RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CCDC88AQ3V6T2 1871 aa28.73■■■□□ 2.19
PTCHD3P2-201ENST00000424937 STYK1Q6J9G0 422 aa28.73■■■□□ 2.19
PTCHD3P2-201ENST00000424937 MASTLQ96GX5 879 aa28.73■■■□□ 2.19
PTCHD3P2-201ENST00000424937 UTP14AQ9BVJ6 771 aaKnown RBP28.73■■■□□ 2.19
PTCHD3P2-201ENST00000424937 RIC3Q7Z5B4 369 aa28.72■■■□□ 2.19
PTCHD3P2-201ENST00000424937 NLRP10Q86W26 655 aa28.72■■■□□ 2.19
PTCHD3P2-201ENST00000424937 FER1L6Q2WGJ9 1857 aa28.7■■■□□ 2.19
PTCHD3P2-201ENST00000424937 DDX60Q8IY21 1712 aaKnown RBP28.7■■■□□ 2.19
PTCHD3P2-201ENST00000424937 KLRG2A4D1S0 409 aaPredicted RBP28.7■■■□□ 2.18
PTCHD3P2-201ENST00000424937 NPR1P16066 1061 aa28.7■■■□□ 2.18
PTCHD3P2-201ENST00000424937 CNKSR1Q969H4 720 aa28.7■■■□□ 2.18
PTCHD3P2-201ENST00000424937 RNF123Q5XPI4 1314 aa28.69■■■□□ 2.18
PTCHD3P2-201ENST00000424937 ATP5J2-PTCD1G3V325 749 aa28.68■■■□□ 2.18
PTCHD3P2-201ENST00000424937 VAMP4O75379 141 aa28.68■■■□□ 2.18
PTCHD3P2-201ENST00000424937 DDX58O95786 925 aaKnown RBP28.68■■■□□ 2.18
PTCHD3P2-201ENST00000424937 PRPF40BQ6NWY9 871 aaKnown RBP28.68■■■□□ 2.18
PTCHD3P2-201ENST00000424937 ZNF428Q96B54 188 aa28.68■■■□□ 2.18
PTCHD3P2-201ENST00000424937 ZNF219Q9P2Y4 722 aaPredicted RBP28.68■■■□□ 2.18
PTCHD3P2-201ENST00000424937 ADCY9O60503 1353 aa28.67■■■□□ 2.18
PTCHD3P2-201ENST00000424937 ZNF784Q8NCA9 323 aaPredicted RBP28.67■■■□□ 2.18
PTCHD3P2-201ENST00000424937 ISCA1Q9BUE6 129 aa28.67■■■□□ 2.18
PTCHD3P2-201ENST00000424937 TRMT112Q9UI30 125 aaKnown RBP28.67■■■□□ 2.18
PTCHD3P2-201ENST00000424937 SLC4A2P04920 1241 aa28.66■■■□□ 2.18
PTCHD3P2-201ENST00000424937 C21orf2O43822 256 aa28.65■■■□□ 2.18
PTCHD3P2-201ENST00000424937 CRY2Q49AN0 593 aa28.65■■■□□ 2.18
PTCHD3P2-201ENST00000424937 E9PSI1 815 aa28.64■■■□□ 2.18
PTCHD3P2-201ENST00000424937 RASSF7Q02833 373 aa28.64■■■□□ 2.18
PTCHD3P2-201ENST00000424937 G2E3Q7L622 706 aa28.64■■■□□ 2.18
PTCHD3P2-201ENST00000424937 RPGRQ92834 1020 aaKnown RBP28.64■■■□□ 2.18
PTCHD3P2-201ENST00000424937 MYD88Q99836 296 aa28.64■■■□□ 2.18
PTCHD3P2-201ENST00000424937 SH3TC1Q8TE82 1336 aa28.64■■■□□ 2.17
PTCHD3P2-201ENST00000424937 TIAM2Q8IVF5 1701 aa28.63■■■□□ 2.17
PTCHD3P2-201ENST00000424937 C3orf67Q6ZVT6 689 aa28.63■■■□□ 2.17
PTCHD3P2-201ENST00000424937 MAP3K2Q9Y2U5 619 aa28.63■■■□□ 2.17
PTCHD3P2-201ENST00000424937 SYNE4Q8N205 404 aa28.62■■■□□ 2.17
PTCHD3P2-201ENST00000424937 NLRP3Q96P20 1036 aa28.62■■■□□ 2.17
PTCHD3P2-201ENST00000424937 DICER1Q9UPY3 1922 aaKnown RBP28.61■■■□□ 2.17
PTCHD3P2-201ENST00000424937 PI4KAP2A4QPH2 592 aa28.61■■■□□ 2.17
PTCHD3P2-201ENST00000424937 HCLS1P14317 486 aaPredicted RBP28.61■■■□□ 2.17
PTCHD3P2-201ENST00000424937 FLIIQ13045 1269 aa28.61■■■□□ 2.17
PTCHD3P2-201ENST00000424937 KSR2Q6VAB6 950 aa28.61■■■□□ 2.17
PTCHD3P2-201ENST00000424937 PI4KAP1Q8N8J0 262 aa28.61■■■□□ 2.17
PTCHD3P2-201ENST00000424937 METTL22Q9BUU2 404 aaPredicted RBP28.61■■■□□ 2.17
PTCHD3P2-201ENST00000424937 ALDH1B1P30837 517 aa28.6■■■□□ 2.17
PTCHD3P2-201ENST00000424937 SLC10A5Q5PT55 438 aa28.6■■■□□ 2.17
PTCHD3P2-201ENST00000424937 C9orf131Q5VYM1 1079 aa28.6■■■□□ 2.17
PTCHD3P2-201ENST00000424937 TAF1P21675 1872 aa28.59■■■□□ 2.17
PTCHD3P2-201ENST00000424937 SLFN5Q08AF3 891 aa28.59■■■□□ 2.17
PTCHD3P2-201ENST00000424937 TRIM28Q13263 835 aaKnown RBP28.59■■■□□ 2.17
PTCHD3P2-201ENST00000424937 FAM89AQ96GI7 184 aa28.59■■■□□ 2.17
PTCHD3P2-201ENST00000424937 RNF181Q9P0P0 153 aa28.59■■■□□ 2.17
PTCHD3P2-201ENST00000424937 NFKBIEO00221 500 aa28.58■■■□□ 2.17
PTCHD3P2-201ENST00000424937 RTL5Q5HYW3 569 aaPredicted RBP28.58■■■□□ 2.17
PTCHD3P2-201ENST00000424937 SOGA3Q5TF21 947 aa28.58■■■□□ 2.17
PTCHD3P2-201ENST00000424937 CDCA7LQ96GN5 454 aa28.58■■■□□ 2.17
PTCHD3P2-201ENST00000424937 FKBP5Q13451 457 aaPredicted RBP28.57■■■□□ 2.16
PTCHD3P2-201ENST00000424937 RBM17Q96I25 401 aaKnown RBP28.57■■■□□ 2.16
PTCHD3P2-201ENST00000424937 MYH3P11055 1940 aa28.56■■■□□ 2.16
PTCHD3P2-201ENST00000424937 HOXA10P31260 410 aaPredicted RBP28.56■■■□□ 2.16
PTCHD3P2-201ENST00000424937 NEXNQ0ZGT2 675 aa28.55■■■□□ 2.16
PTCHD3P2-201ENST00000424937 CCDC93Q567U6 631 aa28.55■■■□□ 2.16
PTCHD3P2-201ENST00000424937 CCDC191Q8NCU4 936 aa28.55■■■□□ 2.16
PTCHD3P2-201ENST00000424937 C7orf43Q8WVR3 580 aa28.55■■■□□ 2.16
PTCHD3P2-201ENST00000424937 CWC25Q9NXE8 425 aaPredicted RBP28.55■■■□□ 2.16
PTCHD3P2-201ENST00000424937 LMNB1P20700 586 aa28.54■■■□□ 2.16
PTCHD3P2-201ENST00000424937 ZNF526Q8TF50 670 aaPredicted RBP28.54■■■□□ 2.16
PTCHD3P2-201ENST00000424937 CRAMP1Q96RY5 1269 aa28.54■■■□□ 2.16
PTCHD3P2-201ENST00000424937 PRELPP51888 382 aa28.53■■■□□ 2.16
PTCHD3P2-201ENST00000424937 OLFM4Q6UX06 510 aa28.53■■■□□ 2.16
PTCHD3P2-201ENST00000424937 ZBTB38Q8NAP3 1195 aaPredicted RBP28.53■■■□□ 2.16
PTCHD3P2-201ENST00000424937 TAOK3Q9H2K8 898 aa28.53■■■□□ 2.16
PTCHD3P2-201ENST00000424937 ABCC4O15439 1325 aa28.52■■■□□ 2.16
PTCHD3P2-201ENST00000424937 IRS4O14654 1257 aaPredicted RBP28.52■■■□□ 2.16
PTCHD3P2-201ENST00000424937 IGKV5-2P06315 115 aa28.52■■■□□ 2.16
PTCHD3P2-201ENST00000424937 LTBP3Q9NS15 1303 aa28.51■■■□□ 2.15
PTCHD3P2-201ENST00000424937 PPEF1O14829 653 aaPredicted RBP28.5■■■□□ 2.15
PTCHD3P2-201ENST00000424937 PCCAP05165 728 aaPredicted RBP28.5■■■□□ 2.15
PTCHD3P2-201ENST00000424937 CWF19L2Q2TBE0 894 aaKnown RBP28.5■■■□□ 2.15
PTCHD3P2-201ENST00000424937 DNAAF4Q8WXU2 420 aa28.5■■■□□ 2.15
PTCHD3P2-201ENST00000424937 JARID2Q92833 1246 aaPredicted RBP28.49■■■□□ 2.15
PTCHD3P2-201ENST00000424937 NEURL1BA8MQ27 555 aa28.48■■■□□ 2.15
PTCHD3P2-201ENST00000424937 HNRNPUQ00839 825 aaKnown RBP eCLIP28.48■■■□□ 2.15
PTCHD3P2-201ENST00000424937 DDX46Q7L014 1031 aaKnown RBP28.48■■■□□ 2.15
PTCHD3P2-201ENST00000424937 TRMT2AQ8IZ69 625 aaKnown RBP28.48■■■□□ 2.15
PTCHD3P2-201ENST00000424937 GPBP1L1Q9HC44 474 aaPredicted RBP28.48■■■□□ 2.15
PTCHD3P2-201ENST00000424937 SNED1Q8TER0 1413 aa28.47■■■□□ 2.15
PTCHD3P2-201ENST00000424937 LRRC37AA6NMS7 1700 aa28.46■■■□□ 2.15
PTCHD3P2-201ENST00000424937 F6X3S4 739 aa28.46■■■□□ 2.15
PTCHD3P2-201ENST00000424937 HSP90B1P14625 803 aaKnown RBP28.46■■■□□ 2.15
PTCHD3P2-201ENST00000424937 FKBP4Q02790 459 aaKnown RBP eCLIP28.46■■■□□ 2.15
PTCHD3P2-201ENST00000424937 SLC51AQ86UW1 340 aa28.46■■■□□ 2.15
PTCHD3P2-201ENST00000424937 RTKN2Q8IZC4 609 aa28.46■■■□□ 2.15
PTCHD3P2-201ENST00000424937 COL4A1P02462 1669 aa28.45■■■□□ 2.15
PTCHD3P2-201ENST00000424937 GRAPQ13588 217 aa28.45■■■□□ 2.14
PTCHD3P2-201ENST00000424937 GRAPLQ8TC17 118 aaPredicted RBP28.45■■■□□ 2.14
PTCHD3P2-201ENST00000424937 ZC3H4Q9UPT8 1303 aaKnown RBP28.44■■■□□ 2.14
PTCHD3P2-201ENST00000424937 SPEF2Q9C093 1822 aa28.44■■■□□ 2.14
PTCHD3P2-201ENST00000424937 SF3B3Q15393 1217 aaKnown RBP28.44■■■□□ 2.14
PTCHD3P2-201ENST00000424937 CC2D2BQ6DHV5 1058 aa28.44■■■□□ 2.14
PTCHD3P2-201ENST00000424937 CDHR2Q9BYE9 1310 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms