RNA–Protein interactions for RNA: ENST00000433241.5

UBE2F-208, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-208ENST00000433241 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
UBE2F-208ENST00000433241 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
UBE2F-208ENST00000433241 CRY2Q49AN0 593 aa13.03□□□□□ -0.32
UBE2F-208ENST00000433241 CCDC30Q5VVM6 783 aa13.03□□□□□ -0.32
UBE2F-208ENST00000433241 PPP1R42Q7Z4L9 355 aa13.03□□□□□ -0.32
UBE2F-208ENST00000433241 NLRP10Q86W26 655 aa13.03□□□□□ -0.32
UBE2F-208ENST00000433241 CNKSR1Q969H4 720 aa13.03□□□□□ -0.32
UBE2F-208ENST00000433241 RNF123Q5XPI4 1314 aa13.03□□□□□ -0.32
UBE2F-208ENST00000433241 TIAM2Q8IVF5 1701 aa13.02□□□□□ -0.32
UBE2F-208ENST00000433241 NPR1P16066 1061 aa13.02□□□□□ -0.33
UBE2F-208ENST00000433241 GTF2E1P29083 439 aaPredicted RBP13.02□□□□□ -0.33
UBE2F-208ENST00000433241 SLC10A5Q5PT55 438 aa13.02□□□□□ -0.33
UBE2F-208ENST00000433241 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.33
UBE2F-208ENST00000433241 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
UBE2F-208ENST00000433241 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
UBE2F-208ENST00000433241 PRPF40BQ6NWY9 871 aaKnown RBP13.01□□□□□ -0.33
UBE2F-208ENST00000433241 UTP14AQ9BVJ6 771 aaKnown RBP13.01□□□□□ -0.33
UBE2F-208ENST00000433241 TAF1P21675 1872 aa13□□□□□ -0.33
UBE2F-208ENST00000433241 NFKBIEO00221 500 aa13□□□□□ -0.33
UBE2F-208ENST00000433241 C21orf2O43822 256 aa13□□□□□ -0.33
UBE2F-208ENST00000433241 VAMP4O75379 141 aa13□□□□□ -0.33
UBE2F-208ENST00000433241 PRELPP51888 382 aa13□□□□□ -0.33
UBE2F-208ENST00000433241 TRIM28Q13263 835 aaKnown RBP13□□□□□ -0.33
UBE2F-208ENST00000433241 C7orf43Q8WVR3 580 aa13□□□□□ -0.33
UBE2F-208ENST00000433241 SNED1Q8TER0 1413 aa12.99□□□□□ -0.33
UBE2F-208ENST00000433241 HOXA10P31260 410 aaPredicted RBP12.99□□□□□ -0.33
UBE2F-208ENST00000433241 RASSF7Q02833 373 aa12.99□□□□□ -0.33
UBE2F-208ENST00000433241 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
UBE2F-208ENST00000433241 DIEXFQ68CQ4 756 aaKnown RBP12.99□□□□□ -0.33
UBE2F-208ENST00000433241 C3orf67Q6ZVT6 689 aa12.99□□□□□ -0.33
UBE2F-208ENST00000433241 RIC3Q7Z5B4 369 aa12.99□□□□□ -0.33
UBE2F-208ENST00000433241 SYNE4Q8N205 404 aa12.99□□□□□ -0.33
UBE2F-208ENST00000433241 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
UBE2F-208ENST00000433241 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
UBE2F-208ENST00000433241 LTBP3Q9NS15 1303 aa12.98□□□□□ -0.33
UBE2F-208ENST00000433241 ATP5J2-PTCD1G3V325 749 aa12.98□□□□□ -0.33
UBE2F-208ENST00000433241 ALDH1B1P30837 517 aa12.98□□□□□ -0.33
UBE2F-208ENST00000433241 STK31Q9BXU1 1019 aa12.98□□□□□ -0.33
UBE2F-208ENST00000433241 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
UBE2F-208ENST00000433241 MYH3P11055 1940 aa12.98□□□□□ -0.33
UBE2F-208ENST00000433241 TCERG1O14776 1098 aaKnown RBP12.97□□□□□ -0.33
UBE2F-208ENST00000433241 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
UBE2F-208ENST00000433241 SLC4A2P04920 1241 aa12.97□□□□□ -0.33
UBE2F-208ENST00000433241 LMNB1P20700 586 aa12.97□□□□□ -0.33
UBE2F-208ENST00000433241 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
UBE2F-208ENST00000433241 G2E3Q7L622 706 aa12.97□□□□□ -0.33
UBE2F-208ENST00000433241 NLRP3Q96P20 1036 aa12.97□□□□□ -0.33
UBE2F-208ENST00000433241 CRAMP1Q96RY5 1269 aa12.97□□□□□ -0.33
UBE2F-208ENST00000433241 METTL22Q9BUU2 404 aaPredicted RBP12.97□□□□□ -0.33
UBE2F-208ENST00000433241 RNF181Q9P0P0 153 aa12.97□□□□□ -0.33
UBE2F-208ENST00000433241 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
UBE2F-208ENST00000433241 ZC3H4Q9UPT8 1303 aaKnown RBP12.96□□□□□ -0.33
UBE2F-208ENST00000433241 KSR2Q6VAB6 950 aa12.96□□□□□ -0.33
UBE2F-208ENST00000433241 MIER1Q8N108 512 aa12.96□□□□□ -0.33
UBE2F-208ENST00000433241 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
UBE2F-208ENST00000433241 RBM17Q96I25 401 aaKnown RBP12.96□□□□□ -0.33
UBE2F-208ENST00000433241 MYD88Q99836 296 aa12.96□□□□□ -0.33
UBE2F-208ENST00000433241 MAP3K2Q9Y2U5 619 aa12.96□□□□□ -0.33
UBE2F-208ENST00000433241 LRRC37AA6NMS7 1700 aa12.96□□□□□ -0.34
UBE2F-208ENST00000433241 PI4KAP2A4QPH2 592 aa12.95□□□□□ -0.34
UBE2F-208ENST00000433241 HCLS1P14317 486 aaPredicted RBP12.95□□□□□ -0.34
UBE2F-208ENST00000433241 CCDC93Q567U6 631 aa12.95□□□□□ -0.34
UBE2F-208ENST00000433241 PI4KAP1Q8N8J0 262 aa12.95□□□□□ -0.34
UBE2F-208ENST00000433241 CCDC191Q8NCU4 936 aa12.95□□□□□ -0.34
UBE2F-208ENST00000433241 FAM89AQ96GI7 184 aa12.95□□□□□ -0.34
UBE2F-208ENST00000433241 COL4A1P02462 1669 aa12.94□□□□□ -0.34
UBE2F-208ENST00000433241 E9PSI1 815 aa12.94□□□□□ -0.34
UBE2F-208ENST00000433241 IGKV5-2P06315 115 aa12.94□□□□□ -0.34
UBE2F-208ENST00000433241 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
UBE2F-208ENST00000433241 FLIIQ13045 1269 aa12.94□□□□□ -0.34
UBE2F-208ENST00000433241 OLFM4Q6UX06 510 aa12.94□□□□□ -0.34
UBE2F-208ENST00000433241 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
UBE2F-208ENST00000433241 ZNF428Q96B54 188 aa12.94□□□□□ -0.34
UBE2F-208ENST00000433241 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
UBE2F-208ENST00000433241 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
UBE2F-208ENST00000433241 ABCC4O15439 1325 aa12.93□□□□□ -0.34
UBE2F-208ENST00000433241 SF3B3Q15393 1217 aaKnown RBP12.93□□□□□ -0.34
UBE2F-208ENST00000433241 TRMT2AQ8IZ69 625 aaKnown RBP12.93□□□□□ -0.34
UBE2F-208ENST00000433241 RTKN2Q8IZC4 609 aa12.93□□□□□ -0.34
UBE2F-208ENST00000433241 ZNF526Q8TF50 670 aaPredicted RBP12.93□□□□□ -0.34
UBE2F-208ENST00000433241 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
UBE2F-208ENST00000433241 IRS4O14654 1257 aaPredicted RBP12.92□□□□□ -0.34
UBE2F-208ENST00000433241 PPEF1O14829 653 aaPredicted RBP12.92□□□□□ -0.34
UBE2F-208ENST00000433241 PCCAP05165 728 aaPredicted RBP12.92□□□□□ -0.34
UBE2F-208ENST00000433241 FKBP4Q02790 459 aaKnown RBP eCLIP12.92□□□□□ -0.34
UBE2F-208ENST00000433241 CC2D2BQ6DHV5 1058 aa12.92□□□□□ -0.34
UBE2F-208ENST00000433241 CDCA7LQ96GN5 454 aa12.92□□□□□ -0.34
UBE2F-208ENST00000433241 WDR90Q96KV7 1748 aa12.92□□□□□ -0.34
UBE2F-208ENST00000433241 NEURL1BA8MQ27 555 aa12.91□□□□□ -0.34
UBE2F-208ENST00000433241 KIF3CO14782 793 aa12.91□□□□□ -0.34
UBE2F-208ENST00000433241 KCNA4P22459 653 aa12.91□□□□□ -0.34
UBE2F-208ENST00000433241 FKBP5Q13451 457 aaPredicted RBP12.91□□□□□ -0.34
UBE2F-208ENST00000433241 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
UBE2F-208ENST00000433241 SLC51AQ86UW1 340 aa12.91□□□□□ -0.34
UBE2F-208ENST00000433241 PSMD1Q99460 953 aa12.91□□□□□ -0.34
UBE2F-208ENST00000433241 ATP6V0A2Q9Y487 856 aa12.91□□□□□ -0.34
UBE2F-208ENST00000433241 LTBP1Q14766 1721 aa12.91□□□□□ -0.34
UBE2F-208ENST00000433241 CDHR2Q9BYE9 1310 aa12.9□□□□□ -0.34
UBE2F-208ENST00000433241 COL4A5P29400 1685 aa12.9□□□□□ -0.34
UBE2F-208ENST00000433241 BBOX1O75936 387 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms