RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 PTPN12Q05209 780 aaKnown RBP26.54■■□□□ 1.84
CNEP1R1-202ENST00000427478 LMBR1LQ6UX01 489 aa26.54■■□□□ 1.84
CNEP1R1-202ENST00000427478 KIF6Q6ZMV9 814 aa26.54■■□□□ 1.84
CNEP1R1-202ENST00000427478 CCDC8Q9H0W5 538 aaPredicted RBP26.54■■□□□ 1.84
CNEP1R1-202ENST00000427478 FOXO4P98177 505 aa26.53■■□□□ 1.84
CNEP1R1-202ENST00000427478 A0A0G2JS52 829 aa26.53■■□□□ 1.84
CNEP1R1-202ENST00000427478 ANO2Q9NQ90 1003 aa26.53■■□□□ 1.84
CNEP1R1-202ENST00000427478 CHMP3Q9Y3E7 222 aa26.53■■□□□ 1.84
CNEP1R1-202ENST00000427478 ARXQ96QS3 562 aa26.52■■□□□ 1.84
CNEP1R1-202ENST00000427478 TLR7Q9NYK1 1049 aaKnown RBP26.52■■□□□ 1.84
CNEP1R1-202ENST00000427478 CYP19A1P11511 503 aaPredicted RBP26.51■■□□□ 1.84
CNEP1R1-202ENST00000427478 ISCA1Q9BUE6 129 aa26.51■■□□□ 1.84
CNEP1R1-202ENST00000427478 K7ELQ4 463 aaPredicted RBP26.51■■□□□ 1.83
CNEP1R1-202ENST00000427478 TCIRG1Q13488 830 aa26.51■■□□□ 1.83
CNEP1R1-202ENST00000427478 IL25Q9H293 177 aa26.51■■□□□ 1.83
CNEP1R1-202ENST00000427478 FRAT2O75474 233 aaPredicted RBP26.5■■□□□ 1.83
CNEP1R1-202ENST00000427478 MARCH10Q8NA82 808 aaPredicted RBP26.5■■□□□ 1.83
CNEP1R1-202ENST00000427478 ACSBG1Q96GR2 724 aa26.5■■□□□ 1.83
CNEP1R1-202ENST00000427478 ANKRD36CQ5JPF3 1778 aa26.48■■□□□ 1.83
CNEP1R1-202ENST00000427478 BARGINQ6ZT62 677 aa26.48■■□□□ 1.83
CNEP1R1-202ENST00000427478 ZBTB1Q9Y2K1 713 aa26.48■■□□□ 1.83
CNEP1R1-202ENST00000427478 MAP3K15Q6ZN16 1313 aa26.48■■□□□ 1.83
CNEP1R1-202ENST00000427478 TFCP2Q12800 502 aa26.47■■□□□ 1.83
CNEP1R1-202ENST00000427478 MCCP23508 829 aa26.47■■□□□ 1.83
CNEP1R1-202ENST00000427478 CHMP5Q9NZZ3 219 aa26.46■■□□□ 1.83
CNEP1R1-202ENST00000427478 SGSM2O43147 1006 aa26.45■■□□□ 1.82
CNEP1R1-202ENST00000427478 TNNI3KQ59H18 835 aa26.45■■□□□ 1.82
CNEP1R1-202ENST00000427478 C8orf37Q96NL8 207 aa26.45■■□□□ 1.82
CNEP1R1-202ENST00000427478 FPGT-TNNI3KV9GXZ4 949 aa26.45■■□□□ 1.82
CNEP1R1-202ENST00000427478 HSP90AA1P07900 732 aaKnown RBP26.44■■□□□ 1.82
CNEP1R1-202ENST00000427478 NUP98P52948 1817 aa26.44■■□□□ 1.82
CNEP1R1-202ENST00000427478 TRIM28Q13263 835 aaKnown RBP26.44■■□□□ 1.82
CNEP1R1-202ENST00000427478 HLFQ16534 295 aa26.44■■□□□ 1.82
CNEP1R1-202ENST00000427478 CWC27Q6UX04 472 aaKnown RBP26.44■■□□□ 1.82
CNEP1R1-202ENST00000427478 GIGYF2Q6Y7W6 1299 aaKnown RBP26.44■■□□□ 1.82
CNEP1R1-202ENST00000427478 EVI5LQ96CN4 794 aa26.44■■□□□ 1.82
CNEP1R1-202ENST00000427478 DIAPH3Q9NSV4 1193 aa26.43■■□□□ 1.82
CNEP1R1-202ENST00000427478 FOXD4L1Q9NU39 408 aa26.43■■□□□ 1.82
CNEP1R1-202ENST00000427478 PALD1Q9ULE6 856 aa26.43■■□□□ 1.82
CNEP1R1-202ENST00000427478 JCADQ9P266 1359 aa26.43■■□□□ 1.82
CNEP1R1-202ENST00000427478 BOLA2Q9H3K6 86 aa26.42■■□□□ 1.82
CNEP1R1-202ENST00000427478 ST18O60284 1047 aa26.42■■□□□ 1.82
CNEP1R1-202ENST00000427478 DDIT3P35638 169 aa26.42■■□□□ 1.82
CNEP1R1-202ENST00000427478 DBNLQ9UJU6 430 aaKnown RBP26.42■■□□□ 1.82
CNEP1R1-202ENST00000427478 NGLY1Q96IV0 654 aa26.41■■□□□ 1.82
CNEP1R1-202ENST00000427478 GPTP24298 496 aa26.41■■□□□ 1.82
CNEP1R1-202ENST00000427478 FAM98CQ17RN3 349 aaKnown RBP26.41■■□□□ 1.82
CNEP1R1-202ENST00000427478 FAM89AQ96GI7 184 aa26.41■■□□□ 1.82
CNEP1R1-202ENST00000427478 PCCAP05165 728 aaPredicted RBP26.4■■□□□ 1.82
CNEP1R1-202ENST00000427478 BCL9LQ86UU0 1499 aa26.4■■□□□ 1.82
CNEP1R1-202ENST00000427478 IL6STP40189 918 aaPredicted RBP26.39■■□□□ 1.82
CNEP1R1-202ENST00000427478 ZNF594Q96JF6 807 aaPredicted RBP26.39■■□□□ 1.82
CNEP1R1-202ENST00000427478 RAD50Q92878 1312 aa26.39■■□□□ 1.82
CNEP1R1-202ENST00000427478 EPB41L2O43491 1005 aaKnown RBP26.39■■□□□ 1.81
CNEP1R1-202ENST00000427478 ANAPC15P60006 121 aa26.39■■□□□ 1.81
CNEP1R1-202ENST00000427478 ATG9AQ7Z3C6 839 aa26.39■■□□□ 1.81
CNEP1R1-202ENST00000427478 ZBTB38Q8NAP3 1195 aaPredicted RBP26.39■■□□□ 1.81
CNEP1R1-202ENST00000427478 HSP90AB3PQ58FF7 597 aa26.38■■□□□ 1.81
CNEP1R1-202ENST00000427478 RUFY2Q8WXA3 655 aa26.38■■□□□ 1.81
CNEP1R1-202ENST00000427478 ATP6V1AP38606 617 aa26.38■■□□□ 1.81
CNEP1R1-202ENST00000427478 DZIP3Q86Y13 1208 aaKnown RBP26.38■■□□□ 1.81
CNEP1R1-202ENST00000427478 LSG1Q9H089 658 aaKnown RBP26.38■■□□□ 1.81
CNEP1R1-202ENST00000427478 TBC1D2BQ9UPU7 963 aa26.38■■□□□ 1.81
CNEP1R1-202ENST00000427478 NLRP10Q86W26 655 aa26.37■■□□□ 1.81
CNEP1R1-202ENST00000427478 DBNDD2Q9BQY9 259 aa26.37■■□□□ 1.81
CNEP1R1-202ENST00000427478 HSPA4P34932 840 aa26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 VPS72Q15906 364 aa26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 LRRC24Q50LG9 513 aa26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 KIAA1211Q6ZU35 1233 aa26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 CICQ96RK0 1608 aaPredicted RBP26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 LOC102724428A0A0B4J2F2 783 aa26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 IL15P40933 162 aaPredicted RBP26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 NEK4P51957 841 aa26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 SIK1P57059 783 aa26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 RREB1Q92766 1687 aa26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 MYH3P11055 1940 aa26.36■■□□□ 1.81
CNEP1R1-202ENST00000427478 PALLDQ8WX93 1383 aa26.35■■□□□ 1.81
CNEP1R1-202ENST00000427478 EYA2O00167 538 aa26.35■■□□□ 1.81
CNEP1R1-202ENST00000427478 ATP5JP18859 108 aa26.35■■□□□ 1.81
CNEP1R1-202ENST00000427478 CCDC85AQ96PX6 553 aaPredicted RBP26.35■■□□□ 1.81
CNEP1R1-202ENST00000427478 FSD1Q9BTV5 496 aa26.35■■□□□ 1.81
CNEP1R1-202ENST00000427478 SYNE4Q8N205 404 aa26.35■■□□□ 1.81
CNEP1R1-202ENST00000427478 PLA2G12BQ9BX93 195 aa26.35■■□□□ 1.81
CNEP1R1-202ENST00000427478 KCNQ2O43526 872 aa26.34■■□□□ 1.81
CNEP1R1-202ENST00000427478 CCDC57Q2TAC2 916 aa26.34■■□□□ 1.81
CNEP1R1-202ENST00000427478 INTS5Q6P9B9 1019 aaKnown RBP26.34■■□□□ 1.81
CNEP1R1-202ENST00000427478 CCDC87Q9NVE4 849 aa26.34■■□□□ 1.81
CNEP1R1-202ENST00000427478 CIZ1Q9ULV3 898 aaPredicted RBP26.34■■□□□ 1.81
CNEP1R1-202ENST00000427478 CRKLP46109 303 aaKnown RBP26.33■■□□□ 1.81
CNEP1R1-202ENST00000427478 ERVV-1B6SEH8 477 aa26.33■■□□□ 1.81
CNEP1R1-202ENST00000427478 HIP1O00291 1037 aa26.33■■□□□ 1.81
CNEP1R1-202ENST00000427478 ITPK1Q13572 414 aa26.33■■□□□ 1.81
CNEP1R1-202ENST00000427478 IL17RAQ96F46 866 aa26.33■■□□□ 1.81
CNEP1R1-202ENST00000427478 EDC3Q96F86 508 aaKnown RBP26.33■■□□□ 1.81
CNEP1R1-202ENST00000427478 MYH14Q7Z406 1995 aaKnown RBP26.33■■□□□ 1.81
CNEP1R1-202ENST00000427478 CDHR2Q9BYE9 1310 aa26.33■■□□□ 1.81
CNEP1R1-202ENST00000427478 CIAO1O76071 339 aa26.32■■□□□ 1.8
CNEP1R1-202ENST00000427478 NMIQ13287 307 aaPredicted RBP26.32■■□□□ 1.8
CNEP1R1-202ENST00000427478 FAM227BQ96M60 508 aa26.32■■□□□ 1.8
CNEP1R1-202ENST00000427478 PUS3Q9BZE2 481 aaKnown RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms