RNA–Protein interactions for RNA: ENST00000428595.1

UBAP2L-206, Transcript of ubiquitin associated protein 2 like, humanhuman

TSL 1 (best)

Gene UBAP2L, Length 1,419 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2L-206ENST00000428595 IBTKQ9P2D0 1353 aaPredicted RBP15.12■□□□□ 0.01
UBAP2L-206ENST00000428595 PRKCSHP14314 528 aaPredicted RBP15.12■□□□□ 0.01
UBAP2L-206ENST00000428595 CRY2Q49AN0 593 aa15.12■□□□□ 0.01
UBAP2L-206ENST00000428595 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
UBAP2L-206ENST00000428595 NYXQ9GZU5 481 aa15.12■□□□□ 0.01
UBAP2L-206ENST00000428595 HOXB7P09629 217 aa15.11■□□□□ 0.01
UBAP2L-206ENST00000428595 GNAI1P63096 354 aa15.11■□□□□ 0.01
UBAP2L-206ENST00000428595 TSPYL6Q8N831 410 aa15.11■□□□□ 0.01
UBAP2L-206ENST00000428595 RIC1Q4ADV7 1423 aa15.11■□□□□ 0.01
UBAP2L-206ENST00000428595 NLRP10Q86W26 655 aa15.1■□□□□ 0.01
UBAP2L-206ENST00000428595 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
UBAP2L-206ENST00000428595 TCIRG1Q13488 830 aa15.09■□□□□ 0.01
UBAP2L-206ENST00000428595 PARP10Q53GL7 1025 aa15.09■□□□□ 0.01
UBAP2L-206ENST00000428595 UTP14AQ9BVJ6 771 aaKnown RBP15.09■□□□□ 0.01
UBAP2L-206ENST00000428595 TAOK3Q9H2K8 898 aa15.09■□□□□ 0.01
UBAP2L-206ENST00000428595 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
UBAP2L-206ENST00000428595 RRAGCQ9HB90 399 aa15.09■□□□□ 0.01
UBAP2L-206ENST00000428595 DBF4Q9UBU7 674 aaPredicted RBP15.09■□□□□ 0.01
UBAP2L-206ENST00000428595 SALL2Q9Y467 1007 aaPredicted RBP15.09■□□□□ 0.01
UBAP2L-206ENST00000428595 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
UBAP2L-206ENST00000428595 DDX60Q8IY21 1712 aaKnown RBP15.08■□□□□ 0.01
UBAP2L-206ENST00000428595 LTBP3Q9NS15 1303 aa15.08■□□□□ 0.01
UBAP2L-206ENST00000428595 ATP5J2-PTCD1G3V325 749 aa15.08■□□□□ 0
UBAP2L-206ENST00000428595 HCLS1P14317 486 aaPredicted RBP15.08■□□□□ 0
UBAP2L-206ENST00000428595 HOXA10P31260 410 aaPredicted RBP15.08■□□□□ 0
UBAP2L-206ENST00000428595 CALD1Q05682 793 aaKnown RBP15.08■□□□□ 0
UBAP2L-206ENST00000428595 CCDC93Q567U6 631 aa15.08■□□□□ 0
UBAP2L-206ENST00000428595 ANKRD13DQ6ZTN6 518 aa15.08■□□□□ 0
UBAP2L-206ENST00000428595 PPP1R42Q7Z4L9 355 aa15.08■□□□□ 0
UBAP2L-206ENST00000428595 PLBD2Q8NHP8 589 aa15.08■□□□□ 0
UBAP2L-206ENST00000428595 KDM2BQ8NHM5 1336 aa15.08■□□□□ 0
UBAP2L-206ENST00000428595 GLTPD2A6NH11 291 aa15.07■□□□□ 0
UBAP2L-206ENST00000428595 TCERG1O14776 1098 aaKnown RBP15.07■□□□□ 0
UBAP2L-206ENST00000428595 CCDC27Q2M243 656 aa15.07■□□□□ 0
UBAP2L-206ENST00000428595 ZNF277Q9NRM2 450 aaPredicted RBP15.07■□□□□ 0
UBAP2L-206ENST00000428595 HYPKQ9NX55 129 aa15.07■□□□□ 0
UBAP2L-206ENST00000428595 ZC3H4Q9UPT8 1303 aaKnown RBP15.07■□□□□ 0
UBAP2L-206ENST00000428595 PCNTO95613 3336 aa15.06■□□□□ 0
UBAP2L-206ENST00000428595 COL4A1P02462 1669 aa15.06■□□□□ 0
UBAP2L-206ENST00000428595 ALDH1B1P30837 517 aa15.06■□□□□ 0
UBAP2L-206ENST00000428595 HSP90AB3PQ58FF7 597 aa15.06■□□□□ 0
UBAP2L-206ENST00000428595 SLC10A5Q5PT55 438 aa15.06■□□□□ 0
UBAP2L-206ENST00000428595 RPGRQ92834 1020 aaKnown RBP15.06■□□□□ 0
UBAP2L-206ENST00000428595 ISCA1Q9BUE6 129 aa15.06■□□□□ 0
UBAP2L-206ENST00000428595 TRMT112Q9UI30 125 aaKnown RBP15.06■□□□□ 0
UBAP2L-206ENST00000428595 COL4A5P29400 1685 aa15.05■□□□□ 0
UBAP2L-206ENST00000428595 POTECB2RU33 542 aa15.05■□□□□ -0
UBAP2L-206ENST00000428595 TOMM70O94826 608 aa15.05■□□□□ -0
UBAP2L-206ENST00000428595 FKBP4Q02790 459 aaKnown RBP eCLIP15.05■□□□□ -0
UBAP2L-206ENST00000428595 SOGA3Q5TF21 947 aa15.05■□□□□ -0
UBAP2L-206ENST00000428595 FAM9BQ8IZU0 186 aa15.05■□□□□ -0
UBAP2L-206ENST00000428595 RTL5Q5HYW3 569 aaPredicted RBP15.04■□□□□ -0
UBAP2L-206ENST00000428595 NLRP3Q96P20 1036 aa15.04■□□□□ -0
UBAP2L-206ENST00000428595 CRAMP1Q96RY5 1269 aa15.04■□□□□ -0
UBAP2L-206ENST00000428595 WDR90Q96KV7 1748 aa15.04■□□□□ -0
UBAP2L-206ENST00000428595 ABCC4O15439 1325 aa15.03■□□□□ -0
UBAP2L-206ENST00000428595 SH3TC1Q8TE82 1336 aa15.03■□□□□ -0
UBAP2L-206ENST00000428595 DDNO94850 711 aaPredicted RBP15.03■□□□□ -0
UBAP2L-206ENST00000428595 HSPA6P17066 643 aa15.03■□□□□ -0
UBAP2L-206ENST00000428595 FAM89AQ96GI7 184 aa15.03■□□□□ -0
UBAP2L-206ENST00000428595 RBM17Q96I25 401 aaKnown RBP15.03■□□□□ -0
UBAP2L-206ENST00000428595 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
UBAP2L-206ENST00000428595 ZNF541Q9H0D2 1346 aa15.02■□□□□ -0
UBAP2L-206ENST00000428595 FANCIQ9NVI1 1328 aa15.02■□□□□ -0
UBAP2L-206ENST00000428595 PPEF1O14829 653 aaPredicted RBP15.02■□□□□ -0
UBAP2L-206ENST00000428595 RTKN2Q8IZC4 609 aa15.02■□□□□ -0
UBAP2L-206ENST00000428595 IL16Q14005 1332 aa15.02□□□□□ -0.01
UBAP2L-206ENST00000428595 RNF123Q5XPI4 1314 aa15.02□□□□□ -0.01
UBAP2L-206ENST00000428595 CCDC30Q5VVM6 783 aa15.01□□□□□ -0.01
UBAP2L-206ENST00000428595 G2E3Q7L622 706 aa15.01□□□□□ -0.01
UBAP2L-206ENST00000428595 RIC3Q7Z5B4 369 aa15.01□□□□□ -0.01
UBAP2L-206ENST00000428595 RBM46Q8TBY0 533 aaKnown RBP15.01□□□□□ -0.01
UBAP2L-206ENST00000428595 JARID2Q92833 1246 aaPredicted RBP15.01□□□□□ -0.01
UBAP2L-206ENST00000428595 GOLGA2Q08379 1002 aa15□□□□□ -0.01
UBAP2L-206ENST00000428595 TWISTNBQ3B726 338 aaPredicted RBP15□□□□□ -0.01
UBAP2L-206ENST00000428595 C16orf71Q8IYS4 520 aaPredicted RBP15□□□□□ -0.01
UBAP2L-206ENST00000428595 MYD88Q99836 296 aa15□□□□□ -0.01
UBAP2L-206ENST00000428595 CACNA1FO60840 1977 aa15□□□□□ -0.01
UBAP2L-206ENST00000428595 VEGFAP15692 232 aaPredicted RBP15□□□□□ -0.01
UBAP2L-206ENST00000428595 IARSP41252 1262 aaKnown RBP15□□□□□ -0.01
UBAP2L-206ENST00000428595 TRIM28Q13263 835 aaKnown RBP15□□□□□ -0.01
UBAP2L-206ENST00000428595 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
UBAP2L-206ENST00000428595 PSMD1Q99460 953 aa15□□□□□ -0.01
UBAP2L-206ENST00000428595 HTRA3P83110 453 aa14.99□□□□□ -0.01
UBAP2L-206ENST00000428595 DPY19L2Q6NUT2 758 aa14.99□□□□□ -0.01
UBAP2L-206ENST00000428595 PI4KAP2A4QPH2 592 aa14.98□□□□□ -0.01
UBAP2L-206ENST00000428595 POTEIP0CG38 1075 aa14.98□□□□□ -0.01
UBAP2L-206ENST00000428595 POTEJP0CG39 1038 aa14.98□□□□□ -0.01
UBAP2L-206ENST00000428595 EXOSC9Q06265 439 aaKnown RBP14.98□□□□□ -0.01
UBAP2L-206ENST00000428595 WDR63Q8IWG1 891 aa14.98□□□□□ -0.01
UBAP2L-206ENST00000428595 PI4KAP1Q8N8J0 262 aa14.98□□□□□ -0.01
UBAP2L-206ENST00000428595 METTL22Q9BUU2 404 aaPredicted RBP14.98□□□□□ -0.01
UBAP2L-206ENST00000428595 MAP3K2Q9Y2U5 619 aa14.98□□□□□ -0.01
UBAP2L-206ENST00000428595 ATP6V0A2Q9Y487 856 aa14.98□□□□□ -0.01
UBAP2L-206ENST00000428595 LRRC37AA6NMS7 1700 aa14.97□□□□□ -0.01
UBAP2L-206ENST00000428595 IRS4O14654 1257 aaPredicted RBP14.97□□□□□ -0.01
UBAP2L-206ENST00000428595 CC2D2BQ6DHV5 1058 aa14.97□□□□□ -0.01
UBAP2L-206ENST00000428595 SCN4AP35499 1836 aa14.96□□□□□ -0.01
UBAP2L-206ENST00000428595 DUOX1Q9NRD9 1551 aa14.96□□□□□ -0.01
UBAP2L-206ENST00000428595 FZD9O00144 591 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms