RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 IGKV5-2P06315 115 aa28.41■■■□□ 2.14
PTPN18-205ENST00000428843 ERFEQ4G0M1 354 aa28.41■■■□□ 2.14
PTPN18-205ENST00000428843 NOB1Q9ULX3 412 aaKnown RBP28.41■■■□□ 2.14
PTPN18-205ENST00000428843 CCDC191Q8NCU4 936 aa28.4■■■□□ 2.14
PTPN18-205ENST00000428843 BRIP1Q9BX63 1249 aa28.4■■■□□ 2.14
PTPN18-205ENST00000428843 TRMT112Q9UI30 125 aaKnown RBP28.4■■■□□ 2.14
PTPN18-205ENST00000428843 PXDNLA1KZ92 1463 aa28.4■■■□□ 2.14
PTPN18-205ENST00000428843 ABCC12Q96J65 1359 aa28.39■■■□□ 2.14
PTPN18-205ENST00000428843 TGFB2P61812 414 aa28.39■■■□□ 2.14
PTPN18-205ENST00000428843 KIF16BQ96L93 1317 aa28.39■■■□□ 2.13
PTPN18-205ENST00000428843 CWF19L2Q2TBE0 894 aaKnown RBP28.38■■■□□ 2.13
PTPN18-205ENST00000428843 CWC25Q9NXE8 425 aaPredicted RBP28.38■■■□□ 2.13
PTPN18-205ENST00000428843 RNF123Q5XPI4 1314 aa28.38■■■□□ 2.13
PTPN18-205ENST00000428843 NEURL1BA8MQ27 555 aa28.37■■■□□ 2.13
PTPN18-205ENST00000428843 SLC4A10Q6U841 1118 aa28.37■■■□□ 2.13
PTPN18-205ENST00000428843 LINS1Q8NG48 757 aa28.37■■■□□ 2.13
PTPN18-205ENST00000428843 TNRC6CQ9HCJ0 1690 aaKnown RBP28.36■■■□□ 2.13
PTPN18-205ENST00000428843 A0A0G2JLW4 131 aa28.36■■■□□ 2.13
PTPN18-205ENST00000428843 DPEP1P16444 411 aa28.36■■■□□ 2.13
PTPN18-205ENST00000428843 BEND3Q5T5X7 828 aa28.36■■■□□ 2.13
PTPN18-205ENST00000428843 SYNE4Q8N205 404 aa28.36■■■□□ 2.13
PTPN18-205ENST00000428843 SH3TC1Q8TE82 1336 aa28.36■■■□□ 2.13
PTPN18-205ENST00000428843 CHRNA5P30532 468 aa28.35■■■□□ 2.13
PTPN18-205ENST00000428843 PDE6BP35913 854 aa28.35■■■□□ 2.13
PTPN18-205ENST00000428843 FAM89AQ96GI7 184 aa28.35■■■□□ 2.13
PTPN18-205ENST00000428843 COL11A2P13942 1736 aaPredicted RBP28.35■■■□□ 2.13
PTPN18-205ENST00000428843 C2CD5Q86YS7 1000 aa28.34■■■□□ 2.13
PTPN18-205ENST00000428843 ZBTB38Q8NAP3 1195 aaPredicted RBP28.34■■■□□ 2.13
PTPN18-205ENST00000428843 RIC1Q4ADV7 1423 aa28.34■■■□□ 2.13
PTPN18-205ENST00000428843 DLEC1Q9Y238 1755 aa28.33■■■□□ 2.13
PTPN18-205ENST00000428843 RTL5Q5HYW3 569 aaPredicted RBP28.33■■■□□ 2.13
PTPN18-205ENST00000428843 SLC10A5Q5PT55 438 aa28.33■■■□□ 2.13
PTPN18-205ENST00000428843 ARHGAP45Q92619 1136 aa28.33■■■□□ 2.13
PTPN18-205ENST00000428843 FRAT1Q92837 279 aaPredicted RBP28.33■■■□□ 2.13
PTPN18-205ENST00000428843 API5Q9BZZ5 524 aaKnown RBP28.33■■■□□ 2.13
PTPN18-205ENST00000428843 DDX60Q8IY21 1712 aaKnown RBP28.32■■■□□ 2.12
PTPN18-205ENST00000428843 PCCAP05165 728 aaPredicted RBP28.32■■■□□ 2.12
PTPN18-205ENST00000428843 KCNA3P22001 575 aa28.32■■■□□ 2.12
PTPN18-205ENST00000428843 GCKRQ14397 625 aa28.32■■■□□ 2.12
PTPN18-205ENST00000428843 RCAN3Q9UKA8 241 aa28.32■■■□□ 2.12
PTPN18-205ENST00000428843 BRCA1P38398 1863 aaKnown RBP28.32■■■□□ 2.12
PTPN18-205ENST00000428843 H0YIN7 160 aa28.31■■■□□ 2.12
PTPN18-205ENST00000428843 IPO8O15397 1037 aaKnown RBP28.31■■■□□ 2.12
PTPN18-205ENST00000428843 HCLS1P14317 486 aaPredicted RBP28.31■■■□□ 2.12
PTPN18-205ENST00000428843 JARID2Q92833 1246 aaPredicted RBP28.31■■■□□ 2.12
PTPN18-205ENST00000428843 PDZRN3Q9UPQ7 1066 aa28.31■■■□□ 2.12
PTPN18-205ENST00000428843 LAMB2P55268 1798 aa28.3■■■□□ 2.12
PTPN18-205ENST00000428843 KLRG2A4D1S0 409 aaPredicted RBP28.3■■■□□ 2.12
PTPN18-205ENST00000428843 SRCIN1Q9C0H9 1055 aa28.3■■■□□ 2.12
PTPN18-205ENST00000428843 WWC3Q9ULE0 1092 aa28.29■■■□□ 2.12
