RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RNF123Q5XPI4 1314 aa19.52■□□□□ 0.72
MSH5-208ENST00000429846 ZNF541Q9H0D2 1346 aa19.52■□□□□ 0.72
MSH5-208ENST00000429846 ADAMTSL1Q8N6G6 1762 aa19.52■□□□□ 0.72
MSH5-208ENST00000429846 FZD9O00144 591 aa19.52■□□□□ 0.72
MSH5-208ENST00000429846 PDIA6Q15084 440 aa19.52■□□□□ 0.72
MSH5-208ENST00000429846 SYNE4Q8N205 404 aa19.52■□□□□ 0.72
MSH5-208ENST00000429846 CRAMP1Q96RY5 1269 aa19.52■□□□□ 0.72
MSH5-208ENST00000429846 TAF1DQ9H5J8 278 aaPredicted RBP19.52■□□□□ 0.72
MSH5-208ENST00000429846 CREBZFQ9NS37 354 aa19.52■□□□□ 0.72
MSH5-208ENST00000429846 POTEIP0CG38 1075 aa19.51■□□□□ 0.71
MSH5-208ENST00000429846 POTEJP0CG39 1038 aa19.51■□□□□ 0.71
MSH5-208ENST00000429846 EIF2S2P20042 333 aaKnown RBP19.51■□□□□ 0.71
MSH5-208ENST00000429846 JDP2Q8WYK2 163 aa19.51■□□□□ 0.71
MSH5-208ENST00000429846 RBM17Q96I25 401 aaKnown RBP19.51■□□□□ 0.71
MSH5-208ENST00000429846 HSP90AB3PQ58FF7 597 aa19.5■□□□□ 0.71
MSH5-208ENST00000429846 GPC2Q8N158 579 aa19.5■□□□□ 0.71
MSH5-208ENST00000429846 HACL1Q9UJ83 578 aa19.5■□□□□ 0.71
MSH5-208ENST00000429846 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
MSH5-208ENST00000429846 WDR43Q15061 677 aaKnown RBP eCLIP19.49■□□□□ 0.71
MSH5-208ENST00000429846 RUNDC1Q96C34 613 aa19.49■□□□□ 0.71
MSH5-208ENST00000429846 NLRP3Q96P20 1036 aa19.49■□□□□ 0.71
MSH5-208ENST00000429846 UTP14AQ9BVJ6 771 aaKnown RBP19.49■□□□□ 0.71
MSH5-208ENST00000429846 LAMB2P55268 1798 aa19.48■□□□□ 0.71
MSH5-208ENST00000429846 PPEF1O14829 653 aaPredicted RBP19.48■□□□□ 0.71
MSH5-208ENST00000429846 PROSER3Q2NL68 480 aa19.48■□□□□ 0.71
MSH5-208ENST00000429846 PNMA8AQ86V59 439 aaPredicted RBP19.48■□□□□ 0.71
MSH5-208ENST00000429846 PASKQ96RG2 1323 aa19.48■□□□□ 0.71
MSH5-208ENST00000429846 CHL1O00533 1208 aa19.47■□□□□ 0.71
MSH5-208ENST00000429846 EPHX2P34913 555 aa19.47■□□□□ 0.71
MSH5-208ENST00000429846 EIF6P56537 245 aaKnown RBP19.47■□□□□ 0.71
MSH5-208ENST00000429846 SLC10A5Q5PT55 438 aa19.47■□□□□ 0.71
MSH5-208ENST00000429846 TMX4Q9H1E5 349 aaPredicted RBP19.47■□□□□ 0.71
MSH5-208ENST00000429846 COL4A5P29400 1685 aa19.46■□□□□ 0.71
MSH5-208ENST00000429846 HOXB7P09629 217 aa19.46■□□□□ 0.71
MSH5-208ENST00000429846 EAPPQ56P03 285 aaPredicted RBP19.46■□□□□ 0.71
MSH5-208ENST00000429846 CCDC146Q8IYE0 955 aa19.46■□□□□ 0.71
MSH5-208ENST00000429846 DDX21Q9NR30 783 aaKnown RBP eCLIP19.46■□□□□ 0.71
MSH5-208ENST00000429846 ANXA1P04083 346 aa19.45■□□□□ 0.7
MSH5-208ENST00000429846 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
MSH5-208ENST00000429846 COPS6Q7L5N1 327 aa19.45■□□□□ 0.7
MSH5-208ENST00000429846 LARGE2Q8N3Y3 721 aa19.45■□□□□ 0.7
MSH5-208ENST00000429846 HSPA1AP0DMV8 641 aaKnown RBP19.44■□□□□ 0.7
MSH5-208ENST00000429846 HSPA1BP0DMV9 641 aaKnown RBP19.44■□□□□ 0.7
MSH5-208ENST00000429846 C3orf67Q6ZVT6 689 aa19.44■□□□□ 0.7
MSH5-208ENST00000429846 XAGE3Q8WTP9 111 aa19.44■□□□□ 0.7
MSH5-208ENST00000429846 VPS33BQ9H267 617 aa19.44■□□□□ 0.7
MSH5-208ENST00000429846 TRIM35Q9UPQ4 493 aa19.44■□□□□ 0.7
MSH5-208ENST00000429846 ITGBL1O95965 494 aaPredicted RBP19.43■□□□□ 0.7
MSH5-208ENST00000429846 AIMP1Q12904 312 aaKnown RBP19.43■□□□□ 0.7
MSH5-208ENST00000429846 COL13A1Q5TAT6 717 aaPredicted RBP19.43■□□□□ 0.7
MSH5-208ENST00000429846 NLRP10Q86W26 655 aa19.43■□□□□ 0.7
MSH5-208ENST00000429846 ATP6V0A2Q9Y487 856 aa19.43■□□□□ 0.7
MSH5-208ENST00000429846 ABCC4O15439 1325 aa19.43■□□□□ 0.7
MSH5-208ENST00000429846 CNTNAP1P78357 1384 aa19.43■□□□□ 0.7
MSH5-208ENST00000429846 LMOD1P29536 600 aaPredicted RBP19.42■□□□□ 0.7
MSH5-208ENST00000429846 TCIRG1Q13488 830 aa19.42■□□□□ 0.7
MSH5-208ENST00000429846 NIM1KQ8IY84 436 aa19.42■□□□□ 0.7
MSH5-208ENST00000429846 SUPT20HQ8NEM7 779 aa19.42■□□□□ 0.7
MSH5-208ENST00000429846 NECTIN2Q92692 538 aa19.42■□□□□ 0.7
MSH5-208ENST00000429846 MKRN1Q9UHC7 482 aaKnown RBP19.42■□□□□ 0.7
MSH5-208ENST00000429846 CLEC11AQ9Y240 323 aa19.42■□□□□ 0.7
MSH5-208ENST00000429846 SH3TC1Q8TE82 1336 aa19.42■□□□□ 0.7
MSH5-208ENST00000429846 PCNTO95613 3336 aa19.42■□□□□ 0.7
MSH5-208ENST00000429846 LTBP1Q14766 1721 aa19.42■□□□□ 0.7
MSH5-208ENST00000429846 TMEM88BA6NKF7 163 aa19.41■□□□□ 0.7
MSH5-208ENST00000429846 HDGFL1Q5TGJ6 251 aa19.41■□□□□ 0.7
MSH5-208ENST00000429846 CHPF2Q9P2E5 772 aa19.41■□□□□ 0.7
MSH5-208ENST00000429846 TRMT112Q9UI30 125 aaKnown RBP19.41■□□□□ 0.7
MSH5-208ENST00000429846 ADAMTS8Q9UP79 889 aa19.41■□□□□ 0.7
MSH5-208ENST00000429846 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
MSH5-208ENST00000429846 DDX60Q8IY21 1712 aaKnown RBP19.4■□□□□ 0.7
MSH5-208ENST00000429846 TCERG1O14776 1098 aaKnown RBP19.4■□□□□ 0.7
MSH5-208ENST00000429846 PPIP5K2O43314 1243 aa19.4■□□□□ 0.7
MSH5-208ENST00000429846 BBOX1O75936 387 aa19.4■□□□□ 0.7
MSH5-208ENST00000429846 KRT24Q2M2I5 525 aa19.4■□□□□ 0.7
MSH5-208ENST00000429846 CFAP44Q96MT7 982 aa19.4■□□□□ 0.7
MSH5-208ENST00000429846 RTFDC1Q9BY42 306 aaPredicted RBP19.4■□□□□ 0.7
MSH5-208ENST00000429846 DBF4Q9UBU7 674 aaPredicted RBP19.4■□□□□ 0.7
MSH5-208ENST00000429846 GJA3Q9Y6H8 435 aa19.4■□□□□ 0.7
MSH5-208ENST00000429846 LRRC37AA6NMS7 1700 aa19.39■□□□□ 0.7
MSH5-208ENST00000429846 SP8Q8IXZ3 490 aa19.39■□□□□ 0.69
MSH5-208ENST00000429846 PLBD2Q8NHP8 589 aa19.39■□□□□ 0.69
MSH5-208ENST00000429846 PRKRIP1Q9H875 184 aaPredicted RBP19.39■□□□□ 0.69
MSH5-208ENST00000429846 SCNN1DP51172 638 aa19.38■□□□□ 0.69
MSH5-208ENST00000429846 DDX46Q7L014 1031 aaKnown RBP19.38■□□□□ 0.69
MSH5-208ENST00000429846 TMC4Q7Z404 712 aa19.38■□□□□ 0.69
MSH5-208ENST00000429846 CNTROBQ8N137 903 aa19.38■□□□□ 0.69
MSH5-208ENST00000429846 HCLS1P14317 486 aaPredicted RBP19.37■□□□□ 0.69
MSH5-208ENST00000429846 GRAPQ13588 217 aa19.37■□□□□ 0.69
MSH5-208ENST00000429846 AOC3Q16853 763 aa19.37■□□□□ 0.69
MSH5-208ENST00000429846 MAP1SQ66K74 1059 aaPredicted RBP19.37■□□□□ 0.69
MSH5-208ENST00000429846 DPP8Q6V1X1 898 aaPredicted RBP19.37■□□□□ 0.69
MSH5-208ENST00000429846 SLC51AQ86UW1 340 aa19.37■□□□□ 0.69
MSH5-208ENST00000429846 TNS4Q8IZW8 715 aa19.37■□□□□ 0.69
MSH5-208ENST00000429846 GRAPLQ8TC17 118 aaPredicted RBP19.37■□□□□ 0.69
MSH5-208ENST00000429846 HYPKQ9NX55 129 aa19.37■□□□□ 0.69
MSH5-208ENST00000429846 ANKRD13DQ6ZTN6 518 aa19.36■□□□□ 0.69
MSH5-208ENST00000429846 USP50Q70EL3 339 aaPredicted RBP19.36■□□□□ 0.69
MSH5-208ENST00000429846 MPNDQ8N594 471 aa19.36■□□□□ 0.69
MSH5-208ENST00000429846 TAF1P21675 1872 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms