RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 KCNQ2O43526 872 aa17.56■□□□□ 0.4
CALD1-207ENST00000430085 TRIM37O94972 964 aa17.56■□□□□ 0.4
CALD1-207ENST00000430085 TCIRG1Q13488 830 aa17.56■□□□□ 0.4
CALD1-207ENST00000430085 PTF1AQ7RTS3 328 aa17.56■□□□□ 0.4
CALD1-207ENST00000430085 MAP3K15Q6ZN16 1313 aa17.55■□□□□ 0.4
CALD1-207ENST00000430085 CASP7P55210 303 aa17.55■□□□□ 0.4
CALD1-207ENST00000430085 RABL6Q3YEC7 729 aaPredicted RBP17.55■□□□□ 0.4
CALD1-207ENST00000430085 ZBTB1Q9Y2K1 713 aa17.55■□□□□ 0.4
CALD1-207ENST00000430085 ATP6V1AP38606 617 aa17.55■□□□□ 0.4
CALD1-207ENST00000430085 SMARCC1Q92922 1105 aaPredicted RBP17.55■□□□□ 0.4
CALD1-207ENST00000430085 BTAF1O14981 1849 aa17.54■□□□□ 0.4
CALD1-207ENST00000430085 LOC102724428A0A0B4J2F2 783 aa17.54■□□□□ 0.4
CALD1-207ENST00000430085 SIK1P57059 783 aa17.54■□□□□ 0.4
CALD1-207ENST00000430085 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
CALD1-207ENST00000430085 PALLDQ8WX93 1383 aa17.53■□□□□ 0.4
CALD1-207ENST00000430085 TRIM6-TRIM34B2RNG4 842 aa17.53■□□□□ 0.4
CALD1-207ENST00000430085 IL6STP40189 918 aaPredicted RBP17.53■□□□□ 0.4
CALD1-207ENST00000430085 BECN1Q14457 450 aa17.53■□□□□ 0.4
CALD1-207ENST00000430085 SIL1Q9H173 461 aa17.53■□□□□ 0.4
CALD1-207ENST00000430085 HSP90AB3PQ58FF7 597 aa17.53■□□□□ 0.4
CALD1-207ENST00000430085 RTL5Q5HYW3 569 aaPredicted RBP17.53■□□□□ 0.4
CALD1-207ENST00000430085 IFIT2P09913 472 aaKnown RBP17.52■□□□□ 0.4
CALD1-207ENST00000430085 RBM25P49756 843 aaKnown RBP17.52■□□□□ 0.4
CALD1-207ENST00000430085 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.4
CALD1-207ENST00000430085 GIGYF2Q6Y7W6 1299 aaKnown RBP17.52■□□□□ 0.4
CALD1-207ENST00000430085 GPATCH3Q96I76 525 aa17.52■□□□□ 0.4
CALD1-207ENST00000430085 COPRSQ9NQ92 184 aa17.52■□□□□ 0.4
CALD1-207ENST00000430085 CHMP3Q9Y3E7 222 aa17.52■□□□□ 0.4
CALD1-207ENST00000430085 LMBR1LQ6UX01 489 aa17.51■□□□□ 0.39
CALD1-207ENST00000430085 KLHDC4Q8TBB5 520 aa17.51■□□□□ 0.39
CALD1-207ENST00000430085 RILPL2Q969X0 211 aa17.51■□□□□ 0.39
CALD1-207ENST00000430085 BCL11BQ9C0K0 894 aaPredicted RBP17.51■□□□□ 0.39
CALD1-207ENST00000430085 CCDC87Q9NVE4 849 aa17.51■□□□□ 0.39
CALD1-207ENST00000430085 TTC41PQ6P2S7 1318 aa17.51■□□□□ 0.39
CALD1-207ENST00000430085 SASH1O94885 1247 aa17.51■□□□□ 0.39
CALD1-207ENST00000430085 FOXO4P98177 505 aa17.51■□□□□ 0.39
CALD1-207ENST00000430085 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
CALD1-207ENST00000430085 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
CALD1-207ENST00000430085 SLC4A3P48751 1232 aa17.5■□□□□ 0.39
CALD1-207ENST00000430085 AACSQ86V21 672 aa17.5■□□□□ 0.39
CALD1-207ENST00000430085 DZIP3Q86Y13 1208 aaKnown RBP17.5■□□□□ 0.39
CALD1-207ENST00000430085 USP42Q9H9J4 1324 aaKnown RBP17.5■□□□□ 0.39
CALD1-207ENST00000430085 CICQ96RK0 1608 aaPredicted RBP17.49■□□□□ 0.39
CALD1-207ENST00000430085 ERVV-1B6SEH8 477 aa17.49■□□□□ 0.39
CALD1-207ENST00000430085 ERC2O15083 957 aa17.49■□□□□ 0.39
CALD1-207ENST00000430085 CRKLP46109 303 aaKnown RBP17.49■□□□□ 0.39
CALD1-207ENST00000430085 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
CALD1-207ENST00000430085 PI4K2BQ8TCG2 481 aa17.49■□□□□ 0.39
CALD1-207ENST00000430085 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
CALD1-207ENST00000430085 HLFQ16534 295 aa17.49■□□□□ 0.39
CALD1-207ENST00000430085 INTS5Q6P9B9 1019 aaKnown RBP17.49■□□□□ 0.39
CALD1-207ENST00000430085 GLRX3O76003 335 aaKnown RBP17.48■□□□□ 0.39
CALD1-207ENST00000430085 REC8O95072 547 aa17.48■□□□□ 0.39
CALD1-207ENST00000430085 PCCAP05165 728 aaPredicted RBP17.48■□□□□ 0.39
CALD1-207ENST00000430085 ITPK1Q13572 414 aa17.48■□□□□ 0.39
CALD1-207ENST00000430085 ZBTB38Q8NAP3 1195 aaPredicted RBP17.48■□□□□ 0.39
CALD1-207ENST00000430085 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
CALD1-207ENST00000430085 TBC1D2BQ9UPU7 963 aa17.48■□□□□ 0.39
CALD1-207ENST00000430085 GPTP24298 496 aa17.47■□□□□ 0.39
CALD1-207ENST00000430085 EIF5P55010 431 aaKnown RBP17.47■□□□□ 0.39
CALD1-207ENST00000430085 APBA3O96018 575 aa17.47■□□□□ 0.39
CALD1-207ENST00000430085 CNTROBQ8N137 903 aa17.47■□□□□ 0.39
CALD1-207ENST00000430085 ANKRD36CQ5JPF3 1778 aa17.47■□□□□ 0.39
CALD1-207ENST00000430085 NLRP10Q86W26 655 aa17.46■□□□□ 0.39
CALD1-207ENST00000430085 EAF2Q96CJ1 260 aaPredicted RBP17.46■□□□□ 0.39
CALD1-207ENST00000430085 FAM89AQ96GI7 184 aa17.46■□□□□ 0.39
CALD1-207ENST00000430085 RREB1Q92766 1687 aa17.45■□□□□ 0.38
CALD1-207ENST00000430085 MAP4K4O95819 1239 aaPredicted RBP17.45■□□□□ 0.38
CALD1-207ENST00000430085 CHMLP26374 656 aa17.45■□□□□ 0.38
CALD1-207ENST00000430085 SF3B2Q13435 895 aaKnown RBP17.45■□□□□ 0.38
CALD1-207ENST00000430085 CCDC8Q9H0W5 538 aaPredicted RBP17.45■□□□□ 0.38
CALD1-207ENST00000430085 NUP98P52948 1817 aa17.44■□□□□ 0.38
CALD1-207ENST00000430085 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
CALD1-207ENST00000430085 CCDC125Q86Z20 511 aa17.44■□□□□ 0.38
CALD1-207ENST00000430085 PLA2G12BQ9BX93 195 aa17.44■□□□□ 0.38
CALD1-207ENST00000430085 USP26Q9BXU7 913 aa17.44■□□□□ 0.38
CALD1-207ENST00000430085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.44■□□□□ 0.38
CALD1-207ENST00000430085 AK9Q5TCS8 1911 aa17.44■□□□□ 0.38
CALD1-207ENST00000430085 LY75O60449 1722 aa17.44■□□□□ 0.38
CALD1-207ENST00000430085 CDHR2Q9BYE9 1310 aa17.44■□□□□ 0.38
CALD1-207ENST00000430085 TFCP2Q12800 502 aa17.43■□□□□ 0.38
CALD1-207ENST00000430085 CCDC57Q2TAC2 916 aa17.43■□□□□ 0.38
CALD1-207ENST00000430085 ESYT1Q9BSJ8 1104 aa17.43■□□□□ 0.38
CALD1-207ENST00000430085 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
CALD1-207ENST00000430085 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
CALD1-207ENST00000430085 DEFB132Q7Z7B7 95 aa17.43■□□□□ 0.38
CALD1-207ENST00000430085 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
CALD1-207ENST00000430085 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
CALD1-207ENST00000430085 TRMT112Q9UI30 125 aaKnown RBP17.43■□□□□ 0.38
CALD1-207ENST00000430085 COL5A3P25940 1745 aaPredicted RBP17.42■□□□□ 0.38
CALD1-207ENST00000430085 TNNI3KQ59H18 835 aa17.42■□□□□ 0.38
CALD1-207ENST00000430085 FPGT-TNNI3KV9GXZ4 949 aa17.42■□□□□ 0.38
CALD1-207ENST00000430085 IL15P40933 162 aaPredicted RBP17.41■□□□□ 0.38
CALD1-207ENST00000430085 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
CALD1-207ENST00000430085 ZNF34Q8IZ26 560 aa17.41■□□□□ 0.38
CALD1-207ENST00000430085 TLR7Q9NYK1 1049 aaKnown RBP17.41■□□□□ 0.38
CALD1-207ENST00000430085 HSCBQ8IWL3 235 aa17.41■□□□□ 0.38
CALD1-207ENST00000430085 LINC00116Q8NCU8 138 aa17.41■□□□□ 0.38
CALD1-207ENST00000430085 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
CALD1-207ENST00000430085 EYA2O00167 538 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms