205ENST00000433439 GNAI2P04899 355 aa19.24■□□□□ 0.67
CNOT9-205ENST00000433439 CTSWP56202 376 aa19.24■□□□□ 0.67
CNOT9-205ENST00000433439 RPGRQ92834 1020 aaKnown RBP19.24■□□□□ 0.67
CNOT9-205ENST00000433439 FHDC1Q9C0D6 1143 aaPredicted RBP19.24■□□□□ 0.67
CNOT9-205ENST00000433439 BICC1Q9H694 974 aaKnown RBP19.24■□□□□ 0.67
CNOT9-205ENST00000433439 HDAC5Q9UQL6 1122 aa19.24■□□□□ 0.67
CNOT9-205ENST00000433439 H0YIN7 160 aa19.23■□□□□ 0.67
CNOT9-205ENST00000433439 LMBR1LQ6UX01 489 aa19.23■□□□□ 0.67
CNOT9-205ENST00000433439 EXOC6Q8TAG9 804 aa19.23■□□□□ 0.67
CNOT9-205ENST00000433439 ZNF622Q969S3 477 aaKnown RBP eCLIP19.23■□□□□ 0.67
CNOT9-205ENST00000433439 CHMP4BQ9H444 224 aaKnown RBP19.23■□□□□ 0.67
CNOT9-205ENST00000433439 WWC3Q9ULE0 1092 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms