RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 C8orf58Q8NAV2 365 aa7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 TSR2Q969E8 191 aaKnown RBP7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 OCEL1Q9H607 264 aa7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 CD2APQ9Y5K6 639 aa7.49□□□□□ -1.21
HMGB3P24-201ENST00000433260 N4BP2Q86UW6 1770 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 POLRMTO00411 1230 aaKnown RBP7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 CAMTA2O94983 1202 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 ZNF853P0CG23 659 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 PROSER3Q2NL68 480 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 TTLL7Q6ZT98 887 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 SLC39A7Q92504 469 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 ZNF428Q96B54 188 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 MS4A4AQ96JQ5 239 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 SETDB2Q96T68 719 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 ZBTB3Q9H5J0 574 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 IFT57Q9NWB7 429 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 LAMB4A4D0S4 1761 aa7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 AFDNP55196 1824 aaKnown RBP7.48□□□□□ -1.21
HMGB3P24-201ENST00000433260 CCER2I3L3R5 266 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 NPHP1O15259 732 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 DPEP1P16444 411 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 PDIA6Q15084 440 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 CCDC27Q2M243 656 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 HDGFL1Q5TGJ6 251 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 KIF6Q6ZMV9 814 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 COPS6Q7L5N1 327 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 TSPYL6Q8N831 410 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 CHPF2Q9P2E5 772 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 NUP98P52948 1817 aa7.47□□□□□ -1.21
HMGB3P24-201ENST00000433260 GPTP24298 496 aa7.46□□□□□ -1.22
HMGB3P24-201ENST00000433260 CHRNA5P30532 468 aa7.46□□□□□ -1.22
HMGB3P24-201ENST00000433260 WDR63Q8IWG1 891 aa7.46□□□□□ -1.22
HMGB3P24-201ENST00000433260 XAGE3Q8WTP9 111 aa7.46□□□□□ -1.22
HMGB3P24-201ENST00000433260 NIP7Q9Y221 180 aaKnown RBP eCLIP7.46□□□□□ -1.22
HMGB3P24-201ENST00000433260 C7P10643 843 aa7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 YBX3P16989 372 aaKnown RBP eCLIP7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 PDE4AP27815 886 aa7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 GTF2E1P29083 439 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 TGFB2P61812 414 aa7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 IRX5P78411 483 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 EXOSC9Q06265 439 aaKnown RBP7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 PRR5LQ6MZQ0 368 aa7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 NBPF5PQ86XG9 351 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 L3MBTL3Q96JM7 780 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 PHAXQ9H814 394 aaKnown RBP7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 DDX21Q9NR30 783 aaKnown RBP eCLIP7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 DBF4Q9UBU7 674 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 BCS1LQ9Y276 419 aa7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 ZNF652Q9Y2D9 606 aa7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 MAP3K15Q6ZN16 1313 aa7.45□□□□□ -1.22
HMGB3P24-201ENST00000433260 BCORQ6W2J9 1755 aa7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 ERVV-1B6SEH8 477 aa7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 KCNA3P22001 575 aa7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 TWISTNBQ3B726 338 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 CLEC4GQ6UXB4 293 aa7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 TPTE2Q6XPS3 522 aa7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 ANKRD13DQ6ZTN6 518 aa7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 NUTM1Q86Y26 1132 aa7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 C2CD5Q86YS7 1000 aa7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 ZNF622Q969S3 477 aaKnown RBP eCLIP7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 PIM2Q9P1W9 311 aa7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 ERBB4Q15303 1308 aa7.44□□□□□ -1.22
HMGB3P24-201ENST00000433260 KIF13BQ9NQT8 1826 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 H0YIN7 160 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 HOXB7P09629 217 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 ST5P78524 1137 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 ERFEQ4G0M1 354 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 CCDC30Q5VVM6 783 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 SUSD4Q5VX71 490 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 GIGYF2Q6Y7W6 1299 aaKnown RBP7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 ARHGAP27Q6ZUM4 889 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 LRP10Q7Z4F1 713 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 RIC3Q7Z5B4 369 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 ZNF34Q8IZ26 560 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 CNBD1Q8NA66 436 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 CDCA7LQ96GN5 454 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 HYPKQ9NX55 129 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 SCN7AQ01118 1682 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 IL16Q14005 1332 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 FANCIQ9NVI1 1328 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 CARMIL3Q8ND23 1372 aa7.43□□□□□ -1.22
HMGB3P24-201ENST00000433260 KIAA1551Q9HCM1 1747 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 ATP5J2-PTCD1G3V325 749 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 GRIN3BO60391 1043 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 VAMP4O75379 141 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 YY1P25490 414 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 PDE6BP35913 854 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 TCIRG1Q13488 830 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 RTL5Q5HYW3 569 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 G2E3Q7L622 706 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 PDCD7Q8N8D1 485 aaKnown RBP7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 BRIP1Q9BX63 1249 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 STK31Q9BXU1 1019 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 MYH16Q9H6N6 1097 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 BOLA1Q9Y3E2 137 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 CACNA1SQ13698 1873 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 ANKRD31Q8N7Z5 1873 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 C10orf71Q711Q0 1435 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 PXDNLA1KZ92 1463 aa7.42□□□□□ -1.22
HMGB3P24-201ENST00000433260 NRXN2Q9P2S2 1712 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 967.8 ms