PTPN18-205ENST00000428843 IRS4O14654 1257 aaPredicted RBP28.28■■■□□ 2.12
PTPN18-205ENST00000428843 ALDH1L1O75891 902 aa28.28■■■□□ 2.12
PTPN18-205ENST00000428843 ATF7IPQ6VMQ6 1270 aa28.28■■■□□ 2.12
PTPN18-205ENST00000428843 C3orf67Q6ZVT6 689 aa28.28■■■□□ 2.12
PTPN18-205ENST00000428843 H7C1W4 665 aa28.27■■■□□ 2.12
PTPN18-205ENST00000428843 SRGNP10124 158 aa28.27■■■□□ 2.12
PTPN18-205ENST00000428843 ZKSCAN2Q63HK3 967 aa28.27■■■□□ 2.12
PTPN18-205ENST00000428843 NLRP3Q96P20 1036 aa28.27■■■□□ 2.12
PTPN18-205ENST00000428843 TNNQ9UQP3 1299 aa28.27■■■□□ 2.12
PTPN18-205ENST00000428843 TRIM27P14373 513 aa28.26■■■□□ 2.11
PTPN18-205ENST00000428843 CRY2Q49AN0 593 aa28.26■■■□□ 2.11
PTPN18-205ENST00000428843 ZNF622Q969S3 477 aaKnown RBP eCLIP28.26■■■□□ 2.11
PTPN18-205ENST00000428843 PIM2Q9P1W9 311 aa28.26■■■□□ 2.11
PTPN18-205ENST00000428843 CDHR2Q9BYE9 1310 aa28.25■■■□□ 2.11
PTPN18-205ENST00000428843 UBE3BQ7Z3V4 1068 aa28.25■■■□□ 2.11
PTPN18-205ENST00000428843 MASTLQ96GX5 879 aa28.25■■■□□ 2.11
PTPN18-205ENST00000428843 ABCC4O15439 1325 aa28.24■■■□□ 2.11
PTPN18-205ENST00000428843 STYK1Q6J9G0 422 aa28.24■■■□□ 2.11
PTPN18-205ENST00000428843 CACNA1SQ13698 1873 aa28.23■■■□□ 2.11
PTPN18-205ENST00000428843 NPR1P16066 1061 aa28.23■■■□□ 2.11
PTPN18-205ENST00000428843 CCT4P50991 539 aaKnown RBP28.23■■■□□ 2.11
PTPN18-205ENST00000428843 CASP7P55210 303 aa28.23■■■□□ 2.11
PTPN18-205ENST00000428843 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
PTPN18-205ENST00000428843 GRM8O00222 908 aa28.22■■■□□ 2.11
PTPN18-205ENST00000428843 PDE8AO60658 829 aa28.22■■■□□ 2.11
PTPN18-205ENST00000428843 HSP90B1P14625 803 aaKnown RBP28.22■■■□□ 2.11
PTPN18-205ENST00000428843 CLUAP1Q96AJ1 413 aa28.22■■■□□ 2.11
PTPN18-205ENST00000428843 RPGRQ92834 1020 aaKnown RBP28.21■■■□□ 2.11
PTPN18-205ENST00000428843 C9orf78Q9NZ63 289 aaPredicted RBP28.21■■■□□ 2.11
PTPN18-205ENST00000428843 MYH3P11055 1940 aa28.21■■■□□ 2.11
PTPN18-205ENST00000428843 YBX3P16989 372 aaKnown RBP eCLIP28.2■■■□□ 2.1
PTPN18-205ENST00000428843 GPR162Q16538 588 aa28.2■■■□□ 2.1
PTPN18-205ENST00000428843 DALRD3Q5D0E6 543 aaKnown RBP28.2■■■□□ 2.1
PTPN18-205ENST00000428843 TTLL6Q8N841 843 aa28.2■■■□□ 2.1
PTPN18-205ENST00000428843 BCS1LQ9Y276 419 aa28.2■■■□□ 2.1
PTPN18-205ENST00000428843 SF3B3Q15393 1217 aaKnown RBP28.19■■■□□ 2.1
PTPN18-205ENST00000428843 INTS3Q68E01 1043 aaKnown RBP28.19■■■□□ 2.1
PTPN18-205ENST00000428843 CNKSR1Q969H4 720 aa28.19■■■□□ 2.1
PTPN18-205ENST00000428843 SLX4Q8IY92 1834 aa28.18■■■□□ 2.1
PTPN18-205ENST00000428843 ARFGEF1Q9Y6D6 1849 aa28.18■■■□□ 2.1
PTPN18-205ENST00000428843 HOXA10P31260 410 aaPredicted RBP28.18■■■□□ 2.1
PTPN18-205ENST00000428843 RBM17Q96I25 401 aaKnown RBP28.18■■■□□ 2.1
PTPN18-205ENST00000428843 PLA2G12BQ9BX93 195 aa28.17■■■□□ 2.1
PTPN18-205ENST00000428843 UTYO14607 1347 aa28.17■■■□□ 2.1
PTPN18-205ENST00000428843 NBPF7P0C2Y1 421 aaPredicted RBP28.16■■■□□ 2.1
PTPN18-205ENST00000428843 CTSWP56202 376 aa28.16■■■□□ 2.1
PTPN18-205ENST00000428843 DZIP1LQ8IYY4 767 aaKnown RBP28.16■■■□□ 2.1
PTPN18-205ENST00000428843 USP44Q9H0E7 712 aa28.16■■■□□ 2.1
PTPN18-205ENST00000428843 TAF1P21675 1872 aa28.15■■■□□ 2.1
PTPN18-205ENST00000428843 PLIN1O60240 522 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms