RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 CKAP2LQ8IYA6 745 aa17.19■□□□□ 0.34
ERCC3-202ENST00000426778 IL17RAQ96F46 866 aa17.19■□□□□ 0.34
ERCC3-202ENST00000426778 TTC41PQ6P2S7 1318 aa17.18■□□□□ 0.34
ERCC3-202ENST00000426778 G3BP1Q13283 466 aaKnown RBP eCLIP17.18■□□□□ 0.34
ERCC3-202ENST00000426778 NECTIN1Q15223 517 aa17.18■□□□□ 0.34
ERCC3-202ENST00000426778 RUFY2Q8WXA3 655 aa17.18■□□□□ 0.34
ERCC3-202ENST00000426778 EPHA10Q5JZY3 1008 aa17.18■□□□□ 0.34
ERCC3-202ENST00000426778 ZSWIM6Q9HCJ5 1215 aa17.18■□□□□ 0.34
ERCC3-202ENST00000426778 BABAM1Q9NWV8 329 aa17.18■□□□□ 0.34
ERCC3-202ENST00000426778 GRM8O00222 908 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 ZKSCAN1P17029 563 aaPredicted RBP17.17■□□□□ 0.34
ERCC3-202ENST00000426778 ZC3H6P61129 1189 aaKnown RBP17.17■□□□□ 0.34
ERCC3-202ENST00000426778 SLFNL1Q499Z3 407 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 TTC6Q86TZ1 520 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 DDX11Q96FC9 970 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 LRRC2Q9BYS8 371 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 PDCL3Q9H2J4 239 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 SLC27A2O14975 620 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 LIG1P18858 919 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 VPS53Q5VIR6 699 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 CCDC129Q6ZRS4 1044 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 RIC3Q7Z5B4 369 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 GPATCH3Q96I76 525 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 TMEM87AQ8NBN3 555 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
ERCC3-202ENST00000426778 GCP02774 474 aa17.16■□□□□ 0.34
ERCC3-202ENST00000426778 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
ERCC3-202ENST00000426778 SEC62Q99442 399 aaKnown RBP17.16■□□□□ 0.34
ERCC3-202ENST00000426778 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-202ENST00000426778 IGKV5-2P06315 115 aa17.15■□□□□ 0.34
ERCC3-202ENST00000426778 CEBPZQ03701 1054 aaKnown RBP17.15■□□□□ 0.34
ERCC3-202ENST00000426778 CSPP1Q1MSJ5 1256 aa17.15■□□□□ 0.34
ERCC3-202ENST00000426778 LARP1Q6PKG0 1096 aaKnown RBP17.15■□□□□ 0.34
ERCC3-202ENST00000426778 JAK2O60674 1132 aa17.14■□□□□ 0.33
ERCC3-202ENST00000426778 KDM4AO75164 1064 aa17.14■□□□□ 0.33
ERCC3-202ENST00000426778 NOLC1Q14978 699 aaKnown RBP eCLIP17.14■□□□□ 0.33
ERCC3-202ENST00000426778 SASS6Q6UVJ0 657 aa17.14■□□□□ 0.33
ERCC3-202ENST00000426778 MYD88Q99836 296 aa17.14■□□□□ 0.33
ERCC3-202ENST00000426778 DNAJC2Q99543 621 aaKnown RBP17.14■□□□□ 0.33
ERCC3-202ENST00000426778 ATP6V1DQ9Y5K8 247 aa17.14■□□□□ 0.33
ERCC3-202ENST00000426778 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
ERCC3-202ENST00000426778 PTCD1O75127 700 aaKnown RBP17.14■□□□□ 0.33
ERCC3-202ENST00000426778 MCM5P33992 734 aa17.14■□□□□ 0.33
ERCC3-202ENST00000426778 MTX1Q13505 466 aa17.14■□□□□ 0.33
ERCC3-202ENST00000426778 LUZP1Q86V48 1076 aa17.14■□□□□ 0.33
ERCC3-202ENST00000426778 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
ERCC3-202ENST00000426778 MAP4K1Q92918 833 aa17.13■□□□□ 0.33
ERCC3-202ENST00000426778 PYCARDQ9ULZ3 195 aa17.13■□□□□ 0.33
ERCC3-202ENST00000426778 BLOC1S2Q6QNY1 142 aa17.13■□□□□ 0.33
ERCC3-202ENST00000426778 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
ERCC3-202ENST00000426778 XAGE3Q8WTP9 111 aa17.13■□□□□ 0.33
ERCC3-202ENST00000426778 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
ERCC3-202ENST00000426778 FUCA2Q9BTY2 467 aa17.13■□□□□ 0.33
ERCC3-202ENST00000426778 HOXB7P09629 217 aa17.12■□□□□ 0.33
ERCC3-202ENST00000426778 COPS6Q7L5N1 327 aa17.12■□□□□ 0.33
ERCC3-202ENST00000426778 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
ERCC3-202ENST00000426778 LINS1Q8NG48 757 aa17.12■□□□□ 0.33
ERCC3-202ENST00000426778 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
ERCC3-202ENST00000426778 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
ERCC3-202ENST00000426778 PDIA6Q15084 440 aa17.12■□□□□ 0.33
ERCC3-202ENST00000426778 N4BP2Q86UW6 1770 aaPredicted RBP17.11■□□□□ 0.33
ERCC3-202ENST00000426778 SLIT1O75093 1534 aa17.11■□□□□ 0.33
ERCC3-202ENST00000426778 A0A087WWV3 80 aa17.11■□□□□ 0.33
ERCC3-202ENST00000426778 KCNF1Q9H3M0 494 aa17.11■□□□□ 0.33
ERCC3-202ENST00000426778 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
ERCC3-202ENST00000426778 ANKARQ7Z5J8 1434 aa17.11■□□□□ 0.33
ERCC3-202ENST00000426778 EPB41L2O43491 1005 aaKnown RBP17.11■□□□□ 0.33
ERCC3-202ENST00000426778 TOB2Q14106 344 aaPredicted RBP17.11■□□□□ 0.33
ERCC3-202ENST00000426778 ERC1Q8IUD2 1116 aa17.11■□□□□ 0.33
ERCC3-202ENST00000426778 PIBF1Q8WXW3 757 aa17.1■□□□□ 0.33
ERCC3-202ENST00000426778 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
ERCC3-202ENST00000426778 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
ERCC3-202ENST00000426778 ZSCAN31Q96LW9 406 aaPredicted RBP17.1■□□□□ 0.33
ERCC3-202ENST00000426778 KRT85P78386 507 aa17.1■□□□□ 0.33
ERCC3-202ENST00000426778 TFCP2Q12800 502 aa17.1■□□□□ 0.33
ERCC3-202ENST00000426778 PRDM10Q9NQV6 1147 aa17.1■□□□□ 0.33
ERCC3-202ENST00000426778 NLRP2Q9NX02 1062 aa17.1■□□□□ 0.33
ERCC3-202ENST00000426778 TAOK2Q9UL54 1235 aa17.1■□□□□ 0.33
ERCC3-202ENST00000426778 USP16Q9Y5T5 823 aa17.1■□□□□ 0.33
ERCC3-202ENST00000426778 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
ERCC3-202ENST00000426778 GOLGA6L4A6NEF3 574 aa17.09■□□□□ 0.33
ERCC3-202ENST00000426778 HSP90B1P14625 803 aaKnown RBP17.09■□□□□ 0.33
ERCC3-202ENST00000426778 UVSSAQ2YD98 709 aa17.09■□□□□ 0.33
ERCC3-202ENST00000426778 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
ERCC3-202ENST00000426778 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
ERCC3-202ENST00000426778 KCNH5Q8NCM2 988 aa17.09■□□□□ 0.33
ERCC3-202ENST00000426778 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.33
ERCC3-202ENST00000426778 NAP1L2Q9ULW6 460 aaPredicted RBP17.09■□□□□ 0.33
ERCC3-202ENST00000426778 COL15A1P39059 1388 aa17.09■□□□□ 0.33
ERCC3-202ENST00000426778 DBNLQ9UJU6 430 aaKnown RBP17.09■□□□□ 0.33
ERCC3-202ENST00000426778 NFAT5O94916 1531 aa17.08■□□□□ 0.33
ERCC3-202ENST00000426778 A0A0G2JLW4 131 aa17.08■□□□□ 0.33
ERCC3-202ENST00000426778 RPS6KB1P23443 525 aa17.08■□□□□ 0.33
ERCC3-202ENST00000426778 SPATA32Q96LK8 384 aa17.08■□□□□ 0.33
ERCC3-202ENST00000426778 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.33
ERCC3-202ENST00000426778 NUP62CLQ9H1M0 184 aa17.08■□□□□ 0.33
ERCC3-202ENST00000426778 DDX21Q9NR30 783 aaKnown RBP eCLIP17.08■□□□□ 0.33
ERCC3-202ENST00000426778 NEURL1BA8MQ27 555 aa17.08■□□□□ 0.32
ERCC3-202ENST00000426778 PTGS1P23219 599 aa17.08■□□□□ 0.32
ERCC3-202ENST00000426778 TERF1P54274 439 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms